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MCL coexpression mm9:36: Difference between revisions

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|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0002193!9.11e-20!48;UBERON:0002405!9.11e-20!48;UBERON:0002390!3.09e-18!45;UBERON:0003061!3.09e-18!45;UBERON:0004177!2.53e-12!29;UBERON:0005057!2.53e-12!29;UBERON:0000077!1.01e-10!35;UBERON:0001004!9.91e-10!42;UBERON:0001041!1.34e-09!80;UBERON:0003408!1.53e-09!24;UBERON:0000065!2.25e-09!41;UBERON:0002370!3.54e-09!23;UBERON:0000974!3.54e-09!23;UBERON:0004807!3.54e-09!23;UBERON:0005058!3.54e-09!23;UBERON:0003351!3.54e-09!23;UBERON:0009113!3.54e-09!23;UBERON:0003295!3.54e-09!23;UBERON:0009722!3.54e-09!23;UBERON:0005562!3.54e-09!23;UBERON:0007690!3.54e-09!23;UBERON:0003081!1.12e-08!87;UBERON:0006562!1.12e-08!24;UBERON:0001557!1.12e-08!24;UBERON:0001042!1.12e-08!24;UBERON:0008814!1.12e-08!24;UBERON:0009145!1.12e-08!24;UBERON:0001007!6.00e-08!116;UBERON:0001555!6.00e-08!116;UBERON:0007026!6.00e-08!116;UBERON:0000926!7.69e-08!120;UBERON:0004120!7.69e-08!120;UBERON:0006603!7.69e-08!120;UBERON:0004119!1.10e-07!118;UBERON:0000925!1.10e-07!118;UBERON:0006595!1.10e-07!118;UBERON:0000072!2.09e-07!27;UBERON:0004921!2.10e-07!114;UBERON:0001474!6.01e-07!22;UBERON:0004765!6.01e-07!22;UBERON:0001434!6.01e-07!22;UBERON:0002371!9.44e-07!16
|ontology_enrichment_uberon=UBERON:0002193!9.11e-20!48;UBERON:0002405!9.11e-20!48;UBERON:0002390!3.09e-18!45;UBERON:0003061!3.09e-18!45;UBERON:0004177!2.53e-12!29;UBERON:0005057!2.53e-12!29;UBERON:0000077!1.01e-10!35;UBERON:0001004!9.91e-10!42;UBERON:0001041!1.34e-09!80;UBERON:0003408!1.53e-09!24;UBERON:0000065!2.25e-09!41;UBERON:0002370!3.54e-09!23;UBERON:0000974!3.54e-09!23;UBERON:0004807!3.54e-09!23;UBERON:0005058!3.54e-09!23;UBERON:0003351!3.54e-09!23;UBERON:0009113!3.54e-09!23;UBERON:0003295!3.54e-09!23;UBERON:0009722!3.54e-09!23;UBERON:0005562!3.54e-09!23;UBERON:0007690!3.54e-09!23;UBERON:0003081!1.12e-08!87;UBERON:0006562!1.12e-08!24;UBERON:0001557!1.12e-08!24;UBERON:0001042!1.12e-08!24;UBERON:0008814!1.12e-08!24;UBERON:0009145!1.12e-08!24;UBERON:0001007!6.00e-08!116;UBERON:0001555!6.00e-08!116;UBERON:0007026!6.00e-08!116;UBERON:0000926!7.69e-08!120;UBERON:0004120!7.69e-08!120;UBERON:0006603!7.69e-08!120;UBERON:0004119!1.10e-07!118;UBERON:0000925!1.10e-07!118;UBERON:0006595!1.10e-07!118;UBERON:0000072!2.09e-07!27;UBERON:0004921!2.10e-07!114;UBERON:0001474!6.01e-07!22;UBERON:0004765!6.01e-07!22;UBERON:0001434!6.01e-07!22;UBERON:0002371!9.44e-07!16
|tfbs_overrepresentation_for_novel_motifs=1.09887,1.80964,0.204195,0.0300216,0.348619,0.135681,0.917234,0.234305,0.708102,0.896949,0.289459,0.0573892,0.982045,0.0887332,0.353951,0,0.294492,0.0401353,0.547068,0.314544,0.117416,0.765346,0.0873939,0.230518,0.87853,0.74772,1.13959,0.100634,0.37186,0.428016,0.153779,0.641341,0.27354,1.33969,0.875697,0.293972,0.43566,0.417927,0.0189055,0.491331,0.0630873,0.168369,1.42498,0.163832,2.40895,0.630938,0.379406,0.519265,1.03332,1.0963,0.249279,0.196883,1.14146,0.355921,0.238571,0.0998303,0.210088,0.72026,1.66526,0.478928,0.400757,0.535778,1.47384,0.957941,0.685738,0.00678506,0.05479,0.320338,0.259635,0.178296,1.08129,0.576379,0.169651,0.0715165,0.866114,1.44164,0.391906,0.0636031,0.0385162,0.578183,0.210106,0.148186,0.0169752,1.24239,0.365843,0.247905,1.92789e-05,0.484412,0.851207,0.175281,0.220799,0.237417,0.132777,0.0109651,0.321174,0.0185172,0.461847,0.357366,0.275003,4.08823,0.0854848,0.0256477,0.18648,0.3601,0.356704,0.224544,0.291574,0.235401,0.146044,0.872809,0.537791,0.0959768,0.798303,0.122467,0.709992,0.166207,0.307877,0.205312,0.421435,0.541854,0.0242481,0.26289,0.0922297,0.239819,0.125041,0.510783,0.432121,0.483641,0.774105,0.42323,0.0814377,0.0878891,0.0431789,0.180402,1.12568,0.000852072,0.666506,0.384315,1.72601,0.426671,0.158044,0.522867,2.41598,0.343925,0.463403,0.473535,0.283446,0.395808,0.808366,0.100748,3.69386,0.560247,0.359411,2.59571,0.249238,0.091999,0.19942,0.131788,0.0771423,0.556837,0.401973,0.227217,0.241588,0.350173,0.00325436,0.307596,0.655588,0.806112,3.95416
}}
}}

Revision as of 17:40, 26 November 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr10:117298192..117298219,+p@chr10:117298192..117298219
+
Mm9::chr10:126512321..126512381,+p@chr10:126512321..126512381
+
Mm9::chr10:126759970..126759980,+p@chr10:126759970..126759980
+
Mm9::chr10:127528632..127528651,+p3@Baz2a
Mm9::chr10:127528652..127528680,+p2@Baz2a
Mm9::chr10:22021585..22021609,+p@chr10:22021585..22021609
+
Mm9::chr10:3430213..3430214,+p@chr10:3430213..3430214
+
Mm9::chr10:59853531..59853548,+p@chr10:59853531..59853548
+
Mm9::chr10:76993166..76993177,+p2@Itgb2
Mm9::chr10:79479441..79479478,+p1@Hmha1
Mm9::chr10:79479480..79479503,+p2@Hmha1
Mm9::chr10:79479506..79479513,+p4@Hmha1
Mm9::chr10:79479646..79479650,+p6@Hmha1
Mm9::chr10:79480412..79480432,+p@chr10:79480412..79480432
+
Mm9::chr10:79480437..79480454,+p@chr10:79480437..79480454
+
Mm9::chr10:80164556..80164623,-p1@Mob3a
Mm9::chr10:80962367..80962388,-p1@S1pr4
Mm9::chr10:80962431..80962458,-p3@S1pr4
Mm9::chr10:92587134..92587156,-p@chr10:92587134..92587156
-
Mm9::chr10:92587157..92587200,-p@chr10:92587157..92587200
-
Mm9::chr10:94292256..94292277,-p@chr10:94292256..94292277
-
Mm9::chr10:98704573..98704604,-p@chr10:98704573..98704604
-
Mm9::chr11:103032306..103032323,+p2@Fmnl1
Mm9::chr11:103032395..103032436,+p1@Fmnl1
Mm9::chr11:103043012..103043016,+p@chr11:103043012..103043016
+
Mm9::chr11:103205965..103206033,-p1@Arhgap27
Mm9::chr11:106020514..106020541,-p3@LOC632329
p3@Limd2
Mm9::chr11:106020714..106020765,-p2@LOC632329
p2@Limd2
Mm9::chr11:106020774..106020781,-p7@LOC632329
p9@Limd2
Mm9::chr11:106021415..106021482,-p1@LOC632329
p1@Limd2
Mm9::chr11:106134241..106134320,-p2@Smarcd2
Mm9::chr11:115337057..115337104,+p2@Armc7
Mm9::chr11:115337116..115337143,+p3@Armc7
Mm9::chr11:11586218..11586285,+p1@Ikzf1
Mm9::chr11:115938876..115938910,-p1@Unc13d
Mm9::chr11:115938920..115938946,-p2@Unc13d
Mm9::chr11:11665080..11665085,+p@chr11:11665080..11665085
+
Mm9::chr11:117643496..117643517,-p5@Tmc6
Mm9::chr11:117643595..117643651,+p1@Tmc8
Mm9::chr11:119251981..119251997,+p@chr11:119251981..119251997
+
Mm9::chr11:121090540..121090606,-p1@BC017643
Mm9::chr11:26493607..26493663,-p1@Vrk2
Mm9::chr11:31732115..31732136,+p@chr11:31732115..31732136
+
Mm9::chr11:3235815..3235839,-p@chr11:3235815..3235839
-
Mm9::chr11:32433290..32433301,+p2@Stk10
Mm9::chr11:32433309..32433335,+p1@Stk10
Mm9::chr11:32434116..32434123,-p@chr11:32434116..32434123
-
Mm9::chr11:34217775..34217780,-p@chr11:34217775..34217780
-
Mm9::chr11:34597352..34597402,-p1@Dock2
Mm9::chr11:34597459..34597492,+p@chr11:34597459..34597492
+
Mm9::chr11:4136414..4136436,+p2@Osm
Mm9::chr11:46050716..46050718,-p@chr11:46050716..46050718
-
Mm9::chr11:54336315..54336326,+p6@Rapgef6
Mm9::chr11:54336354..54336363,+p5@Rapgef6
Mm9::chr11:58791595..58791651,+p1@Trim11
Mm9::chr11:59041894..59041899,+p@chr11:59041894..59041899
+
Mm9::chr11:6420897..6420972,-p1@Myo1g
Mm9::chr11:6461109..6461129,+p4@Ccm2
Mm9::chr11:6461136..6461152,+p3@Ccm2
Mm9::chr11:65620712..65620729,+p1@Zkscan6
Mm9::chr11:69705613..69705617,-p@chr11:69705613..69705617
-
Mm9::chr11:69708289..69708314,-p@chr11:69708289..69708314
-
Mm9::chr11:69709000..69709022,-p2@Acap1
Mm9::chr11:69709025..69709062,-p1@Acap1
Mm9::chr11:70461377..70461406,+p6@Rnf167
Mm9::chr11:70461408..70461420,+p14@Rnf167
Mm9::chr11:70461434..70461450,+p13@Rnf167
Mm9::chr11:72774665..72774681,+p2@Atp2a3
Mm9::chr11:72774682..72774730,+p1@Atp2a3
Mm9::chr11:76307897..76307940,-p12@Abr
Mm9::chr11:79894430..79894503,-p1@Crlf3
Mm9::chr11:82880303..82880325,-p@chr11:82880303..82880325
-
Mm9::chr11:82930182..82930191,+p6@Slfn1
Mm9::chr11:82930290..82930299,+p5@Slfn1
Mm9::chr11:87551078..87551095,+p2@Supt4h1
Mm9::chr11:87569069..87569090,+p1@Mir142
Mm9::chr12:102267054..102267123,-p1@Ccdc88c
Mm9::chr12:102267226..102267252,-p3@Ccdc88c
Mm9::chr12:103606556..103606582,+p@chr12:103606556..103606582
+
Mm9::chr12:107248414..107248435,+p2@Vrk1
Mm9::chr12:110004074..110004114,-p@chr12:110004074..110004114
-
Mm9::chr12:111723827..111723878,-p@chr12:111723827..111723878
-
Mm9::chr12:112398401..112398412,+p@chr12:112398401..112398412
+
Mm9::chr12:3235489..3235522,+p1@1700012B15Rik
Mm9::chr12:32893424..32893437,-p2@Pik3cg
Mm9::chr12:32893474..32893548,-p1@Pik3cg
Mm9::chr12:33999154..33999193,+p3@Atxn7l1
Mm9::chr12:34000106..34000127,-p@chr12:34000106..34000127
-
Mm9::chr12:4233958..4233981,-p2@Cenpo
Mm9::chr12:60232460..60232482,+p1@Ctage5
Mm9::chr12:66066483..66066525,-p1@Klhl28
Mm9::chr12:77988032..77988070,+p3@LOC639541
p4@Fntb
Mm9::chr13:118000737..118000741,+p@chr13:118000737..118000741
+
Mm9::chr13:118023428..118023432,+p@chr13:118023428..118023432
+
Mm9::chr13:20182407..20182502,+p1@Elmo1
Mm9::chr13:31065892..31065916,-p2@Exoc2
Mm9::chr13:31065917..31065967,-p1@Exoc2
Mm9::chr13:46435596..46435613,+p@chr13:46435596..46435613
+
Mm9::chr13:49404586..49404626,-p2@Fgd3
Mm9::chr13:55471128..55471136,+p3@Rgs14
Mm9::chr13:55471142..55471174,+p1@Rgs14
Mm9::chr13:55546662..55546735,+p1@Grk6
Mm9::chr13:55548977..55549001,-p@chr13:55548977..55549001
-
Mm9::chr13:67627072..67627115,-p1@Zfp58
p1@Zfp87
Mm9::chr13:85429066..85429096,-p4@Rasa1
Mm9::chr14:121778160..121778220,-p2@Stk24
Mm9::chr14:26336837..26336848,-p@chr14:26336837..26336848
-
Mm9::chr14:35487338..35487391,+p4@Wapal
Mm9::chr14:56209822..56209843,+p@chr14:56209822..56209843
+
Mm9::chr14:70575204..70575250,-p2@Pdlim2
Mm9::chr15:100471942..100471952,-p@chr15:100471942..100471952
-
Mm9::chr15:100498035..100498036,-p@chr15:100498035..100498036
-
Mm9::chr15:100499927..100499942,-p1@ENSMUST00000100198
Mm9::chr15:100499943..100499960,-p2@ENSMUST00000100198
Mm9::chr15:63891871..63891880,-p7@Fam49b
Mm9::chr15:66392559..66392629,-p1@Tmem71
Mm9::chr15:66644247..66644272,-p1@Sla
Mm9::chr15:66644278..66644294,-p7@Sla
Mm9::chr15:76125218..76125251,+p2@Gm10345
Mm9::chr15:76125255..76125286,+p1@Gm10345
Mm9::chr15:78391628..78391657,+p@chr15:78391628..78391657
+
Mm9::chr15:78403184..78403220,-p2@Rac2
Mm9::chr15:79039673..79039693,+p1@Gm10863
Mm9::chr15:79245145..79245185,-p@chr15:79245145..79245185
-
Mm9::chr15:79569914..79569932,-p@chr15:79569914..79569932
-
Mm9::chr15:82730171..82730206,-p@chr15:82730171..82730206
-
Mm9::chr15:84155146..84155153,+p5@Parvg
Mm9::chr15:84155155..84155207,+p1@Parvg
Mm9::chr16:19968270..19968275,-p@chr16:19968270..19968275
-
Mm9::chr16:19983078..19983102,-p1@Klhl6
Mm9::chr16:19983125..19983140,-p2@Klhl6
Mm9::chr16:23988711..23988727,-p1@Bcl6
Mm9::chr16:36935118..36935136,+p2@Hcls1
Mm9::chr16:36948114..36948117,+p@chr16:36948114..36948117
+
Mm9::chr16:38522863..38522885,+p@chr16:38522863..38522885
+
Mm9::chr16:45158982..45159034,+p2@Atg3
Mm9::chr16:92826249..92826325,-p1@Runx1
Mm9::chr16:93832466..93832553,+p1@Morc3
Mm9::chr17:17761400..17761419,-p4@Lnpep
Mm9::chr17:17761422..17761460,-p1@Lnpep
Mm9::chr17:17762231..17762257,-p@chr17:17762231..17762257
-
Mm9::chr17:17762428..17762467,+p@chr17:17762428..17762467
+
Mm9::chr17:28344740..28344759,+p2@Def6
Mm9::chr17:28344765..28344838,+p1@Def6
Mm9::chr17:28345248..28345292,+p@chr17:28345248..28345292
+
Mm9::chr17:29144806..29144817,-p3@Stk38
Mm9::chr17:31694974..31695011,-p@chr17:31694974..31695011
-
Mm9::chr17:31695012..31695027,-p@chr17:31695012..31695027
-
Mm9::chr17:34726744..34726775,+p2@Gpsm3
Mm9::chr17:35331350..35331366,+p3@Ltb
Mm9::chr17:47638848..47638895,-p@chr17:47638848..47638895
-
Mm9::chr17:47732716..47732720,-p@chr17:47732716..47732720
-
Mm9::chr17:48439659..48439668,+p10@Treml2
Mm9::chr17:48439669..48439700,+p2@Treml2
Mm9::chr17:48439703..48439721,+p3@Treml2
Mm9::chr17:48439726..48439761,+p1@Treml2
Mm9::chr17:50609994..50610031,+p@chr17:50609994..50610031
+
Mm9::chr17:57217870..57217881,-p3@Dennd1c
Mm9::chr17:57217882..57217907,-p2@Dennd1c
Mm9::chr17:57217913..57217942,-p1@Dennd1c
Mm9::chr17:57217989..57218032,+p@chr17:57217989..57218032
+
Mm9::chr17:57418517..57418546,+p1@Vav1
Mm9::chr17:73187384..73187385,+p@chr17:73187384..73187385
+
Mm9::chr17:79281343..79281367,+p1@ENSMUST00000151064
Mm9::chr17:88840082..88840127,+p1@Foxn2
Mm9::chr18:10181324..10181354,-p9@Rock1
Mm9::chr18:10182160..10182177,-p4@Rock1
Mm9::chr18:10182181..10182221,-p2@Rock1
Mm9::chr18:67405102..67405143,-p2@Mppe1
Mm9::chr18:80904923..80904933,-p3@Nfatc1
Mm9::chr19:25182297..25182299,+p@chr19:25182297..25182299
+
Mm9::chr19:32285506..32285526,-p4@Sgms1
Mm9::chr19:34267178..34267213,+p3@Stambpl1
Mm9::chr19:34267222..34267233,+p8@Stambpl1
Mm9::chr19:4188756..4188761,-p@chr19:4188756..4188761
-
Mm9::chr19:4191035..4191069,-p1@Tbc1d10c
Mm9::chr19:4191076..4191083,-p4@Tbc1d10c
Mm9::chr19:4306010..4306044,-p2@Adrbk1
Mm9::chr19:4306215..4306369,-p1@Adrbk1
Mm9::chr19:46577370..46577402,+p@chr19:46577370..46577402
+
Mm9::chr19:47993759..47993795,-p1@Itprip
Mm9::chr19:54018553..54018586,+p4@Shoc2
Mm9::chr19:6341121..6341247,+p1@Map4k2
Mm9::chr19:6341423..6341486,+p2@Map4k2
Mm9::chr19:6341746..6341793,+p3@Map4k2
Mm9::chr19:6346411..6346425,+p4@Map4k2
Mm9::chr19:6932663..6932668,-p2@Ccdc88b
Mm9::chr19:6932669..6932708,-p1@Ccdc88b
Mm9::chr19:7093913..7093953,-p2@Fermt3
Mm9::chr1:133096666..133096722,-p1@Rassf5
Mm9::chr1:133534847..133534873,+p5@Ctse
Mm9::chr1:133534883..133534915,+p3@Ctse
Mm9::chr1:133534931..133534940,+p8@Ctse
Mm9::chr1:133534965..133534981,+p6@Ctse
Mm9::chr1:135957672..135957684,+p@chr1:135957672..135957684
+
Mm9::chr1:135974423..135974426,+p@chr1:135974423..135974426
+
Mm9::chr1:137029270..137029318,+p1@Ptpn7
Mm9::chr1:139997991..139997996,-p@chr1:139997991..139997996
-
Mm9::chr1:140015739..140015760,-p@chr1:140015739..140015760
-
Mm9::chr1:140020365..140020377,-p@chr1:140020365..140020377
-
Mm9::chr1:140071860..140071888,-p1@Ptprc
Mm9::chr1:154615119..154615124,+p@chr1:154615119..154615124
+
Mm9::chr1:161974695..161974721,+p1@ENSMUST00000168359
Mm9::chr1:161974735..161974752,+p3@4930523C07Rik
Mm9::chr1:165992201..165992229,+p1@Sell
Mm9::chr1:165992243..165992255,+p3@Sell
Mm9::chr1:167639909..167639925,-p5@Rcsd1
Mm9::chr1:173319051..173319066,+p4@Arhgap30
Mm9::chr1:173319086..173319173,+p1@Arhgap30
Mm9::chr1:173319199..173319230,+p3@Arhgap30
Mm9::chr1:173770703..173770729,+p2@Cd84
Mm9::chr1:183773165..183773181,-p@chr1:183773165..183773181
-
Mm9::chr1:183783314..183783324,-p1@ENSMUST00000070987
Mm9::chr1:183783399..183783410,+p@chr1:183783399..183783410
+
Mm9::chr1:195027629..195027778,-p1@Traf3ip3
Mm9::chr1:43990682..43990759,-p@chr1:43990682..43990759
-
Mm9::chr1:52065454..52065495,+p1@Stat4
Mm9::chr1:52857232..52857249,-p6@Inpp1
Mm9::chr1:53817617..53817621,-p@chr1:53817617..53817621
-
Mm9::chr1:54983137..54983148,-p2@Ankrd44
Mm9::chr1:54983155..54983246,-p1@Ankrd44
Mm9::chr1:55272374..55272418,-p@chr1:55272374..55272418
-
Mm9::chr1:58859438..58859481,+p3@Casp8
Mm9::chr1:75138366..75138377,-p11@1810031K17Rik
Mm9::chr1:75165320..75165346,+p3@Zfand2b
Mm9::chr1:87495371..87495397,-p1@Sp110
Mm9::chr2:11475520..11475588,-p2@Pfkfb3
Mm9::chr2:118549252..118549270,-p@chr2:118549252..118549270
-
Mm9::chr2:118554108..118554164,-p1@Plcb2
Mm9::chr2:118554314..118554366,-p2@Plcb2
Mm9::chr2:126325512..126325530,-p3@Atp8b4
Mm9::chr2:131845150..131845192,-p@chr2:131845150..131845192
-
Mm9::chr2:131845204..131845212,-p@chr2:131845204..131845212
-
Mm9::chr2:131846871..131846914,-p2@Rassf2
Mm9::chr2:155805270..155805319,+p2@Cep250
Mm9::chr2:156556383..156556426,+p@chr2:156556383..156556426
+
Mm9::chr2:156556442..156556463,+p@chr2:156556442..156556463
+
Mm9::chr2:158450639..158450666,+p1@Actr5
Mm9::chr2:163899858..163899954,+p1@Stk4
Mm9::chr2:163909913..163909938,+p@chr2:163909913..163909938
+
Mm9::chr2:174439588..174439614,-p@chr2:174439588..174439614
-
Mm9::chr2:180461466..180461471,-p@chr2:180461466..180461471
-
Mm9::chr2:181428604..181428692,-p1@Rgs19
Mm9::chr2:22629464..22629475,+p7@Apbb1ip
Mm9::chr2:22629837..22629857,+p4@Apbb1ip
Mm9::chr2:22629858..22629890,+p3@Apbb1ip
Mm9::chr2:22629893..22629944,+p1@Apbb1ip
Mm9::chr2:22724897..22724901,+p@chr2:22724897..22724901
+
Mm9::chr2:22895612..22895647,-p2@Abi1
Mm9::chr2:24240704..24240746,-p@chr2:24240704..24240746
-
Mm9::chr2:24240833..24240872,+p1@Psd4
Mm9::chr2:24240873..24240878,+p7@Psd4
Mm9::chr2:24242124..24242148,+p2@Psd4
Mm9::chr2:24242158..24242172,+p4@Psd4
Mm9::chr2:25321402..25321414,-p@chr2:25321402..25321414
-
Mm9::chr2:32576600..32576628,+p4@Sh2d3c
Mm9::chr2:32576629..32576660,+p2@Sh2d3c
Mm9::chr2:43604322..43604395,+p1@Arhgap15
Mm9::chr2:43750729..43750743,+p@chr2:43750729..43750743
+
Mm9::chr2:43885170..43885175,+p@chr2:43885170..43885175
+
Mm9::chr2:44015754..44015757,+p@chr2:44015754..44015757
+
Mm9::chr2:44016404..44016414,+p@chr2:44016404..44016414
+
Mm9::chr2:5635387..5635448,-p3@Camk1d
Mm9::chr2:58012525..58012539,-p1@Cytip
Mm9::chr2:6642652..6642675,-p1@Celf2
Mm9::chr2:6642683..6642694,-p14@Celf2
Mm9::chr2:73324492..73324508,-p5@Wipf1
Mm9::chr2:73324513..73324518,-p16@Wipf1
Mm9::chr2:91024134..91024180,-p3@Madd
Mm9::chr3:104668006..104668035,-p@chr3:104668006..104668035
-
Mm9::chr3:106285345..106285395,+p4@Dennd2d
Mm9::chr3:108003725..108003776,-p1@Cyb561d1
Mm9::chr3:84618505..84618580,+p@chr3:84618505..84618580
+
Mm9::chr3:88425066..88425095,+p1@Arhgef2
Mm9::chr3:95032758..95032769,+p4@Cdc42se1
Mm9::chr3:95086396..95086418,+p11@Fam63a
Mm9::chr4:106850901..106850943,-p1@2210012G02Rik
Mm9::chr4:11413094..11413111,+p2@1110037F02Rik
Mm9::chr4:122563287..122563311,-p2@Cap1
Mm9::chr4:133189334..133189440,-p1@Zdhhc18
Mm9::chr4:149072749..149072763,-p4@Pik3cd
Mm9::chr4:149072811..149072820,-p8@Pik3cd
Mm9::chr4:149943974..149944004,-p@chr4:149943974..149944004
-
Mm9::chr4:151822841..151822859,-p3@Kcnab2
Mm9::chr4:151822876..151822898,-p4@Kcnab2
Mm9::chr4:151822917..151822957,-p2@Kcnab2
Mm9::chr4:154302296..154302314,-p5@Tnfrsf14
Mm9::chr4:59562186..59562197,-p2@Rod1
Mm9::chr4:63064364..63064384,-p1@Akna
Mm9::chr4:63064395..63064410,-p2@Akna
Mm9::chr5:108150135..108150139,-p@chr5:108150135..108150139
-
Mm9::chr5:114280431..114280515,-p1@Selplg
Mm9::chr5:115223381..115223481,-p1@Git2
Mm9::chr5:117583576..117583658,+p2@Taok3
Mm9::chr5:143556399..143556461,-p@chr5:143556399..143556461
-
Mm9::chr5:54389934..54389946,+p4@Stim2
Mm9::chr5:65482837..65482855,-p1@Tmem156
Mm9::chr5:96590767..96590793,-p3@Cnot6l
Mm9::chr6:117850373..117850381,+p17@Hnrnpf
Mm9::chr6:117867010..117867024,+p3@Hnrnpf
Mm9::chr6:119429763..119429813,+p3@Fbxl14
Mm9::chr6:120413218..120413271,+p1@Il17ra
Mm9::chr6:124683085..124683138,-p1@Ptpn6
Mm9::chr6:124683139..124683163,-p2@Ptpn6
Mm9::chr6:124688868..124688895,-p10@Ptpn6
Mm9::chr6:134870730..134870744,+p2@Cdkn1b
Mm9::chr6:145070231..145070242,+p8@Lrmp
Mm9::chr6:145070247..145070268,+p3@Lrmp
Mm9::chr6:148160737..148160759,+p2@4732416N19Rik
Mm9::chr6:39155511..39155525,+p@chr6:39155511..39155525
+
Mm9::chr6:87482950..87482959,-p6@Arhgap25
Mm9::chr6:87482970..87482992,-p3@Arhgap25
Mm9::chr6:87483213..87483258,-p1@Arhgap25
Mm9::chr6:99385340..99385362,-p11@Foxp1
Mm9::chr6:99617424..99617442,-p@chr6:99617424..99617442
-
Mm9::chr7:107756070..107756132,+p2@Rab6a
Mm9::chr7:108004803..108004822,-p5@Relt
Mm9::chr7:133343929..133343982,-p1@Xpo6
Mm9::chr7:133728130..133728141,-p15@Cln3
p15@LOC100047702
Mm9::chr7:133844417..133844427,-p@chr7:133844417..133844427
-
Mm9::chr7:133847693..133847709,-p7@Coro1a
Mm9::chr7:133848250..133848276,-p1@Coro1a
Mm9::chr7:134160343..134160371,-p5@2900092E17Rik
Mm9::chr7:134234940..134234964,+p2@AI467606
Mm9::chr7:134361912..134361979,-p1@Sept1
Mm9::chr7:134439805..134439834,+p3@Itgal
Mm9::chr7:134439852..134439866,+p1@Itgal
Mm9::chr7:134439883..134439903,+p2@Itgal
Mm9::chr7:134622310..134622353,+p@chr7:134622310..134622353
+
Mm9::chr7:134716890..134716951,+p2@Phkg2
Mm9::chr7:140004817..140004845,-p7@Fam53b
Mm9::chr7:142843594..142843603,+p6@Ptpre
Mm9::chr7:150190963..150191010,+p3@Tspan32
Mm9::chr7:17428305..17428312,+p9@Prkd2
Mm9::chr7:25184693..25184746,+p2@1500002O20Rik
Mm9::chr7:25687846..25687863,-p@chr7:25687846..25687863
-
Mm9::chr7:25688030..25688099,+p1@Arhgef1
Mm9::chr7:29228972..29228981,+p@chr7:29228972..29228981
+
Mm9::chr7:29573958..29573961,+p2@Rinl
Mm9::chr7:29573974..29574005,+p1@Rinl
Mm9::chr7:31179541..31179571,-p@chr7:31179541..31179571
-
Mm9::chr7:31204821..31204891,-p1@Hcst
Mm9::chr7:52494745..52494757,-p8@Cd37
Mm9::chr7:52494762..52494780,-p6@Cd37
Mm9::chr7:88049946..88049967,-p2@Nmb
Mm9::chr7:89008197..89008212,-p@chr7:89008197..89008212
-
Mm9::chr7:90803823..90803942,-p1@Il16
Mm9::chr8:112217102..112217111,-p3@2400003C14Rik
Mm9::chr8:114060693..114060726,+p3@Znrf1
Mm9::chr8:114061461..114061470,-p@chr8:114061461..114061470
-
Mm9::chr8:114145586..114145592,+p@chr8:114145586..114145592
+
Mm9::chr8:26707472..26707510,-p3@Letm2
Mm9::chr8:27268496..27268530,-p@chr8:27268496..27268530
-
Mm9::chr8:3353321..3353332,+p7@A430078G23Rik
Mm9::chr8:3353338..3353352,+p4@A430078G23Rik
Mm9::chr8:3355675..3355686,-p@chr8:3355675..3355686
-
Mm9::chr8:72332571..72332641,+p1@Gmip
Mm9::chr8:72520139..72520157,-p6@Gatad2a
Mm9::chr8:73197097..73197166,+p2@Lsm4
Mm9::chr8:73796589..73796645,+p1@Myo9b
Mm9::chr8:91220983..91221007,+p2@Cyld
Mm9::chr9:110547832..110547858,-p3@Nbeal2
Mm9::chr9:121614640..121614657,-p3@Sec22c
Mm9::chr9:42274098..42274136,+p@chr9:42274098..42274136
+
Mm9::chr9:45753173..45753206,-p9@Sidt2
Mm9::chr9:55937744..55937756,+p5@Pstpip1
Mm9::chr9:55937773..55937794,+p2@Pstpip1
Mm9::chr9:55937795..55937814,+p3@Pstpip1
Mm9::chr9:55937882..55937896,+p7@Pstpip1
Mm9::chr9:55967452..55967456,+p@chr9:55967452..55967456
+
Mm9::chr9:57613012..57613042,+p@chr9:57613012..57613042
+
Mm9::chr9:57684520..57684612,-p1@Arid3b
Mm9::chr9:66441312..66441357,+p@chr9:66441312..66441357
+
Mm9::chr9:7873016..7873046,-p2@Birc3
Mm9::chr9:79640760..79640802,+p@chr9:79640760..79640802
+
Mm9::chr9:82868721..82868760,-p@chr9:82868721..82868760
-
Mm9::chrX:156065466..156065478,+p13@Sh3kbp1
Mm9::chrX:156065479..156065490,+p16@Sh3kbp1
Mm9::chrX:156382340..156382344,+p@chrX:156382340..156382344
+
Mm9::chrX:33428633..33428678,+p2@Dock11
Mm9::chrX:45496859..45496871,-p@chrX:45496859..45496871
-
Mm9::chrX:45499636..45499659,+p2@Sash3
Mm9::chrX:45499666..45499712,+p1@Sash3
Mm9::chrX:45499726..45499737,+p3@Sash3
Mm9::chrX:45807329..45807370,-p1@Elf4
Mm9::chrX:53851258..53851284,-p2@Mmgt1
Mm9::chrX:54591676..54591689,-p4@Arhgef6
Mm9::chrX:71156622..71156643,-p2@Arhgap4
Mm9::chrX:7667561..7667565,-p2@Was
Mm9::chrX:7667568..7667620,-p1@Was


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0030695GTPase regulator activity9.60069024222695e-12
GO:0007242intracellular signaling cascade4.96592236326085e-11
GO:0006796phosphate metabolic process5.69007184886453e-10
GO:0006793phosphorus metabolic process5.69007184886453e-10
GO:0043687post-translational protein modification1.01105146402042e-09
GO:0006468protein amino acid phosphorylation1.34747850057329e-08
GO:0016310phosphorylation3.31022314463866e-08
GO:0012501programmed cell death3.31022314463866e-08
GO:0002376immune system process3.35392106398924e-08
GO:0005083small GTPase regulator activity6.40931428681538e-08
GO:0005096GTPase activator activity6.40931428681538e-08
GO:0008219cell death8.26760275788842e-08
GO:0016265death8.47959355115573e-08
GO:0043412biopolymer modification1.14620597334351e-07
GO:0006464protein modification process1.47646668890361e-07
GO:0008047enzyme activator activity1.6401587268654e-07
GO:0009966regulation of signal transduction2.73279874345622e-07
GO:0006915apoptosis2.03030169218078e-06
GO:0016301kinase activity3.53536775124329e-06
GO:0046649lymphocyte activation5.04201234038593e-06
GO:0005085guanyl-nucleotide exchange factor activity5.0568969853915e-06
GO:0019992diacylglycerol binding5.46288007224109e-06
GO:0005515protein binding8.39525602692427e-06
GO:0048523negative regulation of cellular process8.7075393766611e-06
GO:0046578regulation of Ras protein signal transduction9.14159752996105e-06
GO:0045321leukocyte activation9.91185560266736e-06
GO:0001775cell activation2.02662945382274e-05
GO:0035023regulation of Rho protein signal transduction2.02662945382274e-05
GO:0050794regulation of cellular process2.39086718383889e-05
GO:0007265Ras protein signal transduction2.63517434722423e-05
GO:0005088Ras guanyl-nucleotide exchange factor activity2.63517434722423e-05
GO:0042110T cell activation2.94314319555051e-05
GO:0048519negative regulation of biological process4.40466049838481e-05
GO:0051056regulation of small GTPase mediated signal transduction4.5010971385828e-05
GO:0016772transferase activity, transferring phosphorus-containing groups8.01877965651401e-05
GO:0016773phosphotransferase activity, alcohol group as acceptor0.000101808172616602
GO:0032943mononuclear cell proliferation0.000101808172616602
GO:0046651lymphocyte proliferation0.000101808172616602
GO:0050789regulation of biological process0.000145453800378097
GO:0007266Rho protein signal transduction0.000163529718410785
GO:0005089Rho guanyl-nucleotide exchange factor activity0.000168802833046338
GO:0007264small GTPase mediated signal transduction0.000195429195080487
GO:0042098T cell proliferation0.000200383817706704
GO:0030029actin filament-based process0.000339895051862783
GO:0004674protein serine/threonine kinase activity0.000348324167385986
GO:0065007biological regulation0.000677743312153398
GO:0048534hemopoietic or lymphoid organ development0.000809440398580939
GO:0044260cellular macromolecule metabolic process0.00123912007359184
GO:0030036actin cytoskeleton organization and biogenesis0.00129140879918011
GO:0048468cell development0.00129140879918011
GO:0002520immune system development0.00132825258429391
GO:0030097hemopoiesis0.00173751321311094
GO:0044267cellular protein metabolic process0.00187866405307808
GO:0042981regulation of apoptosis0.00197248803086623
GO:0043067regulation of programmed cell death0.00214206907025535
GO:0019538protein metabolic process0.00222873526476404
GO:0009968negative regulation of signal transduction0.00249147798168532
GO:0046633alpha-beta T cell proliferation0.0025156128344762
GO:0046631alpha-beta T cell activation0.00263704908738666
GO:0005100Rho GTPase activator activity0.00397512038399187
GO:0030048actin filament-based movement0.00485794791326106
GO:0032502developmental process0.00492126764024058
GO:0005622intracellular0.00513077301497887
GO:0043066negative regulation of apoptosis0.00541938545713187
GO:0043069negative regulation of programmed cell death0.00578747949642075
GO:0004672protein kinase activity0.00651331911466173
GO:0002700regulation of production of molecular mediator of immune response0.00723065494077095
GO:0046934phosphatidylinositol-4,5-bisphosphate 3-kinase activity0.00723065494077095
GO:0007165signal transduction0.00738857755339257
GO:0007010cytoskeleton organization and biogenesis0.00801713170672124
GO:0002697regulation of immune effector process0.00868666014703643
GO:0005856cytoskeleton0.00882837652689101
GO:0030155regulation of cell adhesion0.00922143752294149
GO:0000902cell morphogenesis0.00964369539040416
GO:0032989cellular structure morphogenesis0.00964369539040416
GO:0008283cell proliferation0.00988716708871266
GO:0043283biopolymer metabolic process0.00995170648567971
GO:0008270zinc ion binding0.00995170648567971
GO:0005099Ras GTPase activator activity0.00995170648567971
GO:0005938cell cortex0.00995170648567971
GO:0048266behavioral response to pain0.0100832160563066
GO:0002521leukocyte differentiation0.011142112896585
GO:0008284positive regulation of cell proliferation0.0113481232832344
GO:0043524negative regulation of neuron apoptosis0.0131131461614718
GO:0045123cellular extravasation0.0140139519494546
GO:0004703G-protein coupled receptor kinase activity0.0140139519494546
GO:0005522profilin binding0.0140139519494546
GO:0050670regulation of lymphocyte proliferation0.0141286118102255
GO:0032944regulation of mononuclear cell proliferation0.0141286118102255
GO:0030098lymphocyte differentiation0.0149602667540727
GO:0018108peptidyl-tyrosine phosphorylation0.016811276372801
GO:0018212peptidyl-tyrosine modification0.016811276372801
GO:0030675Rac GTPase activator activity0.0180712628993188
GO:0002467germinal center formation0.0180712628993188
GO:0042127regulation of cell proliferation0.0205048809554274
GO:0030217T cell differentiation0.0221531625874148
GO:0004727prenylated protein tyrosine phosphatase activity0.0232256146258054
GO:0050863regulation of T cell activation0.0239706495900613
GO:0048869cellular developmental process0.0239706495900613
GO:0030154cell differentiation0.0239706495900613
GO:0043087regulation of GTPase activity0.0249951520417521
GO:0007154cell communication0.0252958471021514
GO:0050900leukocyte migration0.0256207315291405
GO:0016485protein processing0.0262155454216915
GO:0035004phosphoinositide 3-kinase activity0.0262155454216915
GO:0022407regulation of cell-cell adhesion0.0262155454216915
GO:00163031-phosphatidylinositol-3-kinase activity0.0262155454216915
GO:0046854phosphoinositide phosphorylation0.0262155454216915
GO:0051607defense response to virus0.0262155454216915
GO:0048522positive regulation of cellular process0.0262962600125354
GO:0046777protein amino acid autophosphorylation0.0280397816713004
GO:0005737cytoplasm0.0297839871090428
GO:0043523regulation of neuron apoptosis0.0297839871090428
GO:0005942phosphoinositide 3-kinase complex0.029891816505369
GO:0046834lipid phosphorylation0.029891816505369
GO:0007159leukocyte adhesion0.029891816505369
GO:0030183B cell differentiation0.0308061542389952
GO:0016540protein autoprocessing0.0308061542389952
GO:0050671positive regulation of lymphocyte proliferation0.0328665834981235
GO:0032946positive regulation of mononuclear cell proliferation0.0328665834981235
GO:0042802identical protein binding0.0338538766393764
GO:0016044membrane organization and biogenesis0.0364866839421309
GO:0006909phagocytosis0.0371687716551118
GO:0051402neuron apoptosis0.0371687716551118
GO:0005524ATP binding0.0388438935630497
GO:0030101natural killer cell activation0.0388536599643475
GO:0048265response to pain0.0388536599643475
GO:0007260tyrosine phosphorylation of STAT protein0.0388536599643475
GO:0045785positive regulation of cell adhesion0.0388536599643475
GO:0032559adenyl ribonucleotide binding0.0446661850611836
GO:0050798activated T cell proliferation0.0449931732158892
GO:0042129regulation of T cell proliferation0.0464705080131112
GO:0051249regulation of lymphocyte activation0.04706471371434
GO:0019899enzyme binding0.0480159975240116



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
hemolymphoid system9.11e-2048
immune system9.11e-2048
hematopoietic system3.09e-1845
blood island3.09e-1845
hemopoietic organ2.53e-1229
immune organ2.53e-1229
mixed endoderm/mesoderm-derived structure1.01e-1035
respiratory system9.91e-1042
foregut1.34e-0980
gland of gut1.53e-0924
respiratory tract2.25e-0941
thymus3.54e-0923
neck3.54e-0923
respiratory system epithelium3.54e-0923
hemolymphoid system gland3.54e-0923
pharyngeal epithelium3.54e-0923
thymic region3.54e-0923
pharyngeal gland3.54e-0923
entire pharyngeal arch endoderm3.54e-0923
thymus primordium3.54e-0923
early pharyngeal endoderm3.54e-0923
lateral plate mesoderm1.12e-0887
pharynx1.12e-0824
upper respiratory tract1.12e-0824
chordate pharynx1.12e-0824
pharyngeal arch system1.12e-0824
pharyngeal region of foregut1.12e-0824
digestive system6.00e-08116
digestive tract6.00e-08116
primitive gut6.00e-08116
mesoderm7.69e-08120
mesoderm-derived structure7.69e-08120
presumptive mesoderm7.69e-08120
endoderm-derived structure1.10e-07118
endoderm1.10e-07118
presumptive endoderm1.10e-07118
segment of respiratory tract2.09e-0727
subdivision of digestive tract2.10e-07114
bone element6.01e-0722
skeletal element6.01e-0722
skeletal system6.01e-0722
bone marrow9.44e-0716


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

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