FFCP PHASE1:Hg19::chr14:33408825..33408830,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:33408825..33408830,-|id=chr14:33408825..33408830,-|ontology_enrichment_celltype=CL:0000128!3.23e-07!7;CL:0000126!3.23e-07!7;CL:0000127!3.23e-07!7;CL:0002453!3.23e-07!7|ontology_enrichment_celltype_v019=CL:0000128;1.86e-15;7!CL:0000126;1.86e-15;7!CL:0000127;1.86e-15;7!CL:0002605;7.47e-10;3!CL:0002603;7.47e-10;3!CL:0002319;2.20e-08;25|ontology_enrichment_celltype_v019_2=CL:0000128,1.33e-15,7;CL:0000126,1.33e-15,7;CL:0000127,1.33e-15,7;CL:0002453,1.33e-15,7;CL:0002603,5.49e-10,3;CL:0002605,6.87e-10,3;CL:0002319,2.06e-08,25|ontology_enrichment_development_v019=UBERON:0005425;1.71e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!5.27e-16!86;UBERON:0000073!1.25e-15!94;UBERON:0001016!1.25e-15!94;UBERON:0002346!6.01e-15!90;UBERON:0003075!7.94e-15!86;UBERON:0007284!7.94e-15!86;UBERON:0000955!1.10e-14!69;UBERON:0006238!1.10e-14!69;UBERON:0001017!1.69e-14!82;UBERON:0001049!1.77e-14!57;UBERON:0005068!1.77e-14!57;UBERON:0006241!1.77e-14!57;UBERON:0007135!1.77e-14!57;UBERON:0003056!8.22e-14!61;UBERON:0000064!2.01e-13!219;UBERON:0002616!2.32e-13!59;UBERON:0001893!1.07e-12!34;UBERON:0003080!1.37e-12!42;UBERON:0000924!1.46e-12!173;UBERON:0006601!1.46e-12!173;UBERON:0002020!2.07e-12!34;UBERON:0003528!2.07e-12!34;UBERON:0002791!2.37e-12!33;UBERON:0004121!2.63e-12!169;UBERON:0002780!7.70e-12!41;UBERON:0001890!7.70e-12!41;UBERON:0006240!7.70e-12!41;UBERON:0001869!3.44e-11!32;UBERON:0000033!1.09e-10!123;UBERON:0000153!1.33e-10!129;UBERON:0007811!1.33e-10!129;UBERON:0000956!3.95e-10!25;UBERON:0000203!3.95e-10!25;UBERON:0000475!1.97e-08!365;UBERON:0001950!6.08e-08!20;UBERON:0002619!7.22e-08!22;UBERON:0000119!1.56e-07!312;UBERON:0000483!2.37e-07!309;UBERON:0007023!7.00e-07!115|ontology_enrichment_uberon_v019=UBERON:0005162;8.43e-15;2!UBERON:0000122;8.43e-15;2!UBERON:0000941;1.71e-08;1!UBERON:0001785;1.71e-08;1!UBERON:0002464;1.71e-08;1!UBERON:0004904;1.71e-08;1!UBERON:0001021;1.71e-08;1!UBERON:0002336;5.20e-08;1!UBERON:0011215;5.20e-08;1!UBERON:0001018;5.20e-08;1!UBERON:0002473;5.20e-08;1!UBERON:0005340;5.20e-08;1!UBERON:0003544;5.20e-08;1!UBERON:0005970;5.20e-08;1!UBERON:0002316;5.20e-08;1!UBERON:0001020;5.20e-08;1!UBERON:0002437;5.20e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0005162,1.12e-14,2;UBERON:0000122,1.12e-14,2;UBERON:0000941,1.77e-08,1;UBERON:0001785,1.77e-08,1;UBERON:0002464,1.77e-08,1;UBERON:0004904,1.77e-08,1;UBERON:0001021,1.77e-08,1;UBERON:0003902,1.77e-08,1;UBERON:0005425,1.77e-08,1;UBERON:0001016,2.68e-08,89;UBERON:0002336,6.63e-08,1;UBERON:0011215,6.63e-08,1;UBERON:0001018,6.63e-08,1;UBERON:0002473,6.63e-08,1;UBERON:0005340,6.63e-08,1;UBERON:0003544,6.63e-08,1;UBERON:0005970,6.63e-08,1;UBERON:0002316,6.63e-08,1;UBERON:0001020,6.63e-08,1;UBERON:0002437,6.63e-08,1;UBERON:0001017,8.46e-08,81|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.436882744260345,0.527533956456907,0,0.331397375727916,0,0.602694528023977,0,0,1.47745269692145,0.612002073732759,1.25381888591235,1.14494394852423,1.50561867580173,0.753255837568817,0,0,0,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,0,0,0,0,0.661743720148475,0.665188192387692,0.175669571386252,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0.264818361626438,0,0,0,1.06748995729705,0,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0.570471821544449,0.149448680551801,0.23486899728753,0.161872944368132,0,0,0.368502951935304,0.206651562351531,0,0,0.910161361938026,0,0,0.500474079487857,0,0,0,0.300476117813194,0,0,0.213557388818567,0,0.300091096084402,0.206105058476878,0,0.558350568994769,0,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0,0.365921118388786,0.397589304964456,0,0.518305275076852,0,0,0,1.28648187638577,0,0,0,0.236613600079688,0,0.241011029883482,0.330881918197182,0.217879444092406,0.474541238222193,0.134831308160164,0.196221465125346,0.769494313892781,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0.579652024875384,0.117408694235822,0.577465791044295,0,0,1.58040879591855,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0.571652865261156,0.112131084345361,0,0.1466765716419,0,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:33408825..33408830,- | |||
|id=chr14:33408825..33408830,- | |||
|ontology_enrichment_celltype=CL:0000128!3.23e-07!7;CL:0000126!3.23e-07!7;CL:0000127!3.23e-07!7;CL:0002453!3.23e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000128;1.86e-15;7!CL:0000126;1.86e-15;7!CL:0000127;1.86e-15;7!CL:0002605;7.47e-10;3!CL:0002603;7.47e-10;3!CL:0002319;2.20e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,1.33e-15,7;CL:0000126,1.33e-15,7;CL:0000127,1.33e-15,7;CL:0002453,1.33e-15,7;CL:0002603,5.49e-10,3;CL:0002605,6.87e-10,3;CL:0002319,2.06e-08,25 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.71e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.27e-16!86;UBERON:0000073!1.25e-15!94;UBERON:0001016!1.25e-15!94;UBERON:0002346!6.01e-15!90;UBERON:0003075!7.94e-15!86;UBERON:0007284!7.94e-15!86;UBERON:0000955!1.10e-14!69;UBERON:0006238!1.10e-14!69;UBERON:0001017!1.69e-14!82;UBERON:0001049!1.77e-14!57;UBERON:0005068!1.77e-14!57;UBERON:0006241!1.77e-14!57;UBERON:0007135!1.77e-14!57;UBERON:0003056!8.22e-14!61;UBERON:0000064!2.01e-13!219;UBERON:0002616!2.32e-13!59;UBERON:0001893!1.07e-12!34;UBERON:0003080!1.37e-12!42;UBERON:0000924!1.46e-12!173;UBERON:0006601!1.46e-12!173;UBERON:0002020!2.07e-12!34;UBERON:0003528!2.07e-12!34;UBERON:0002791!2.37e-12!33;UBERON:0004121!2.63e-12!169;UBERON:0002780!7.70e-12!41;UBERON:0001890!7.70e-12!41;UBERON:0006240!7.70e-12!41;UBERON:0001869!3.44e-11!32;UBERON:0000033!1.09e-10!123;UBERON:0000153!1.33e-10!129;UBERON:0007811!1.33e-10!129;UBERON:0000956!3.95e-10!25;UBERON:0000203!3.95e-10!25;UBERON:0000475!1.97e-08!365;UBERON:0001950!6.08e-08!20;UBERON:0002619!7.22e-08!22;UBERON:0000119!1.56e-07!312;UBERON:0000483!2.37e-07!309;UBERON:0007023!7.00e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;8.43e-15;2!UBERON:0000122;8.43e-15;2!UBERON:0000941;1.71e-08;1!UBERON:0001785;1.71e-08;1!UBERON:0002464;1.71e-08;1!UBERON:0004904;1.71e-08;1!UBERON:0001021;1.71e-08;1!UBERON:0002336;5.20e-08;1!UBERON:0011215;5.20e-08;1!UBERON:0001018;5.20e-08;1!UBERON:0002473;5.20e-08;1!UBERON:0005340;5.20e-08;1!UBERON:0003544;5.20e-08;1!UBERON:0005970;5.20e-08;1!UBERON:0002316;5.20e-08;1!UBERON:0001020;5.20e-08;1!UBERON:0002437;5.20e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,1.12e-14,2;UBERON:0000122,1.12e-14,2;UBERON:0000941,1.77e-08,1;UBERON:0001785,1.77e-08,1;UBERON:0002464,1.77e-08,1;UBERON:0004904,1.77e-08,1;UBERON:0001021,1.77e-08,1;UBERON:0003902,1.77e-08,1;UBERON:0005425,1.77e-08,1;UBERON:0001016,2.68e-08,89;UBERON:0002336,6.63e-08,1;UBERON:0011215,6.63e-08,1;UBERON:0001018,6.63e-08,1;UBERON:0002473,6.63e-08,1;UBERON:0005340,6.63e-08,1;UBERON:0003544,6.63e-08,1;UBERON:0005970,6.63e-08,1;UBERON:0002316,6.63e-08,1;UBERON:0001020,6.63e-08,1;UBERON:0002437,6.63e-08,1;UBERON:0001017,8.46e-08,81 | |||
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| |||
|short_description=p@chr14:33408825..33408830,- | |||
}} |
Revision as of 04:20, 11 September 2013
Short description: | p@chr14:33408825..33408830, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:33408825..33408830, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 1.33e-15 | 7 |
macroglial cell | 1.33e-15 | 7 |
astrocyte | 1.33e-15 | 7 |
oligodendrocyte precursor cell | 1.33e-15 | 7 |
astrocyte of the cerebellum | 5.49e-10 | 3 |
astrocyte of the cerebral cortex | 6.87e-10 | 3 |
neural cell | 2.06e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 1.12e-14 | 2 |
neuron projection bundle | 1.12e-14 | 2 |
cranial nerve II | 1.77e-08 | 1 |
cranial nerve | 1.77e-08 | 1 |
nerve trunk | 1.77e-08 | 1 |
nerve connecting eye with brain | 1.77e-08 | 1 |
nerve | 1.77e-08 | 1 |
retinal neural layer | 1.77e-08 | 1 |
presumptive neural retina | 1.77e-08 | 1 |
nervous system | 2.68e-08 | 89 |
corpus callosum | 6.63e-08 | 1 |
central nervous system cell part cluster | 6.63e-08 | 1 |
axon tract | 6.63e-08 | 1 |
intercerebral commissure | 6.63e-08 | 1 |
dorsal telencephalic commissure | 6.63e-08 | 1 |
brain white matter | 6.63e-08 | 1 |
brain commissure | 6.63e-08 | 1 |
white matter | 6.63e-08 | 1 |
nervous system commissure | 6.63e-08 | 1 |
cerebral hemisphere white matter | 6.63e-08 | 1 |
central nervous system | 8.46e-08 | 81 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.