FFCP PHASE1:Hg19::chr12:4378920..4378934,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!3.54e-28!140;CL:0002087!1.49e-27!119;CL:0002031!1.57e-26!124;CL:0000988!3.43e-25!182;CL:0000037!4.21e-25!172;CL:0000566!4.21e-25!172;CL:0002032!3.02e-22!165;CL:0000837!3.02e-22!165;CL:0000838!1.75e-19!52;CL:0000542!8.51e-19!53;CL:0000051!8.51e-19!53;CL:0002057!9.92e-15!42;CL:0000860!6.57e-13!45;CL:0000791!3.41e-11!18;CL:0000789!3.41e-11!18;CL:0002420!3.41e-11!18;CL:0002419!3.41e-11!18;CL:0000790!3.41e-11!18;CL:0000084!6.11e-10!25;CL:0000827!6.11e-10!25;CL:0002009!1.15e-09!65;CL:0000557!2.01e-09!71;CL:0000766!5.33e-09!76;CL:0002194!1.17e-08!63;CL:0000576!1.17e-08!63;CL:0000040!1.17e-08!63;CL:0000559!1.17e-08!63;CL:0000945!1.53e-08!24;CL:0000826!1.53e-08!24;CL:0000839!3.68e-08!70;CL:0000763!2.49e-07!112;CL:0000049!2.49e-07!112 | |ontology_enrichment_celltype=CL:0000738!3.54e-28!140;CL:0002087!1.49e-27!119;CL:0002031!1.57e-26!124;CL:0000988!3.43e-25!182;CL:0000037!4.21e-25!172;CL:0000566!4.21e-25!172;CL:0002032!3.02e-22!165;CL:0000837!3.02e-22!165;CL:0000838!1.75e-19!52;CL:0000542!8.51e-19!53;CL:0000051!8.51e-19!53;CL:0002057!9.92e-15!42;CL:0000860!6.57e-13!45;CL:0000791!3.41e-11!18;CL:0000789!3.41e-11!18;CL:0002420!3.41e-11!18;CL:0002419!3.41e-11!18;CL:0000790!3.41e-11!18;CL:0000084!6.11e-10!25;CL:0000827!6.11e-10!25;CL:0002009!1.15e-09!65;CL:0000557!2.01e-09!71;CL:0000766!5.33e-09!76;CL:0002194!1.17e-08!63;CL:0000576!1.17e-08!63;CL:0000040!1.17e-08!63;CL:0000559!1.17e-08!63;CL:0000945!1.53e-08!24;CL:0000826!1.53e-08!24;CL:0000839!3.68e-08!70;CL:0000763!2.49e-07!112;CL:0000049!2.49e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.48e-22;18!CL:0000789;5.48e-22;18!CL:0002419;5.48e-22;18!CL:0000084;1.63e-19;25!CL:0000542;6.89e-15;53!CL:0000625;2.68e-13;11!CL:0002087;5.95e-12;104!CL:0000860;3.02e-10;33!CL:0002057;3.02e-10;33!CL:0000624;9.06e-09;6!CL:0000623;1.35e-07;3!CL:0000473;2.12e-07;39!CL:0000234;2.12e-07;39!CL:0000576;9.17e-07;48!CL:0000945;9.71e-07;24 | |ontology_enrichment_celltype_v019=CL:0000791;5.48e-22;18!CL:0000789;5.48e-22;18!CL:0002419;5.48e-22;18!CL:0000084;1.63e-19;25!CL:0000542;6.89e-15;53!CL:0000625;2.68e-13;11!CL:0002087;5.95e-12;104!CL:0000860;3.02e-10;33!CL:0002057;3.02e-10;33!CL:0000624;9.06e-09;6!CL:0000623;1.35e-07;3!CL:0000473;2.12e-07;39!CL:0000234;2.12e-07;39!CL:0000576;9.17e-07;48!CL:0000945;9.71e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.79e-31,115;CL:0000738,7.86e-30,136;CL:0002031,1.63e-29,120;CL:0000838,6.28e-28,52;CL:0000988,1.05e-27,177;CL:0000542,3.13e-27,53;CL:0000051,3.13e-27,53;CL:0000037,5.74e-26,168;CL:0002032,7.71e-23,161;CL:0000837,7.71e-23,161;CL:0000791,3.43e-22,18;CL:0000789,3.43e-22,18;CL:0002420,3.43e-22,18;CL:0002419,3.43e-22,18;CL:0000790,3.43e-22,18;CL:0000084,1.25e-19,25;CL:0000827,1.25e-19,25;CL:0000625,1.41e-13,11;CL:0000860,1.85e-11,42;CL:0002057,1.85e-11,42;CL:0000473,1.90e-09,48;CL:0000234,1.90e-09,48;CL:0000624,1.23e-08,6;CL:0002009,3.38e-08,61;CL:0000623,1.10e-07,3;CL:0000825,1.10e-07,3;CL:0000557,4.73e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000790;5.48e-22;18!CL:0000051;6.89e-15;53!CL:0002057;2.29e-09;42 | |ontology_enrichment_development_v019=CL:0000790;5.48e-22;18!CL:0000051;6.89e-15;53!CL:0002057;2.29e-09;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.00e-17!102;UBERON:0003061!2.00e-17!102;UBERON:0002193!2.09e-17!112;UBERON:0000178!9.59e-09!15;UBERON:0000179!9.59e-09!15;UBERON:0000463!9.59e-09!15;UBERON:0002371!2.87e-08!80;UBERON:0002405!1.09e-07!115;UBERON:0001474!8.16e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!2.00e-17!102;UBERON:0003061!2.00e-17!102;UBERON:0002193!2.09e-17!112;UBERON:0000178!9.59e-09!15;UBERON:0000179!9.59e-09!15;UBERON:0000463!9.59e-09!15;UBERON:0002371!2.87e-08!80;UBERON:0002405!1.09e-07!115;UBERON:0001474!8.16e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.39e-10;15!UBERON:0000179;6.39e-10;15!UBERON:0000463;6.39e-10;15!UBERON:0002390;6.72e-10;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;6.39e-10;15!UBERON:0000179;6.39e-10;15!UBERON:0000463;6.39e-10;15!UBERON:0002390;6.72e-10;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.92e-18,98;UBERON:0003061,2.92e-18,98;UBERON:0002193,1.08e-16,108;UBERON:0000178,3.06e-10,15;UBERON:0000179,3.06e-10,15;UBERON:0000463,3.06e-10,15;UBERON:0002405,3.45e-10,93;UBERON:0004177,1.54e-09,7;UBERON:0005057,1.54e-09,7;UBERON:0002370,3.33e-08,4;UBERON:0005058,3.33e-08,4;UBERON:0009113,3.33e-08,4;UBERON:0003295,3.33e-08,4;UBERON:0005562,3.33e-08,4;UBERON:0002371,3.49e-07,76 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,0,0,0,0,0,0.136874425072884,0,3.132949635666,2.8735206307481,3.14843125254717,0.393364276848904,0.767658796194425,1.54816123316076,0,0.30120591877825,0,0,0,1.76160263600908,1.10799081706375,1.60435557976113,1.73608696572681,0.223915474239924,0.32389366601898,0.257575567634187,0.145398238779565,0.377875943688809,0,1.16214518452842,4.52284676824008,4.02618282163635,1.1507695692886,1.0246428261164,0.709446689665756,1.72372840368309,8.39130088658974,4.06279459783025,0.376484679085209,1.63743690034707,0.674170453335254,0.918251677112708,1.28371610830437,1.91801137739712,0.329851300186716,0,0.426224750532694,0,1.70215567407342,0,2.51248665256743,3.65038042894141,2.82345498116652,0,0.736555271975129,0.632924774881769,0.211255286311942,0.425208599930087,0,0.673971786878971,0.300353785683013,0.32145117339416,0.285012743741249,0,0,1.75996244461323,0.546138611262131,0,0.426730222566507,0.800791974072025,0,1.32208974556972,0.954053754535364,1.70763890732835,0.587237189370939,0.382273228125229,1.32171328579026,0.560508562981536,0.526768169550154,1.37696839079683,2.35806457649499,2.46721798799411,4.84840836632966,1.30368906653436,1.89379122293893,0,3.00808233589969,0.589211814949674,1.77227115666897,0.812411591295047,4.22701355094728,4.1618991219161,1.80881695064044,3.86890024900188,4.05724320029073,1.77943875794473,0.802622484269139,5.22677619024884,2.26618685395132,2.29932296161153,1.03088233644789,1.26509846009751,1.27426165729639,0,1.90090408889675,1.35517607169996,1.4078527226986,3.74792179657038,1.65744076430812,0,1.41124720257313,2.40696176205157,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,1.09288586487763,0,0,0,0.930705723632056,0.476981248610684,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,1.20848795132744,0,2.4406205754817,0.367663080345869,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0,0.326923806226917,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,2.00763216772303,0.121973706129595,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,1.66659201285353,0.325808305310325,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.283550194484773,0,0,0,0,0,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,1.56919201590938,2.56139988262505,2.80315847317372,3.46526197955321,0.508189248444927,0,0,0.167516265334349,0.637938751653163,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.94142780736755,1.81436848265855,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0.0920809889358963,0,0,0,0,0.231046011313244,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,1.14853107599234,1.30012049207304,0,0,0,0.15350367472613,0,0.214840489736547,0.145016693914229,0.170453254832202,0,0.165284915360978,0,0.510450849978337,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.288666338176536,0,0,0,0.43050537267123,0,0,0,0,0.764637207142375,0.569647187174163,1.66762242820452,0.822724546172388,1.29694662238543,2.70015718619057,0,0.320472213382419,0,0,0,0,0,0,0.199579371432817,0.5745161103971,1.69338866179106,0,0,0,0,0,0.50787533340481,0.1605880751037,0,0,0,0,0,0,0,0,0,2.16364542780786,1.33228787199128,0,0,0.293016358543788,0,0.780103689942349,0,0,0,0.921482106297696,0,0.140669416410513,0,0,0,0.597743964753209,0.828851746593443,0,0,1.10776324914963,0,0,0,0,0,2.3948309234694,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0.31396051279005,0,0,0.19606253431774,0.167821586975843,0,0,0,0,0,0,0,0.176915129006678,0,5.33738031625119,2.34771483998355,2.8193926366473,0.067401132980677,0,0,5.47364367646998,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,1.31443677139657,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0,0,0.169346664131569,0.795229689809303,0.272406812223151,0.160753148465019,0,0,2.249738915515,1.5476039091159,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0.258565912723101,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0.496166021811951,1.18566979138767,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0.221858103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| ||
|short_description=p@chr12:4378920..4378934,+ | |short_description=p@chr12:4378920..4378934,+ | ||
}} | }} |
Revision as of 09:58, 20 November 2012
Short description: | p@chr12:4378920..4378934, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:4378920..4378934, + |
Coexpression cluster: | C2205_teratocarcinoma_Natural_CD8_mycosis_cord_diffuse_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.79e-31 | 115 |
leukocyte | 7.86e-30 | 136 |
hematopoietic lineage restricted progenitor cell | 1.63e-29 | 120 |
lymphoid lineage restricted progenitor cell | 6.28e-28 | 52 |
hematopoietic cell | 1.05e-27 | 177 |
lymphocyte | 3.13e-27 | 53 |
common lymphoid progenitor | 3.13e-27 | 53 |
hematopoietic stem cell | 5.74e-26 | 168 |
hematopoietic oligopotent progenitor cell | 7.71e-23 | 161 |
hematopoietic multipotent progenitor cell | 7.71e-23 | 161 |
mature alpha-beta T cell | 3.43e-22 | 18 |
alpha-beta T cell | 3.43e-22 | 18 |
immature T cell | 3.43e-22 | 18 |
mature T cell | 3.43e-22 | 18 |
immature alpha-beta T cell | 3.43e-22 | 18 |
T cell | 1.25e-19 | 25 |
pro-T cell | 1.25e-19 | 25 |
CD8-positive, alpha-beta T cell | 1.41e-13 | 11 |
classical monocyte | 1.85e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.85e-11 | 42 |
defensive cell | 1.90e-09 | 48 |
phagocyte | 1.90e-09 | 48 |
CD4-positive, alpha-beta T cell | 1.23e-08 | 6 |
macrophage dendritic cell progenitor | 3.38e-08 | 61 |
natural killer cell | 1.10e-07 | 3 |
pro-NK cell | 1.10e-07 | 3 |
granulocyte monocyte progenitor cell | 4.73e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.92e-18 | 98 |
blood island | 2.92e-18 | 98 |
hemolymphoid system | 1.08e-16 | 108 |
blood | 3.06e-10 | 15 |
haemolymphatic fluid | 3.06e-10 | 15 |
organism substance | 3.06e-10 | 15 |
immune system | 3.45e-10 | 93 |
hemopoietic organ | 1.54e-09 | 7 |
immune organ | 1.54e-09 | 7 |
thymus | 3.33e-08 | 4 |
hemolymphoid system gland | 3.33e-08 | 4 |
thymic region | 3.33e-08 | 4 |
pharyngeal gland | 3.33e-08 | 4 |
thymus primordium | 3.33e-08 | 4 |
bone marrow | 3.49e-07 | 76 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.