FFCP PHASE1:Hg19::chr10:3109689..3109693,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5214|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8878|TSSclassifier=S|UniProt=Q01813|association_with_transcript=-18bp_to_ENST00000381125,NM_002627_5end|description=CAGE_peak_4_at_PFKP_5end|id=chr10:3109689..3109693,+|ontology_enrichment_celltype=CL:1000497!8.94e-07!18;CL:0002518!8.94e-07!18|ontology_enrichment_celltype_v019=CL:0000239;6.11e-11;3!CL:1000615;6.11e-11;3!CL:0002306;6.11e-11;3!CL:1000449;5.25e-08;15!CL:0002681;2.70e-07;12!CL:0002584;2.70e-07;12!CL:1000497;5.56e-07;17!CL:0002518;5.56e-07;17|ontology_enrichment_celltype_v019_2=CL:0000239,5.07e-11,3;CL:1000615,5.07e-11,3;CL:0002306,5.07e-11,3;CL:1000449,4.24e-08,15;CL:0002681,2.54e-07,12;CL:0002584,2.54e-07,12;CL:1000497,4.63e-07,17;CL:0002518,4.63e-07,17|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000119!1.41e-10!312;UBERON:0000483!2.05e-10!309;UBERON:0000025!2.68e-07!194;UBERON:0000064!5.61e-07!219|ontology_enrichment_uberon_v019=UBERON:0006853;6.11e-11;3!UBERON:0007685;6.11e-11;3!UBERON:0004134;6.11e-11;3!UBERON:0006555;5.25e-08;15!UBERON:0004819;5.25e-08;15!UBERON:0001285;5.25e-08;15!UBERON:0007684;5.25e-08;15!UBERON:0001225;2.70e-07;12!UBERON:0008987;2.70e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0006853,5.07e-11,3;UBERON:0007685,5.07e-11,3;UBERON:0004134,5.07e-11,3;UBERON:0004211,4.24e-08,15;UBERON:0009773,4.24e-08,15;UBERON:0001231,4.24e-08,15;UBERON:0001285,4.24e-08,15;UBERON:0007684,4.24e-08,15;UBERON:0004208,4.24e-08,15;UBERON:0006555,1.51e-07,16;UBERON:0004819,1.51e-07,16;UBERON:0001225,2.54e-07,12;UBERON:0008987,2.54e-07,12|phase1_expression=0,0.214100523890983,0.281908808191942,1.0007329835313,0.446961094427288,0,2.53299878168311,0,0,0.982935746006035,6.28021051175185,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0.492484232307152,0.408001382488506,0.626909442956176,0.85870796139317,0.273748850145768,0.376627918784408,0.458480434487708,0.821005894499457,0.787107813136792,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0,0.0774672005803016,0.142169232487422,0.587200878669695,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0.411202997999018,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.541607727530031,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0.289648807765598,0,0,0.383587685530591,0,0,0,0,0,0.378139268656271,0.443458794925128,0.087834785693126,0.392937226493138,1.45718115317017,0,0,0.174129737299267,0.531831842075461,0,0,0,0.596287222100115,0,0.347140501607594,0,1.67799774483962,0.275118041940067,0.626984899610432,0,0.71153252537342,0.66944122552934,0.805658634218294,1.52054421143703,0.976248230192678,0.367663080345869,0,0.267899184852239,0.44905874525234,0.563057402416611,0,0.949265659568129,0.732806975721629,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0.573673241497627,0.709336764396714,0,2.1349799145941,0.74000264525148,0,0,0.653847612453835,0.151357427644931,0.576175924479999,0.468642863667593,0.624320153660641,1.71141546463335,1.04614076386261,0.587172493218824,0.161872944368132,0.280901613404497,0.408308342509787,0,0,0,0.247266929278557,0,0.718618141816238,0,0,0.554128230968366,0,0,0,0,0,0.427114777637135,0,0.900273288253207,0.412210116953756,0,0,0.675105328965065,0.487185025805993,0.504867548488229,0.368199594569197,0.161646056818812,0,0.604512589365842,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0.530119073285941,1.04574548582567,0.414644220061482,0.504641701751257,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0.473227200159376,0,0.482022059766964,0.441175890929576,0.217879444092406,0.237270619111097,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0,1.47008711385542,0,0,0,0.441463099414651,0,0.686271241194102,0,1.1240175325762,0.603173834469785,0.277765335475589,0,0,0,0.463721619900307,0.821860859650752,0.866198686566443,0.462985512576611,0.951270761172991,2.37061319387782,0.858486162094873,0.492434012174795,0.702012795417713,0.594524649154913,0,0,0.283550194484773,0.268675568108545,0.290633938513962,1.15014803749563,0,0.352193736052904,1.03664057770386,0.720599767084807,0.6312121671319,0.317489471460845,1.14596527667483,0,3.4214489204541,0.719792448923265,0.300343057843917,0,0,1.30788020649984,0.2933531432838,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,1.41849132023278,1.0656887160644,0,0,0,0.977208552881205,0.710783897485092,0.791951872933429,0,0.871533458600294,0.299918973546171,0,0,0,0.479249710983165,0,0,0,0.410952645100767,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8878 | |||
|TSSclassifier=S | |||
|UniProt=Q01813 | |||
|association_with_transcript=-18bp_to_ENST00000381125,NM_002627_5end | |||
|description=CAGE_peak_4_at_PFKP_5end | |||
|id=chr10:3109689..3109693,+ | |||
|ontology_enrichment_celltype=CL:1000497!8.94e-07!18;CL:0002518!8.94e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000239;6.11e-11;3!CL:1000615;6.11e-11;3!CL:0002306;6.11e-11;3!CL:1000449;5.25e-08;15!CL:0002681;2.70e-07;12!CL:0002584;2.70e-07;12!CL:1000497;5.56e-07;17!CL:0002518;5.56e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.07e-11,3;CL:1000615,5.07e-11,3;CL:0002306,5.07e-11,3;CL:1000449,4.24e-08,15;CL:0002681,2.54e-07,12;CL:0002584,2.54e-07,12;CL:1000497,4.63e-07,17;CL:0002518,4.63e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.41e-10!312;UBERON:0000483!2.05e-10!309;UBERON:0000025!2.68e-07!194;UBERON:0000064!5.61e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;6.11e-11;3!UBERON:0007685;6.11e-11;3!UBERON:0004134;6.11e-11;3!UBERON:0006555;5.25e-08;15!UBERON:0004819;5.25e-08;15!UBERON:0001285;5.25e-08;15!UBERON:0007684;5.25e-08;15!UBERON:0001225;2.70e-07;12!UBERON:0008987;2.70e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,5.07e-11,3;UBERON:0007685,5.07e-11,3;UBERON:0004134,5.07e-11,3;UBERON:0004211,4.24e-08,15;UBERON:0009773,4.24e-08,15;UBERON:0001231,4.24e-08,15;UBERON:0001285,4.24e-08,15;UBERON:0007684,4.24e-08,15;UBERON:0004208,4.24e-08,15;UBERON:0006555,1.51e-07,16;UBERON:0004819,1.51e-07,16;UBERON:0001225,2.54e-07,12;UBERON:0008987,2.54e-07,12 | |||
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| |||
|short_description=p4@PFKP | |||
}} |
Revision as of 13:09, 10 September 2013
Short description: | p4@PFKP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PFKP_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000381125, NM_002627_5end |
EntrezGene: | PFKP |
HGNC: | 8878 |
UniProt: | Q01813 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.07e-11 | 3 |
kidney cortex tubule cell | 5.07e-11 | 3 |
epithelial cell of proximal tubule | 5.07e-11 | 3 |
epithelial cell of nephron | 4.24e-08 | 15 |
kidney cortical cell | 2.54e-07 | 12 |
renal cortical epithelial cell | 2.54e-07 | 12 |
kidney cell | 4.63e-07 | 17 |
kidney epithelial cell | 4.63e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 5.07e-11 | 3 |
region of nephron tubule | 5.07e-11 | 3 |
proximal tubule | 5.07e-11 | 3 |
nephron epithelium | 4.24e-08 | 15 |
renal tubule | 4.24e-08 | 15 |
nephron tubule | 4.24e-08 | 15 |
nephron | 4.24e-08 | 15 |
uriniferous tubule | 4.24e-08 | 15 |
nephrogenic mesenchyme | 4.24e-08 | 15 |
excretory tube | 1.51e-07 | 16 |
kidney epithelium | 1.51e-07 | 16 |
cortex of kidney | 2.54e-07 | 12 |
renal parenchyma | 2.54e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.