FFCP PHASE1:Hg19::chr17:7255566..7255590,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=147040|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21302|TSSclassifier=W|UniProt=Q693B1|association_with_transcript=358bp_to_ENST00000333751,NM_001002914,uc002gge.3_5end|coexpression_cluster_id=C3674|description=CAGE_peak_2_at_KCTD11_5end|id=chr17:7255566..7255590,+|ontology_enrichment_celltype=CL:0002076!1.41e-10!43;CL:0002368!9.70e-09!13;CL:0000055!9.29e-07!180|ontology_enrichment_celltype_v019=CL:0002368;8.84e-12;13!CL:0002076;3.35e-08;42!CL:0002202;6.34e-08;9!CL:0002632;6.34e-08;9!CL:0002159;1.96e-07;14|ontology_enrichment_celltype_v019_2=CL:0002368,1.10e-11,13;CL:0002076,7.68e-11,42;CL:0002202,7.65e-08,9;CL:0002632,7.65e-08,9;CL:0002159,1.49e-07,14|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002100!3.87e-09!216;UBERON:0003102!2.68e-08!95;UBERON:0000915!6.36e-08!52;UBERON:0000475!7.04e-08!365;UBERON:0003104!8.68e-08!238;UBERON:0009142!8.68e-08!238;UBERON:0001004!1.17e-07!72;UBERON:0007196!5.15e-07!14;UBERON:0001558!5.15e-07!14;UBERON:0004119!8.26e-07!169;UBERON:0000925!8.26e-07!169;UBERON:0006595!8.26e-07!169|ontology_enrichment_uberon_v019=UBERON:0007196;1.61e-09;15!UBERON:0001558;1.61e-09;15!UBERON:0000486;6.37e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.24e-11,99;UBERON:0007196,2.09e-09,15;UBERON:0001558,2.09e-09,15;UBERON:0000915,1.59e-08,52;UBERON:0009569,3.96e-08,112;UBERON:0001004,6.31e-08,74;UBERON:0002097,7.76e-08,41;UBERON:0002199,2.20e-07,46;UBERON:0002416,2.20e-07,46;UBERON:0002100,2.52e-07,199|phase1_expression=3.81524596468169,2.5692062866918,1.83240725324762,4.00293193412522,2.23480547213644,1.74467704820074,0,1.89515962028049,0.783556884599516,3.68600904752263,9.07141518364156,0.218441372130172,1.05506791291381,0.37129905888014,0.662794751455832,0.672325146451775,0,0.730310090387373,0,0.123121058076788,0.408001382488506,0.626909442956176,0,0,0.376627918784408,0.382067028739756,0.164201178899891,0.0787107813136792,0.786728553697808,0.383829398097213,0.619264493264304,10.1136334692682,10.5422071572388,10.7228662948368,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0.581592955118259,0.377875943688809,1.4555043671269,0.697287110717054,0,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0.564727018627814,1.09162460023138,0.224723484445085,0.918251677112708,0,1.27867425159808,0,0.199463657621632,0.852449501065388,0,0,0.622822248995575,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0.632924774881769,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0.403213486449465,0.267440195783507,0.144824403882799,0,0,3.32442660793179,1.80719576192283,3.00802746381534,1.30361867064741,1.5905718941022,0.973269740605272,0.189069634328136,0.665188192387692,0.351339142772504,0.982343066232845,4.37154345951051,2.96627554227544,0.324547393654683,1.0447784237956,0.26591592103773,0,0,0,0,0.860234595106124,0,0,0.838998872419812,0,0.208994966536811,0,0,0,0.805658634218294,0.760272105718513,0.24406205754817,0,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,0,0,12.6467275121335,4.96971951695318,0.886413581652058,3.44263870114369,2.86836620748814,0.709336764396714,2.80338800071154,8.5399196583764,8.14002909776628,1.24484414159907,0.269421344139376,0.490385709340376,0.454072282934794,0,0.468642863667593,0.624320153660641,1.1409436430889,0.896692083310806,0.23486899728753,0.161872944368132,0.140450806702248,0.408308342509787,0,0.413303124703062,2.37600571456411,2.96720315134268,0,5.03032699271367,0,0,0.554128230968366,0.877955241761676,0.919463387397059,2.10333282469236,0.226864366320042,2.51145489964407,2.98980344345994,3.81477422087211,1.80054657650641,2.67936576019941,5.41045134095821,2.41951913231067,3.20675031258406,4.67697624773753,3.5340728394176,4.87864462804187,1.2931684545505,1.42003837006646,1.10827308050404,1.69560592310488,5.41130388857231,7.36414525595254,6.59650569394709,0.609868530647977,0,0,0,0,0,1.56449532329816,2.57296375277154,0,2.3218396401599,2.88751792667834,0.828147600278907,1.34867752062481,0.964044119533928,1.7647035637183,1.52515610864684,0.949082476444386,1.07865046528132,0.98110732562673,0.769494313892781,0,0,1.2347220339942,1.47008711385542,0,0,0,0,0.122988438543114,1.02940686179115,12.6212828219919,3.37205259772859,5.5290934826397,2.03694579348765,0,0,1.44331342025273,0.115930404975077,1.76113041353732,0,0,0.190254152234598,1.58040879591855,4.29243081047436,0,0,0.148631162288728,2.81201501960331,11.4227847175224,5.10390350072591,6.00042102109084,5.81267877027924,8.43441894163465,0,0,0.829312462163088,0.288239906833923,1.76739406796932,0.063497894292169,0,0,3.4214489204541,0,0,0,0.224262168690721,0.87192013766656,0.0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=147040 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21302 | |||
|TSSclassifier=W | |||
|UniProt=Q693B1 | |||
|association_with_transcript=358bp_to_ENST00000333751,NM_001002914,uc002gge.3_5end | |||
|coexpression_cluster_id=C3674 | |||
|description=CAGE_peak_2_at_KCTD11_5end | |||
|id=chr17:7255566..7255590,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.41e-10!43;CL:0002368!9.70e-09!13;CL:0000055!9.29e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002368;8.84e-12;13!CL:0002076;3.35e-08;42!CL:0002202;6.34e-08;9!CL:0002632;6.34e-08;9!CL:0002159;1.96e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.10e-11,13;CL:0002076,7.68e-11,42;CL:0002202,7.65e-08,9;CL:0002632,7.65e-08,9;CL:0002159,1.49e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!3.87e-09!216;UBERON:0003102!2.68e-08!95;UBERON:0000915!6.36e-08!52;UBERON:0000475!7.04e-08!365;UBERON:0003104!8.68e-08!238;UBERON:0009142!8.68e-08!238;UBERON:0001004!1.17e-07!72;UBERON:0007196!5.15e-07!14;UBERON:0001558!5.15e-07!14;UBERON:0004119!8.26e-07!169;UBERON:0000925!8.26e-07!169;UBERON:0006595!8.26e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0007196;1.61e-09;15!UBERON:0001558;1.61e-09;15!UBERON:0000486;6.37e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,5.24e-11,99;UBERON:0007196,2.09e-09,15;UBERON:0001558,2.09e-09,15;UBERON:0000915,1.59e-08,52;UBERON:0009569,3.96e-08,112;UBERON:0001004,6.31e-08,74;UBERON:0002097,7.76e-08,41;UBERON:0002199,2.20e-07,46;UBERON:0002416,2.20e-07,46;UBERON:0002100,2.52e-07,199 | |||
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| |||
|short_description=p2@KCTD11 | |||
}} |
Revision as of 15:31, 11 September 2013
Short description: | p2@KCTD11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_KCTD11_5end |
Coexpression cluster: | C3674_Small_Urothelial_Prostate_Esophageal_Alveolar_chorionic_Mammary |
Association with transcript: | 358bp_to_ENST00000333751, NM_001002914, uc002gge.3_5end |
EntrezGene: | KCTD11 |
HGNC: | 21302 |
UniProt: | Q693B1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.10e-11 | 13 |
endo-epithelial cell | 7.68e-11 | 42 |
epithelial cell of tracheobronchial tree | 7.65e-08 | 9 |
epithelial cell of lower respiratory tract | 7.65e-08 | 9 |
general ecto-epithelial cell | 1.49e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
surface structure | 5.24e-11 | 99 |
tracheobronchial tree | 2.09e-09 | 15 |
lower respiratory tract | 2.09e-09 | 15 |
thoracic segment of trunk | 1.59e-08 | 52 |
subdivision of trunk | 3.96e-08 | 112 |
respiratory system | 6.31e-08 | 74 |
skin of body | 7.76e-08 | 41 |
integument | 2.20e-07 | 46 |
integumental system | 2.20e-07 | 46 |
trunk | 2.52e-07 | 199 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.