FFCP PHASE1:Hg19::chr17:74864215..74864221,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=146664|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24140|TSSclassifier=S|UniProt=|association_with_transcript=-316bp_to_ENST00000374998_5end|coexpression_cluster_id=C472|description=CAGE_peak_9_at_MGAT5B_5end|id=chr17:74864215..74864221,+|ontology_enrichment_celltype=CL:0000167!2.29e-08!1;CL:0000164!2.29e-08!1;CL:0000502!2.29e-08!1;CL:0000172!2.29e-08!1;CL:0000173!2.29e-08!1;CL:0002351!2.29e-08!1|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;8.28e-08;82|ontology_enrichment_disease=DOID:4430!2.29e-08!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001869!1.63e-83!32;UBERON:0001893!1.54e-78!34;UBERON:0002791!6.82e-73!33;UBERON:0002020!1.03e-70!34;UBERON:0003528!1.03e-70!34;UBERON:0002619!8.88e-68!22;UBERON:0002780!7.47e-65!41;UBERON:0001890!7.47e-65!41;UBERON:0006240!7.47e-65!41;UBERON:0001950!9.81e-65!20;UBERON:0003080!2.92e-63!42;UBERON:0000956!1.22e-59!25;UBERON:0000203!1.22e-59!25;UBERON:0001049!9.51e-51!57;UBERON:0005068!9.51e-51!57;UBERON:0006241!9.51e-51!57;UBERON:0007135!9.51e-51!57;UBERON:0000955!1.76e-49!69;UBERON:0006238!1.76e-49!69;UBERON:0002616!6.24e-49!59;UBERON:0001017!3.80e-45!82;UBERON:0005743!6.58e-43!86;UBERON:0003056!9.26e-43!61;UBERON:0000073!1.52e-38!94;UBERON:0001016!1.52e-38!94;UBERON:0003075!5.28e-36!86;UBERON:0007284!5.28e-36!86;UBERON:0007023!8.47e-35!115;UBERON:0002346!3.01e-34!90;UBERON:0001871!2.39e-32!7;UBERON:0000200!1.40e-29!6;UBERON:0000033!6.41e-29!123;UBERON:0002420!1.14e-28!9;UBERON:0007245!1.14e-28!9;UBERON:0010009!1.14e-28!9;UBERON:0010011!1.14e-28!9;UBERON:0000454!1.14e-28!9;UBERON:0000153!2.11e-27!129;UBERON:0007811!2.11e-27!129;UBERON:0000349!5.63e-24!5;UBERON:0002771!7.18e-22!3;UBERON:0004121!6.64e-20!169;UBERON:0000924!2.35e-19!173;UBERON:0006601!2.35e-19!173;UBERON:0000369!5.00e-17!4;UBERON:0002435!5.00e-17!4;UBERON:0000204!5.00e-17!4;UBERON:0010082!5.00e-17!4;UBERON:0009663!1.22e-16!7;UBERON:0001876!4.45e-16!2;UBERON:0001873!1.45e-15!2;UBERON:0010122!1.45e-15!2;UBERON:0001872!1.57e-13!5;UBERON:0002021!2.31e-13!5;UBERON:0002308!5.49e-13!9;UBERON:0000125!5.49e-13!9;UBERON:0000025!2.37e-12!194;UBERON:0005383!1.11e-10!3;UBERON:0005382!1.11e-10!3;UBERON:0000064!1.71e-10!219;UBERON:0004111!3.54e-09!241;UBERON:0002022!6.50e-09!1;UBERON:0002902!9.46e-09!1;UBERON:0009899!9.46e-09!1;UBERON:0001882!1.10e-08!1;UBERON:0005403!1.10e-08!1;UBERON:0002581!1.27e-08!1;UBERON:0007190!1.59e-08!1;UBERON:0003112!2.84e-08!1;UBERON:0000032!2.84e-08!1;UBERON:0005253!2.84e-08!1;UBERON:0003128!2.84e-08!1;UBERON:0002241!2.84e-08!1;UBERON:0001703!2.84e-08!1;UBERON:0004761!2.84e-08!1;UBERON:0009617!2.84e-08!1;UBERON:0000477!4.87e-08!286;UBERON:0000483!3.74e-07!309;UBERON:0000119!4.81e-07!312;UBERON:0000475!5.72e-07!365|ontology_enrichment_uberon_v019=UBERON:0002022;1.81e-40;1!UBERON:0001950;1.08e-30;20!UBERON:0002619;4.22e-28;22!UBERON:0000956;5.82e-25;25!UBERON:0000203;5.82e-25;25!UBERON:0001871;1.21e-23;6!UBERON:0001876;3.11e-21;2!UBERON:0003528;3.95e-18;34!UBERON:0002020;3.95e-18;34!UBERON:0001893;1.72e-17;34!UBERON:0002791;3.16e-17;32!UBERON:0001869;3.16e-17;32!UBERON:0001870;1.71e-14;3!UBERON:0000955;2.59e-11;68!UBERON:0002780;4.87e-11;41!UBERON:0001890;4.87e-11;41!UBERON:0001017;2.39e-09;75!UBERON:0000349;2.53e-09;5!UBERON:0000073;2.40e-08;53!UBERON:0002616;2.40e-08;53|ontology_enrichment_uberon_v019_2=UBERON:0002022,1.48e-40,1;UBERON:0001950,1.22e-30,20;UBERON:0002619,4.68e-28,22;UBERON:0000956,6.39e-25,25;UBERON:0000203,6.39e-25,25;UBERON:0001871,1.28e-23,6;UBERON:0001876,3.11e-21,2;UBERON:0002791,8.18e-20,32;UBERON:0001869,8.18e-20,32;UBERON:0003528,9.96e-19,34;UBERON:0002020,9.96e-19,34;UBERON:0001893,9.96e-19,34;UBERON:0002780,9.75e-16,41;UBERON:0001890,9.75e-16,41;UBERON:0003080,9.75e-16,41;UBERON:0006240,9.75e-16,41;UBERON:0000955,9.02e-15,68;UBERON:0006238,9.02e-15,68;UBERON:0001870,2.09e-14,3;UBERON:0001017,1.45e-12,81;UBERON:0000073,2.11e-12,53;UBERON:0002616,2.11e-12,53;UBERON:0001049,8.70e-12,56;UBERON:0005068,8.70e-12,56;UBERON:0006241,8.70e-12,56;UBERON:0007135,8.70e-12,56;UBERON:0001016,2.13e-11,89;UBERON:0003056,6.84e-11,61;UBERON:0000349,2.53e-09,5;UBERON:0007023,2.58e-09,114;UBERON:0003075,2.69e-08,82;UBERON:0007284,2.69e-08,82;UBERON:0002346,6.09e-08,86|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=146664 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24140 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-316bp_to_ENST00000374998_5end | |||
|coexpression_cluster_id=C472 | |||
|description=CAGE_peak_9_at_MGAT5B_5end | |||
|id=chr17:74864215..74864221,+ | |||
|ontology_enrichment_celltype=CL:0000167!2.29e-08!1;CL:0000164!2.29e-08!1;CL:0000502!2.29e-08!1;CL:0000172!2.29e-08!1;CL:0000173!2.29e-08!1;CL:0002351!2.29e-08!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.28e-08;82 | |||
|ontology_enrichment_disease=DOID:4430!2.29e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!1.63e-83!32;UBERON:0001893!1.54e-78!34;UBERON:0002791!6.82e-73!33;UBERON:0002020!1.03e-70!34;UBERON:0003528!1.03e-70!34;UBERON:0002619!8.88e-68!22;UBERON:0002780!7.47e-65!41;UBERON:0001890!7.47e-65!41;UBERON:0006240!7.47e-65!41;UBERON:0001950!9.81e-65!20;UBERON:0003080!2.92e-63!42;UBERON:0000956!1.22e-59!25;UBERON:0000203!1.22e-59!25;UBERON:0001049!9.51e-51!57;UBERON:0005068!9.51e-51!57;UBERON:0006241!9.51e-51!57;UBERON:0007135!9.51e-51!57;UBERON:0000955!1.76e-49!69;UBERON:0006238!1.76e-49!69;UBERON:0002616!6.24e-49!59;UBERON:0001017!3.80e-45!82;UBERON:0005743!6.58e-43!86;UBERON:0003056!9.26e-43!61;UBERON:0000073!1.52e-38!94;UBERON:0001016!1.52e-38!94;UBERON:0003075!5.28e-36!86;UBERON:0007284!5.28e-36!86;UBERON:0007023!8.47e-35!115;UBERON:0002346!3.01e-34!90;UBERON:0001871!2.39e-32!7;UBERON:0000200!1.40e-29!6;UBERON:0000033!6.41e-29!123;UBERON:0002420!1.14e-28!9;UBERON:0007245!1.14e-28!9;UBERON:0010009!1.14e-28!9;UBERON:0010011!1.14e-28!9;UBERON:0000454!1.14e-28!9;UBERON:0000153!2.11e-27!129;UBERON:0007811!2.11e-27!129;UBERON:0000349!5.63e-24!5;UBERON:0002771!7.18e-22!3;UBERON:0004121!6.64e-20!169;UBERON:0000924!2.35e-19!173;UBERON:0006601!2.35e-19!173;UBERON:0000369!5.00e-17!4;UBERON:0002435!5.00e-17!4;UBERON:0000204!5.00e-17!4;UBERON:0010082!5.00e-17!4;UBERON:0009663!1.22e-16!7;UBERON:0001876!4.45e-16!2;UBERON:0001873!1.45e-15!2;UBERON:0010122!1.45e-15!2;UBERON:0001872!1.57e-13!5;UBERON:0002021!2.31e-13!5;UBERON:0002308!5.49e-13!9;UBERON:0000125!5.49e-13!9;UBERON:0000025!2.37e-12!194;UBERON:0005383!1.11e-10!3;UBERON:0005382!1.11e-10!3;UBERON:0000064!1.71e-10!219;UBERON:0004111!3.54e-09!241;UBERON:0002022!6.50e-09!1;UBERON:0002902!9.46e-09!1;UBERON:0009899!9.46e-09!1;UBERON:0001882!1.10e-08!1;UBERON:0005403!1.10e-08!1;UBERON:0002581!1.27e-08!1;UBERON:0007190!1.59e-08!1;UBERON:0003112!2.84e-08!1;UBERON:0000032!2.84e-08!1;UBERON:0005253!2.84e-08!1;UBERON:0003128!2.84e-08!1;UBERON:0002241!2.84e-08!1;UBERON:0001703!2.84e-08!1;UBERON:0004761!2.84e-08!1;UBERON:0009617!2.84e-08!1;UBERON:0000477!4.87e-08!286;UBERON:0000483!3.74e-07!309;UBERON:0000119!4.81e-07!312;UBERON:0000475!5.72e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002022;1.81e-40;1!UBERON:0001950;1.08e-30;20!UBERON:0002619;4.22e-28;22!UBERON:0000956;5.82e-25;25!UBERON:0000203;5.82e-25;25!UBERON:0001871;1.21e-23;6!UBERON:0001876;3.11e-21;2!UBERON:0003528;3.95e-18;34!UBERON:0002020;3.95e-18;34!UBERON:0001893;1.72e-17;34!UBERON:0002791;3.16e-17;32!UBERON:0001869;3.16e-17;32!UBERON:0001870;1.71e-14;3!UBERON:0000955;2.59e-11;68!UBERON:0002780;4.87e-11;41!UBERON:0001890;4.87e-11;41!UBERON:0001017;2.39e-09;75!UBERON:0000349;2.53e-09;5!UBERON:0000073;2.40e-08;53!UBERON:0002616;2.40e-08;53 | |||
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|short_description=p9@MGAT5B | |||
}} |
Revision as of 15:52, 11 September 2013
Short description: | p9@MGAT5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_MGAT5B_5end |
Coexpression cluster: | C472_amygdala_medial_hippocampus_insula_frontal_temporal_paracentral |
Association with transcript: | -316bp_to_ENST00000374998_5end |
EntrezGene: | MGAT5B |
HGNC: | 24140 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insula | 1.48e-40 | 1 |
neocortex | 1.22e-30 | 20 |
regional part of cerebral cortex | 4.68e-28 | 22 |
cerebral cortex | 6.39e-25 | 25 |
pallium | 6.39e-25 | 25 |
temporal lobe | 1.28e-23 | 6 |
amygdala | 3.11e-21 | 2 |
regional part of telencephalon | 8.18e-20 | 32 |
cerebral hemisphere | 8.18e-20 | 32 |
brain grey matter | 9.96e-19 | 34 |
gray matter | 9.96e-19 | 34 |
telencephalon | 9.96e-19 | 34 |
regional part of forebrain | 9.75e-16 | 41 |
forebrain | 9.75e-16 | 41 |
anterior neural tube | 9.75e-16 | 41 |
future forebrain | 9.75e-16 | 41 |
brain | 9.02e-15 | 68 |
future brain | 9.02e-15 | 68 |
frontal cortex | 2.09e-14 | 3 |
central nervous system | 1.45e-12 | 81 |
regional part of nervous system | 2.11e-12 | 53 |
regional part of brain | 2.11e-12 | 53 |
neural tube | 8.70e-12 | 56 |
neural rod | 8.70e-12 | 56 |
future spinal cord | 8.70e-12 | 56 |
neural keel | 8.70e-12 | 56 |
nervous system | 2.13e-11 | 89 |
pre-chordal neural plate | 6.84e-11 | 61 |
limbic system | 2.53e-09 | 5 |
adult organism | 2.58e-09 | 114 |
neural plate | 2.69e-08 | 82 |
presumptive neural plate | 2.69e-08 | 82 |
neurectoderm | 6.09e-08 | 86 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.