FFCP PHASE1:Hg19::chr14:74706150..74706155,+: Difference between revisions
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|ontology_enrichment_development_v019=UBERON:0003056;1.50e-14;3 | |ontology_enrichment_development_v019=UBERON:0003056;1.50e-14;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@VSX2 | |short_description=p1@VSX2 | ||
}} | }} |
Revision as of 17:12, 18 November 2012
Short description: | p1@VSX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_VSX2_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -19bp_to_ENST00000261980, NM_182894, uc001xpq.2_5end |
EntrezGene: | VSX2 |
HGNC: | 1975 |
UniProt: | P58304 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.80e-11 | 4 |
vertebrate lens cell | 2.80e-11 | 4 |
lens epithelial cell | 2.80e-11 | 4 |
embryonic stem cell | 3.22e-09 | 5 |
columnar/cuboidal epithelial cell | 7.03e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
eye | 7.83e-18 | 21 |
visual system | 7.83e-18 | 21 |
sense organ | 1.02e-15 | 24 |
sensory system | 1.02e-15 | 24 |
entire sense organ system | 1.02e-15 | 24 |
cuboidal epithelium | 2.80e-11 | 4 |
transparent eye structure | 2.80e-11 | 4 |
simple cuboidal epithelium | 2.80e-11 | 4 |
cranial placode | 2.80e-11 | 4 |
lens of camera-type eye | 2.80e-11 | 4 |
epithelium of lens | 2.80e-11 | 4 |
lens placode | 2.80e-11 | 4 |
lens vesicle | 2.80e-11 | 4 |
camera-type eye | 5.70e-09 | 20 |
simple eye | 5.70e-09 | 20 |
immature eye | 5.70e-09 | 20 |
ocular region | 5.70e-09 | 20 |
eyeball of camera-type eye | 5.70e-09 | 20 |
optic cup | 5.70e-09 | 20 |
optic vesicle | 5.70e-09 | 20 |
eye primordium | 5.70e-09 | 20 |
face | 3.04e-08 | 22 |
retina | 6.34e-08 | 6 |
photoreceptor array | 6.34e-08 | 6 |
posterior segment of eyeball | 6.34e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.