FFCP PHASE1:Hg19::chr10:90974488..90974495,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C54|description=CAGE_peak_at_chr10:90974488..90974495,-|id=chr10:90974488..90974495,-|ontology_enrichment_celltype=CL:0002619!8.76e-07!3|ontology_enrichment_celltype_v019=CL:0000840;4.29e-28;5!CL:0002591;3.25e-19;1!CL:0000990;5.50e-19;8!CL:0000451;1.16e-15;10!CL:0000235;6.50e-13;6!CL:0002577;2.79e-07;3|ontology_enrichment_celltype_v019_2=CL:0000840,4.10e-28,5;CL:0001029,4.10e-28,5;CL:0002591,4.69e-19,1;CL:0000990,5.33e-19,8;CL:0000451,1.13e-15,10;CL:0000235,5.76e-13,6;CL:0002194,1.16e-07,59;CL:0000576,1.16e-07,59;CL:0000040,1.16e-07,59;CL:0000559,1.16e-07,59;CL:0002009,2.05e-07,61;CL:0002577,2.32e-07,3;CL:0000839,7.34e-07,66;CL:0000557,9.27e-07,67|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:4074;2.72e-10;2!DOID:4905;2.72e-10;2!DOID:3498;2.72e-10;2!DOID:0060084;2.79e-07;3!DOID:127;2.79e-07;3|ontology_enrichment_disease_v019_2=DOID:4074,2.99e-10,2;DOID:4905,2.99e-10,2;DOID:3498,2.99e-10,2;DOID:0060084,3.35e-07,3;DOID:127,3.35e-07,3|ontology_enrichment_uberon=UBERON:0002367!1.82e-08!11;UBERON:0010147!1.82e-08!11;UBERON:0009846!1.82e-08!11;UBERON:0003353!1.82e-08!11;UBERON:0004902!1.82e-08!11;UBERON:0003820!1.82e-08!11;UBERON:0009847!1.82e-08!11;UBERON:0003937!1.22e-07!12;UBERON:0005399!1.22e-07!12|ontology_enrichment_uberon_v019=UBERON:0000078;2.72e-10;2!UBERON:0002012;2.72e-10;2!UBERON:0008886;2.72e-10;2|ontology_enrichment_uberon_v019_2=UBERON:0000078,3.27e-10,2;UBERON:0007497,3.27e-10,2;UBERON:0003643,3.27e-10,2;UBERON:0003504,3.27e-10,2;UBERON:0003469,3.27e-10,2;UBERON:0003496,3.27e-10,2;UBERON:0002012,3.27e-10,2;UBERON:0008886,3.27e-10,2;UBERON:0007303,3.27e-10,2;UBERON:0002061,3.27e-10,2;UBERON:0005432,3.27e-10,2;UBERON:0004363,3.27e-10,2;UBERON:0004145,3.16e-07,3|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0.895661896959697,0.971680998056939,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,2.92092654289215,4.17911369518241,3.85578085504709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0.269421344139376,0,0.302714855289863,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,1.40402559083543,0.297262324577456,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.267096106940212,0.165284915360978,0.192190067365106,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.409499734223957,0.282810863907425,1.13008116620243,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.334330152832435,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0.0898683511473268,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0,1.21390189767046,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0.137041924646751,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0.13480708770837,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,0.358177682162975,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0.1239357642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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_at_chr10:90974488..90974495,- | |||
|id=chr10:90974488..90974495,- | |||
|ontology_enrichment_celltype=CL:0002619!8.76e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000840;4.29e-28;5!CL:0002591;3.25e-19;1!CL:0000990;5.50e-19;8!CL:0000451;1.16e-15;10!CL:0000235;6.50e-13;6!CL:0002577;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,4.10e-28,5;CL:0001029,4.10e-28,5;CL:0002591,4.69e-19,1;CL:0000990,5.33e-19,8;CL:0000451,1.13e-15,10;CL:0000235,5.76e-13,6;CL:0002194,1.16e-07,59;CL:0000576,1.16e-07,59;CL:0000040,1.16e-07,59;CL:0000559,1.16e-07,59;CL:0002009,2.05e-07,61;CL:0002577,2.32e-07,3;CL:0000839,7.34e-07,66;CL:0000557,9.27e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4074;2.72e-10;2!DOID:4905;2.72e-10;2!DOID:3498;2.72e-10;2!DOID:0060084;2.79e-07;3!DOID:127;2.79e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4074,2.99e-10,2;DOID:4905,2.99e-10,2;DOID:3498,2.99e-10,2;DOID:0060084,3.35e-07,3;DOID:127,3.35e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002367!1.82e-08!11;UBERON:0010147!1.82e-08!11;UBERON:0009846!1.82e-08!11;UBERON:0003353!1.82e-08!11;UBERON:0004902!1.82e-08!11;UBERON:0003820!1.82e-08!11;UBERON:0009847!1.82e-08!11;UBERON:0003937!1.22e-07!12;UBERON:0005399!1.22e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;2.72e-10;2!UBERON:0002012;2.72e-10;2!UBERON:0008886;2.72e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,3.27e-10,2;UBERON:0007497,3.27e-10,2;UBERON:0003643,3.27e-10,2;UBERON:0003504,3.27e-10,2;UBERON:0003469,3.27e-10,2;UBERON:0003496,3.27e-10,2;UBERON:0002012,3.27e-10,2;UBERON:0008886,3.27e-10,2;UBERON:0007303,3.27e-10,2;UBERON:0002061,3.27e-10,2;UBERON:0005432,3.27e-10,2;UBERON:0004363,3.27e-10,2;UBERON:0004145,3.16e-07,3 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0.895661896959697,0.971680998056939,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,2.92092654289215,4.17911369518241,3.85578085504709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0,0,0,0,0,0.269421344139376,0,0.302714855289863,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,1.40402559083543,0.297262324577456,0,0,0,0,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.267096106940212,0.165284915360978,0.192190067365106,0,0,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.409499734223957,0.282810863907425,1.13008116620243,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.334330152832435,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0.0898683511473268,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,1.22206028986725,0,0,0,0,0,0,0,0,1.21390189767046,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,0,0.137041924646751,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164831716762333,0.13480708770837,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0.233713309847224,0,0,0,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,0.358177682162975,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.59996218756479,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0.352675943690684,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0.0981477185010256,0,0.183428598521679,0,0,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0.315543124386369,0.0679914901909147,0,0,0.371995018166751,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr10:90974488..90974495,- | |||
}} |
Revision as of 14:53, 10 September 2013
Short description: | p@chr10:90974488..90974495, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:90974488..90974495, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 4.10e-28 | 5 |
common dendritic progenitor | 4.10e-28 | 5 |
smooth muscle cell of the pulmonary artery | 4.69e-19 | 1 |
conventional dendritic cell | 5.33e-19 | 8 |
dendritic cell | 1.13e-15 | 10 |
macrophage | 5.76e-13 | 6 |
monopoietic cell | 1.16e-07 | 59 |
monocyte | 1.16e-07 | 59 |
monoblast | 1.16e-07 | 59 |
promonocyte | 1.16e-07 | 59 |
macrophage dendritic cell progenitor | 2.05e-07 | 61 |
placental epithelial cell | 2.32e-07 | 3 |
myeloid lineage restricted progenitor cell | 7.34e-07 | 66 |
granulocyte monocyte progenitor cell | 9.27e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 3.27e-10 | 2 |
developing epithelial placode | 3.27e-10 | 2 |
respiratory system arterial blood vessel | 3.27e-10 | 2 |
respiratory system blood vessel | 3.27e-10 | 2 |
respiratory system artery | 3.27e-10 | 2 |
head blood vessel | 3.27e-10 | 2 |
pulmonary artery | 3.27e-10 | 2 |
pulmonary vascular system | 3.27e-10 | 2 |
pharyngeal vasculature | 3.27e-10 | 2 |
truncus arteriosus | 3.27e-10 | 2 |
aortic sac | 3.27e-10 | 2 |
pharyngeal arch artery | 3.27e-10 | 2 |
outflow tract | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 2.99e-10 | 2 |
pancreatic carcinoma | 2.99e-10 | 2 |
pancreatic ductal adenocarcinoma | 2.99e-10 | 2 |
cell type benign neoplasm | 3.35e-07 | 3 |
leiomyoma | 3.35e-07 | 3 |
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