FFCP PHASE1:Hg19::chr2:131594446..131594472,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.30e-20!254;CL:0002076!9.61e-16!43;CL:0000223!3.00e-11!59;CL:0002368!3.40e-08!13;CL:0002251!1.11e-07!21;CL:0000082!1.80e-07!19 | |ontology_enrichment_celltype=CL:0000066!1.30e-20!254;CL:0002076!9.61e-16!43;CL:0000223!3.00e-11!59;CL:0002368!3.40e-08!13;CL:0002251!1.11e-07!21;CL:0000082!1.80e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.27e-12;42!CL:0002251;2.52e-10;20!CL:0002368;8.92e-09;13 | |ontology_enrichment_celltype_v019=CL:0002076;8.27e-12;42!CL:0002251;2.52e-10;20!CL:0002368;8.92e-09;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.42e-15,42;CL:0000066,3.41e-14,253;CL:0000223,6.62e-12,58;CL:0002251,3.77e-10,20;CL:0002368,1.21e-08,13 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.42e-10;82!CL:0000223;2.17e-07;58 | |ontology_enrichment_development_v019=UBERON:0006601;1.42e-10;82!CL:0000223;2.17e-07;58 | ||
|ontology_enrichment_disease=DOID:305!7.76e-21!106;DOID:0050687!5.78e-17!143;DOID:162!2.09e-10!235;DOID:14566!2.50e-10!239;DOID:1749!1.12e-07!14 | |ontology_enrichment_disease=DOID:305!7.76e-21!106;DOID:0050687!5.78e-17!143;DOID:162!2.09e-10!235;DOID:14566!2.50e-10!239;DOID:1749!1.12e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.68e-08;14 | |ontology_enrichment_disease_v019=DOID:1749;1.68e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,9.00e-11,106;DOID:1749,2.11e-08,14;DOID:0050687,3.29e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.02e-30!57;UBERON:0005068!4.02e-30!57;UBERON:0006241!4.02e-30!57;UBERON:0007135!4.02e-30!57;UBERON:0001017!7.36e-30!82;UBERON:0000924!1.20e-29!173;UBERON:0006601!1.20e-29!173;UBERON:0005743!1.23e-29!86;UBERON:0000073!3.02e-29!94;UBERON:0001016!3.02e-29!94;UBERON:0004121!8.03e-29!169;UBERON:0000033!3.61e-26!123;UBERON:0000955!1.13e-25!69;UBERON:0006238!1.13e-25!69;UBERON:0000153!1.30e-25!129;UBERON:0007811!1.30e-25!129;UBERON:0002616!2.78e-23!59;UBERON:0002346!2.19e-22!90;UBERON:0003075!1.03e-21!86;UBERON:0007284!1.03e-21!86;UBERON:0002780!1.27e-21!41;UBERON:0001890!1.27e-21!41;UBERON:0006240!1.27e-21!41;UBERON:0003080!1.06e-20!42;UBERON:0002020!1.54e-18!34;UBERON:0003528!1.54e-18!34;UBERON:0001893!2.38e-18!34;UBERON:0002791!7.88e-18!33;UBERON:0001869!7.71e-17!32;UBERON:0003056!1.32e-15!61;UBERON:0007023!2.33e-15!115;UBERON:0000062!1.20e-14!511;UBERON:0000922!4.15e-14!612;UBERON:0000064!7.64e-14!219;UBERON:0001004!6.38e-13!72;UBERON:0000956!3.30e-12!25;UBERON:0000203!3.30e-12!25;UBERON:0000475!3.60e-12!365;UBERON:0002050!6.21e-12!605;UBERON:0005423!6.21e-12!605;UBERON:0000923!1.13e-11!604;UBERON:0005291!1.13e-11!604;UBERON:0006598!1.13e-11!604;UBERON:0002532!1.13e-11!604;UBERON:0004119!5.03e-11!169;UBERON:0000925!5.03e-11!169;UBERON:0006595!5.03e-11!169;UBERON:0002619!5.27e-11!22;UBERON:0000468!5.56e-11!659;UBERON:0003076!1.23e-10!15;UBERON:0003057!1.23e-10!15;UBERON:0000065!2.90e-10!53;UBERON:0000481!6.82e-10!347;UBERON:0001007!7.34e-10!155;UBERON:0001555!7.34e-10!155;UBERON:0007026!7.34e-10!155;UBERON:0000467!7.70e-10!625;UBERON:0000072!1.01e-09!46;UBERON:0000480!1.04e-09!626;UBERON:0001950!1.53e-09!20;UBERON:0008947!1.78e-09!38;UBERON:0003258!1.78e-09!38;UBERON:0000464!3.77e-09!104;UBERON:0000477!5.78e-09!286;UBERON:0004111!6.28e-09!241;UBERON:0001041!7.43e-09!98;UBERON:0004732!2.15e-08!13;UBERON:0002308!4.17e-08!9;UBERON:0000125!4.17e-08!9;UBERON:0004733!4.28e-08!12;UBERON:0002028!4.28e-08!12;UBERON:0007277!4.28e-08!12;UBERON:0000063!7.85e-08!97;UBERON:0004921!8.53e-08!129;UBERON:0004185!8.53e-08!129;UBERON:0002420!9.57e-08!9;UBERON:0007245!9.57e-08!9;UBERON:0010009!9.57e-08!9;UBERON:0010011!9.57e-08!9;UBERON:0000454!9.57e-08!9;UBERON:0004802!1.80e-07!19;UBERON:0000115!1.80e-07!19;UBERON:0000077!1.81e-07!130;UBERON:0000483!7.10e-07!309;UBERON:0005178!7.73e-07!34;UBERON:0002224!7.73e-07!34;UBERON:0001048!7.84e-07!168;UBERON:0000466!9.90e-07!126 | |ontology_enrichment_uberon=UBERON:0001049!4.02e-30!57;UBERON:0005068!4.02e-30!57;UBERON:0006241!4.02e-30!57;UBERON:0007135!4.02e-30!57;UBERON:0001017!7.36e-30!82;UBERON:0000924!1.20e-29!173;UBERON:0006601!1.20e-29!173;UBERON:0005743!1.23e-29!86;UBERON:0000073!3.02e-29!94;UBERON:0001016!3.02e-29!94;UBERON:0004121!8.03e-29!169;UBERON:0000033!3.61e-26!123;UBERON:0000955!1.13e-25!69;UBERON:0006238!1.13e-25!69;UBERON:0000153!1.30e-25!129;UBERON:0007811!1.30e-25!129;UBERON:0002616!2.78e-23!59;UBERON:0002346!2.19e-22!90;UBERON:0003075!1.03e-21!86;UBERON:0007284!1.03e-21!86;UBERON:0002780!1.27e-21!41;UBERON:0001890!1.27e-21!41;UBERON:0006240!1.27e-21!41;UBERON:0003080!1.06e-20!42;UBERON:0002020!1.54e-18!34;UBERON:0003528!1.54e-18!34;UBERON:0001893!2.38e-18!34;UBERON:0002791!7.88e-18!33;UBERON:0001869!7.71e-17!32;UBERON:0003056!1.32e-15!61;UBERON:0007023!2.33e-15!115;UBERON:0000062!1.20e-14!511;UBERON:0000922!4.15e-14!612;UBERON:0000064!7.64e-14!219;UBERON:0001004!6.38e-13!72;UBERON:0000956!3.30e-12!25;UBERON:0000203!3.30e-12!25;UBERON:0000475!3.60e-12!365;UBERON:0002050!6.21e-12!605;UBERON:0005423!6.21e-12!605;UBERON:0000923!1.13e-11!604;UBERON:0005291!1.13e-11!604;UBERON:0006598!1.13e-11!604;UBERON:0002532!1.13e-11!604;UBERON:0004119!5.03e-11!169;UBERON:0000925!5.03e-11!169;UBERON:0006595!5.03e-11!169;UBERON:0002619!5.27e-11!22;UBERON:0000468!5.56e-11!659;UBERON:0003076!1.23e-10!15;UBERON:0003057!1.23e-10!15;UBERON:0000065!2.90e-10!53;UBERON:0000481!6.82e-10!347;UBERON:0001007!7.34e-10!155;UBERON:0001555!7.34e-10!155;UBERON:0007026!7.34e-10!155;UBERON:0000467!7.70e-10!625;UBERON:0000072!1.01e-09!46;UBERON:0000480!1.04e-09!626;UBERON:0001950!1.53e-09!20;UBERON:0008947!1.78e-09!38;UBERON:0003258!1.78e-09!38;UBERON:0000464!3.77e-09!104;UBERON:0000477!5.78e-09!286;UBERON:0004111!6.28e-09!241;UBERON:0001041!7.43e-09!98;UBERON:0004732!2.15e-08!13;UBERON:0002308!4.17e-08!9;UBERON:0000125!4.17e-08!9;UBERON:0004733!4.28e-08!12;UBERON:0002028!4.28e-08!12;UBERON:0007277!4.28e-08!12;UBERON:0000063!7.85e-08!97;UBERON:0004921!8.53e-08!129;UBERON:0004185!8.53e-08!129;UBERON:0002420!9.57e-08!9;UBERON:0007245!9.57e-08!9;UBERON:0010009!9.57e-08!9;UBERON:0010011!9.57e-08!9;UBERON:0000454!9.57e-08!9;UBERON:0004802!1.80e-07!19;UBERON:0000115!1.80e-07!19;UBERON:0000077!1.81e-07!130;UBERON:0000483!7.10e-07!309;UBERON:0005178!7.73e-07!34;UBERON:0002224!7.73e-07!34;UBERON:0001048!7.84e-07!168;UBERON:0000466!9.90e-07!126 | ||
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| ||
|short_description=p3@ARHGEF4 | |short_description=p3@ARHGEF4 | ||
}} | }} |
Revision as of 00:43, 20 November 2012
Short description: | p3@ARHGEF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ARHGEF4_5end |
Coexpression cluster: | C4126_salivary_astrocytoma_spinal_hippocampus_medulla_thalamus_amygdala |
Association with transcript: | -16bp_to_ENST00000526381_5end |
EntrezGene: | ARHGEF4 |
HGNC: | 684 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.42e-15 | 42 |
epithelial cell | 3.41e-14 | 253 |
endodermal cell | 6.62e-12 | 58 |
epithelial cell of alimentary canal | 3.77e-10 | 20 |
respiratory epithelial cell | 1.21e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.00e-11 | 106 |
squamous cell carcinoma | 2.11e-08 | 14 |
cell type cancer | 3.29e-07 | 143 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.