FFCP PHASE1:Hg19::chr10:11303394..11303399,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C13|description=CAGE_peak_at_chr10:11303394..11303399,+|id=chr10:11303394..11303399,+|ontology_enrichment_celltype=CL:0000738!4.43e-36!140;CL:0000037!6.92e-36!172;CL:0000566!6.92e-36!172;CL:0002032!3.57e-34!165;CL:0000837!3.57e-34!165;CL:0000988!1.46e-32!182;CL:0002087!8.75e-30!119;CL:0002031!8.18e-28!124;CL:0000542!2.13e-17!53;CL:0000051!2.13e-17!53;CL:0000838!6.25e-17!52;CL:0000763!1.03e-16!112;CL:0000049!1.03e-16!112;CL:0000766!6.55e-15!76;CL:0000557!5.06e-12!71;CL:0000839!1.36e-11!70;CL:0002057!1.70e-11!42;CL:0002009!5.53e-11!65;CL:0002194!6.38e-11!63;CL:0000576!6.38e-11!63;CL:0000040!6.38e-11!63;CL:0000559!6.38e-11!63;CL:0000860!4.61e-10!45;CL:0000084!8.23e-10!25;CL:0000827!8.23e-10!25;CL:0002393!3.02e-09!9;CL:0002397!3.02e-09!9;CL:0000791!1.54e-08!18;CL:0000789!1.54e-08!18;CL:0002420!1.54e-08!18;CL:0002419!1.54e-08!18;CL:0000790!1.54e-08!18;CL:0000236!3.58e-07!14|ontology_enrichment_celltype_v019=CL:0000875;5.55e-11;3!CL:0002396;5.55e-11;3!CL:0002393;1.94e-09;6!CL:0002397;1.94e-09;6!CL:0000236;6.14e-09;13!CL:0000542;6.34e-08;53!CL:0002087;3.30e-07;104|ontology_enrichment_celltype_v019_2=CL:0000738,4.78e-20,136;CL:0000037,1.45e-19,168;CL:0002087,1.24e-18,115;CL:0000988,4.23e-18,177;CL:0002393,1.81e-17,9;CL:0002397,1.81e-17,9;CL:0002032,8.97e-17,161;CL:0000837,8.97e-17,161;CL:0002031,5.85e-16,120;CL:0000838,1.43e-11,52;CL:0000542,2.76e-11,53;CL:0000051,2.76e-11,53;CL:0000875,8.53e-11,3;CL:0002396,8.53e-11,3;CL:0000236,1.72e-08,14;CL:0000766,1.04e-07,72;CL:0000763,3.54e-07,108;CL:0000049,3.54e-07,108;CL:0000860,3.59e-07,42;CL:0002057,3.59e-07,42|ontology_enrichment_development_v019=CL:0000051;6.34e-08;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.85e-17!102;UBERON:0003061!3.85e-17!102;UBERON:0002193!5.54e-16!112;UBERON:0007023!3.93e-12!115;UBERON:0001893!2.15e-10!34;UBERON:0002791!4.38e-10!33;UBERON:0001869!7.89e-10!32;UBERON:0002020!8.07e-10!34;UBERON:0003528!8.07e-10!34;UBERON:0000178!1.65e-09!15;UBERON:0000179!1.65e-09!15;UBERON:0000463!1.65e-09!15;UBERON:0001950!3.51e-09!20;UBERON:0002371!3.65e-09!80;UBERON:0002619!4.12e-09!22;UBERON:0001049!5.11e-09!57;UBERON:0005068!5.11e-09!57;UBERON:0006241!5.11e-09!57;UBERON:0007135!5.11e-09!57;UBERON:0002780!5.95e-09!41;UBERON:0001890!5.95e-09!41;UBERON:0006240!5.95e-09!41;UBERON:0003080!1.53e-08!42;UBERON:0000956!2.38e-08!25;UBERON:0000203!2.38e-08!25;UBERON:0001474!3.95e-08!86;UBERON:0002405!4.52e-07!115|ontology_enrichment_uberon_v019=UBERON:0000178;2.24e-10;15!UBERON:0000179;2.24e-10;15!UBERON:0000463;2.24e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.71e-10,15;UBERON:0000179,3.71e-10,15;UBERON:0000463,3.71e-10,15;UBERON:0002390,2.43e-09,98;UBERON:0003061,2.43e-09,98;UBERON:0002193,4.65e-09,108|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0.376627918784408,0.305653622991805,0.246301768349837,0.393553906568396,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0,0.142169232487422,0,1.10799081706375,3.00816671205213,3.47217393145363,0.671746422719773,0,0,0.872389432677388,1.51150377475524,0.242584061187816,0,0,0.309706370895104,0.28769239232215,0.512321413058201,0.236482229888585,0.344745680736619,0,1.35426486594342,0.188242339542605,0.545812300115692,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0.598390972864896,0.426224750532694,0.580418477257168,0,0,1.25624332628372,0.521482918420201,0,0,0,0,0.633765858935825,1.06302149982522,0.838634582033504,0,1.05123824989054,0.64290234678832,1.14005097496499,2.78483348078726,2.00930569141097,3.51992488922645,1.63841583378639,0,0.853460445133014,0,3.4485146397269,0.661044872784862,0.954053754535364,2.84606484554724,1.76171156811282,1.91136614062614,0,1.12101712596307,0.526768169550154,2.16380747125216,5.50215067848831,0.822405995998037,0,0.32592226663359,1.89379122293893,0,0.334231370655521,0.589211814949674,0.886135578334485,1.35401931882508,1.92136979588513,1.30059347559878,1.80881695064044,1.65810010671509,0.579606171470105,1.77943875794473,1.87278579662799,2.09071047609954,0.226618685395132,0,1.71813722741315,0.759059076058509,0.318565414324097,0.651083453856419,0.950452044448374,0.301150238155546,0.127986611154418,0,0.947109008176067,0,1.41124720257313,2.67440195783507,2.75166367377318,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.196468613246569,0,0,0.97364218096405,0.522389211897802,0.26591592103773,1.19245312152671,0,1.48583000531826,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0.3649773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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_at_chr10:11303394..11303399,+ | |||
|id=chr10:11303394..11303399,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.43e-36!140;CL:0000037!6.92e-36!172;CL:0000566!6.92e-36!172;CL:0002032!3.57e-34!165;CL:0000837!3.57e-34!165;CL:0000988!1.46e-32!182;CL:0002087!8.75e-30!119;CL:0002031!8.18e-28!124;CL:0000542!2.13e-17!53;CL:0000051!2.13e-17!53;CL:0000838!6.25e-17!52;CL:0000763!1.03e-16!112;CL:0000049!1.03e-16!112;CL:0000766!6.55e-15!76;CL:0000557!5.06e-12!71;CL:0000839!1.36e-11!70;CL:0002057!1.70e-11!42;CL:0002009!5.53e-11!65;CL:0002194!6.38e-11!63;CL:0000576!6.38e-11!63;CL:0000040!6.38e-11!63;CL:0000559!6.38e-11!63;CL:0000860!4.61e-10!45;CL:0000084!8.23e-10!25;CL:0000827!8.23e-10!25;CL:0002393!3.02e-09!9;CL:0002397!3.02e-09!9;CL:0000791!1.54e-08!18;CL:0000789!1.54e-08!18;CL:0002420!1.54e-08!18;CL:0002419!1.54e-08!18;CL:0000790!1.54e-08!18;CL:0000236!3.58e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000875;5.55e-11;3!CL:0002396;5.55e-11;3!CL:0002393;1.94e-09;6!CL:0002397;1.94e-09;6!CL:0000236;6.14e-09;13!CL:0000542;6.34e-08;53!CL:0002087;3.30e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.78e-20,136;CL:0000037,1.45e-19,168;CL:0002087,1.24e-18,115;CL:0000988,4.23e-18,177;CL:0002393,1.81e-17,9;CL:0002397,1.81e-17,9;CL:0002032,8.97e-17,161;CL:0000837,8.97e-17,161;CL:0002031,5.85e-16,120;CL:0000838,1.43e-11,52;CL:0000542,2.76e-11,53;CL:0000051,2.76e-11,53;CL:0000875,8.53e-11,3;CL:0002396,8.53e-11,3;CL:0000236,1.72e-08,14;CL:0000766,1.04e-07,72;CL:0000763,3.54e-07,108;CL:0000049,3.54e-07,108;CL:0000860,3.59e-07,42;CL:0002057,3.59e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000051;6.34e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.85e-17!102;UBERON:0003061!3.85e-17!102;UBERON:0002193!5.54e-16!112;UBERON:0007023!3.93e-12!115;UBERON:0001893!2.15e-10!34;UBERON:0002791!4.38e-10!33;UBERON:0001869!7.89e-10!32;UBERON:0002020!8.07e-10!34;UBERON:0003528!8.07e-10!34;UBERON:0000178!1.65e-09!15;UBERON:0000179!1.65e-09!15;UBERON:0000463!1.65e-09!15;UBERON:0001950!3.51e-09!20;UBERON:0002371!3.65e-09!80;UBERON:0002619!4.12e-09!22;UBERON:0001049!5.11e-09!57;UBERON:0005068!5.11e-09!57;UBERON:0006241!5.11e-09!57;UBERON:0007135!5.11e-09!57;UBERON:0002780!5.95e-09!41;UBERON:0001890!5.95e-09!41;UBERON:0006240!5.95e-09!41;UBERON:0003080!1.53e-08!42;UBERON:0000956!2.38e-08!25;UBERON:0000203!2.38e-08!25;UBERON:0001474!3.95e-08!86;UBERON:0002405!4.52e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.24e-10;15!UBERON:0000179;2.24e-10;15!UBERON:0000463;2.24e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.71e-10,15;UBERON:0000179,3.71e-10,15;UBERON:0000463,3.71e-10,15;UBERON:0002390,2.43e-09,98;UBERON:0003061,2.43e-09,98;UBERON:0002193,4.65e-09,108 | |||
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| |||
|short_description=p@chr10:11303394..11303399,+ | |||
}} |
Revision as of 11:46, 10 September 2013
Short description: | p@chr10:11303394..11303399, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:11303394..11303399, + |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.78e-20 | 136 |
hematopoietic stem cell | 1.45e-19 | 168 |
nongranular leukocyte | 1.24e-18 | 115 |
hematopoietic cell | 4.23e-18 | 177 |
intermediate monocyte | 1.81e-17 | 9 |
CD14-positive, CD16-positive monocyte | 1.81e-17 | 9 |
hematopoietic oligopotent progenitor cell | 8.97e-17 | 161 |
hematopoietic multipotent progenitor cell | 8.97e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 5.85e-16 | 120 |
lymphoid lineage restricted progenitor cell | 1.43e-11 | 52 |
lymphocyte | 2.76e-11 | 53 |
common lymphoid progenitor | 2.76e-11 | 53 |
non-classical monocyte | 8.53e-11 | 3 |
CD14-low, CD16-positive monocyte | 8.53e-11 | 3 |
B cell | 1.72e-08 | 14 |
myeloid leukocyte | 1.04e-07 | 72 |
myeloid cell | 3.54e-07 | 108 |
common myeloid progenitor | 3.54e-07 | 108 |
classical monocyte | 3.59e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.59e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
blood | 3.71e-10 | 15 |
haemolymphatic fluid | 3.71e-10 | 15 |
organism substance | 3.71e-10 | 15 |
hematopoietic system | 2.43e-09 | 98 |
blood island | 2.43e-09 | 98 |
hemolymphoid system | 4.65e-09 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.