FFCP PHASE1:Hg19::chr14:69726656..69726686,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=57452|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23233|TSSclassifier=S|UniProt=Q8N428,Q68VJ8|association_with_transcript=0bp_to_ENST00000337827,NM_001168368,NM_020692_5end|description=CAGE_peak_4_at_GALNTL1_5end|id=chr14:69726656..69726686,+|ontology_enrichment_celltype=CL:0002319!1.61e-10!25;CL:0000128!8.32e-09!7;CL:0000126!8.32e-09!7;CL:0000127!8.32e-09!7;CL:0002453!8.32e-09!7;CL:0000095!2.97e-08!17;CL:0000123!2.97e-08!17;CL:0000133!2.28e-07!59;CL:0000243!7.62e-07!15;CL:0000125!7.62e-07!15;CL:0000030!7.62e-07!15;CL:0000339!7.62e-07!15|ontology_enrichment_celltype_v019=CL:0000128;7.76e-14;7!CL:0000126;7.76e-14;7!CL:0000127;7.76e-14;7!CL:0002605;1.67e-12;3!CL:0002319;4.64e-08;25!CL:0000095;7.86e-07;17|ontology_enrichment_celltype_v019_2=CL:0000128,4.74e-14,7;CL:0000126,4.74e-14,7;CL:0000127,4.74e-14,7;CL:0002453,4.74e-14,7;CL:0002605,1.34e-12,3;CL:0002319,3.82e-08,25;CL:0000095,6.40e-07,17;CL:0000123,6.40e-07,17|ontology_enrichment_development_v019=UBERON:0006601;2.18e-12;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.89e-50!82;UBERON:0005743!5.80e-47!86;UBERON:0000073!3.59e-45!94;UBERON:0001016!3.59e-45!94;UBERON:0001049!1.25e-44!57;UBERON:0005068!1.25e-44!57;UBERON:0006241!1.25e-44!57;UBERON:0007135!1.25e-44!57;UBERON:0000955!2.20e-43!69;UBERON:0006238!2.20e-43!69;UBERON:0002616!1.72e-38!59;UBERON:0002346!9.56e-38!90;UBERON:0003075!1.07e-37!86;UBERON:0007284!1.07e-37!86;UBERON:0000924!4.48e-35!173;UBERON:0006601!4.48e-35!173;UBERON:0007023!1.05e-34!115;UBERON:0004121!1.41e-34!169;UBERON:0001869!3.44e-34!32;UBERON:0002020!1.30e-33!34;UBERON:0003528!1.30e-33!34;UBERON:0001893!1.30e-33!34;UBERON:0002791!1.44e-32!33;UBERON:0000153!2.08e-30!129;UBERON:0007811!2.08e-30!129;UBERON:0003080!3.11e-30!42;UBERON:0000033!3.75e-30!123;UBERON:0002780!3.58e-29!41;UBERON:0001890!3.58e-29!41;UBERON:0006240!3.58e-29!41;UBERON:0000956!5.56e-27!25;UBERON:0000203!5.56e-27!25;UBERON:0002619!2.21e-23!22;UBERON:0003056!2.28e-21!61;UBERON:0001950!3.89e-21!20;UBERON:0003076!2.15e-15!15;UBERON:0003057!2.15e-15!15;UBERON:0000475!1.34e-14!365;UBERON:0004732!8.15e-14!13;UBERON:0004733!9.27e-13!12;UBERON:0002028!9.27e-13!12;UBERON:0007277!9.27e-13!12;UBERON:0000025!5.89e-12!194;UBERON:0004111!6.96e-11!241;UBERON:0000064!9.17e-11!219;UBERON:0002680!2.11e-10!9;UBERON:0001895!2.11e-10!9;UBERON:0010092!2.11e-10!9;UBERON:0000477!6.96e-10!286;UBERON:0000062!3.77e-09!511;UBERON:0002420!2.39e-08!9;UBERON:0007245!2.39e-08!9;UBERON:0010009!2.39e-08!9;UBERON:0010011!2.39e-08!9;UBERON:0000454!2.39e-08!9;UBERON:0000119!2.78e-08!312;UBERON:0000483!3.41e-08!309;UBERON:0002308!4.04e-08!9;UBERON:0000125!4.04e-08!9;UBERON:0000200!6.64e-08!6;UBERON:0002037!1.13e-07!6;UBERON:0006215!1.13e-07!6;UBERON:0001871!1.98e-07!7;UBERON:0000349!6.05e-07!5;UBERON:0002021!6.50e-07!5;UBERON:0000468!8.60e-07!659;UBERON:0001872!8.85e-07!5|ontology_enrichment_uberon_v019=UBERON:0001869;2.32e-58;32!UBERON:0002791;2.79e-55;32!UBERON:0003528;2.87e-53;34!UBERON:0002020;2.87e-53;34!UBERON:0001893;3.25e-52;34!UBERON:0000956;7.72e-52;25!UBERON:0000203;7.72e-52;25!UBERON:0002619;9.49e-42;22!UBERON:0001950;2.29e-35;20!UBERON:0002780;1.41e-33;41!UBERON:0001890;1.41e-33;41!UBERON:0000073;2.57e-25;53!UBERON:0002616;2.57e-25;53!UBERON:0000955;1.77e-23;68!UBERON:0001017;8.46e-20;75!UBERON:0001016;1.55e-18;83!UBERON:0000200;6.40e-15;6!UBERON:0000349;1.73e-12;5!UBERON:0001872;8.63e-12;5!UBERON:0002021;8.63e-12;5!UBERON:0001870;1.83e-11;3!UBERON:0002420;2.51e-10;9!UBERON:0007245;2.51e-10;9!UBERON:0010009;2.51e-10;9!UBERON:0010011;2.51e-10;9!UBERON:0000454;2.51e-10;9!UBERON:0000125;4.33e-10;9!UBERON:0002308;4.33e-10;9!UBERON:0001829;3.16e-09;2!UBERON:0000369;4.91e-09;4!UBERON:0002435;4.91e-09;4!UBERON:0000204;4.91e-09;4!UBERON:0009663;1.10e-08;7!UBERON:0001954;1.20e-08;2!UBERON:0003022;1.20e-08;2!UBERON:0002421;1.20e-08;2!UBERON:0002600;1.20e-08;2!UBERON:0002702;3.36e-08;2!UBERON:0007023;3.41e-08;114!UBERON:0011216;1.10e-07;132!UBERON:0004732;4.54e-07;13!UBERON:0002680;5.64e-07;9!UBERON:0001895;5.64e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.49e-64,32;UBERON:0003528,3.02e-60,34;UBERON:0002020,3.02e-60,34;UBERON:0001893,3.83e-60,34;UBERON:0002791,3.99e-59,32;UBERON:0000956,1.58e-52,25;UBERON:0000203,1.58e-52,25;UBERON:0001049,2.17e-51,56;UBERON:0005068,2.17e-51,56;UBERON:0006241,2.17e-51,56;UBERON:0007135,2.17e-51,56;UBERON:0000073,5.44e-51,53;UBERON:0002616,5.44e-51,53;UBERON:0001017,7.15e-50,81;UBERON:0001016,7.78e-50,89;UBERON:0002780,4.90e-49,41;UBERON:0001890,4.90e-49,41;UBERON:0003080,4.90e-49,41;UBERON:0006240,4.90e-49,41;UBERON:0000955,7.98e-47,68;UBERON:0006238,7.98e-47,68;UBERON:0002619,2.46e-42,22;UBERON:0003075,4.35e-38,82;UBERON:0007284,4.35e-38,82;UBERON:0003056,6.30e-37,61;UBERON:0001950,4.87e-36,20;UBERON:0002346,5.74e-36,86;UBERON:0010371,1.22e-30,104;UBERON:0004121,1.17e-28,171;UBERON:0000924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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=57452 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23233 | |||
|TSSclassifier=S | |||
|UniProt=Q8N428,Q68VJ8 | |||
|association_with_transcript=0bp_to_ENST00000337827,NM_001168368,NM_020692_5end | |||
|description=CAGE_peak_4_at_GALNTL1_5end | |||
|id=chr14:69726656..69726686,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.61e-10!25;CL:0000128!8.32e-09!7;CL:0000126!8.32e-09!7;CL:0000127!8.32e-09!7;CL:0002453!8.32e-09!7;CL:0000095!2.97e-08!17;CL:0000123!2.97e-08!17;CL:0000133!2.28e-07!59;CL:0000243!7.62e-07!15;CL:0000125!7.62e-07!15;CL:0000030!7.62e-07!15;CL:0000339!7.62e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000128;7.76e-14;7!CL:0000126;7.76e-14;7!CL:0000127;7.76e-14;7!CL:0002605;1.67e-12;3!CL:0002319;4.64e-08;25!CL:0000095;7.86e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,4.74e-14,7;CL:0000126,4.74e-14,7;CL:0000127,4.74e-14,7;CL:0002453,4.74e-14,7;CL:0002605,1.34e-12,3;CL:0002319,3.82e-08,25;CL:0000095,6.40e-07,17;CL:0000123,6.40e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.18e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@GALNTL1 | |||
}} |
Revision as of 05:19, 11 September 2013
Short description: | p4@GALNTL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GALNTL1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000337827, NM_001168368, NM_020692_5end |
EntrezGene: | GALNTL1 |
HGNC: | 23233 |
UniProt: | Q8N428Q68VJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 4.74e-14 | 7 |
macroglial cell | 4.74e-14 | 7 |
astrocyte | 4.74e-14 | 7 |
oligodendrocyte precursor cell | 4.74e-14 | 7 |
astrocyte of the cerebral cortex | 1.34e-12 | 3 |
neural cell | 3.82e-08 | 25 |
neuron associated cell | 6.40e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.40e-07 | 17 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.