FFCP PHASE1:Hg19::chr18:56247468..56247487,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=115701|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20565|TSSclassifier=S|UniProt=|association_with_transcript=-67bp_to_AK125243_5end|coexpression_cluster_id=C2468|description=CAGE_peak_18_at_ALPK2_5end|id=chr18:56247468..56247487,-|ontology_enrichment_celltype=CL:0000128!2.43e-12!7;CL:0000126!2.43e-12!7;CL:0000127!2.43e-12!7;CL:0002453!2.43e-12!7;CL:0002057!6.74e-11!42;CL:0000860!8.11e-10!45;CL:0000243!3.36e-09!15;CL:0000125!3.36e-09!15;CL:0000030!3.36e-09!15;CL:0000339!3.36e-09!15;CL:0000095!5.62e-08!17;CL:0000123!5.62e-08!17;CL:0002605!4.65e-07!3;CL:0002620!9.76e-07!23|ontology_enrichment_celltype_v019=CL:0002605;1.22e-19;3!CL:0000860;2.46e-15;33!CL:0002057;2.46e-15;33!CL:0000128;1.85e-14;7!CL:0000126;1.85e-14;7!CL:0000127;1.85e-14;7!CL:0000243;1.13e-12;15!CL:0000125;1.13e-12;15!CL:0000453;2.74e-12;5!CL:0000095;2.79e-11;17!CL:0000473;2.91e-09;39!CL:0000234;2.91e-09;39!CL:0000576;1.61e-08;48!CL:0002319;9.08e-08;25!CL:0000990;5.14e-07;8|ontology_enrichment_celltype_v019_2=CL:0002605,1.23e-19,3;CL:0000128,1.92e-14,7;CL:0000126,1.92e-14,7;CL:0000127,1.92e-14,7;CL:0002453,1.92e-14,7;CL:0000243,1.08e-12,15;CL:0000125,1.08e-12,15;CL:0000030,1.08e-12,15;CL:0000339,1.08e-12,15;CL:0000860,1.76e-12,42;CL:0002057,1.76e-12,42;CL:0000453,2.75e-12,5;CL:0000095,2.69e-11,17;CL:0000123,2.69e-11,17;CL:0000473,1.04e-10,48;CL:0000234,1.04e-10,48;CL:0002194,3.15e-08,59;CL:0000576,3.15e-08,59;CL:0000040,3.15e-08,59;CL:0000559,3.15e-08,59;CL:0002009,6.57e-08,61;CL:0002319,8.87e-08,25;CL:0000839,3.40e-07,66;CL:0000557,4.59e-07,67;CL:0000990,5.15e-07,8;CL:0000763,6.91e-07,108;CL:0000049,6.91e-07,108|ontology_enrichment_development_v019=CL:0000339;1.13e-12;15!CL:0002057;3.70e-08;42!UBERON:0000358;1.42e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0.204000691244253,1.25381888591235,4.29353980696585,2.32686522623903,3.51519390865448,0.61130724598361,0.738905305049512,0.472264687882075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6446715520873,1.23882548358041,0.863077176966451,1.5369642391746,0.236482229888585,0.344745680736619,0,0,0.188242339542605,1.36453075028923,0.449446968890169,1.53041946185451,2.88836124368484,0,0.659702600373432,0.797854630486527,0,0.290209238628584,1.70215567407342,0,2.00998932205395,1.0429658368404,0.868755378820466,0,1.47311054395026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0,0.538168907066586,0.85422955527427,0.423863802319124,0,0.206105058476878,0.257640540045629,0.37223371266318,0,0.0974370051611986,0.757301322732344,0.828449087780694,0,1.06502877754984,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,1.24782516918484,0.713715955188647,0.473107245101804,1.17141414992713,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,1.98895302764489,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,20.4668122592186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0.815425236441684,2.40586546518366,2.54995544090804,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0.134366944973453,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.0524545881349981,0,0.537862017998534,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0.226624183040251,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=115701 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-67bp_to_AK125243_5end | |||
|coexpression_cluster_id=C2468 | |||
|description=CAGE_peak_18_at_ALPK2_5end | |||
|id=chr18:56247468..56247487,- | |||
|ontology_enrichment_celltype=CL:0000128!2.43e-12!7;CL:0000126!2.43e-12!7;CL:0000127!2.43e-12!7;CL:0002453!2.43e-12!7;CL:0002057!6.74e-11!42;CL:0000860!8.11e-10!45;CL:0000243!3.36e-09!15;CL:0000125!3.36e-09!15;CL:0000030!3.36e-09!15;CL:0000339!3.36e-09!15;CL:0000095!5.62e-08!17;CL:0000123!5.62e-08!17;CL:0002605!4.65e-07!3;CL:0002620!9.76e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.22e-19;3!CL:0000860;2.46e-15;33!CL:0002057;2.46e-15;33!CL:0000128;1.85e-14;7!CL:0000126;1.85e-14;7!CL:0000127;1.85e-14;7!CL:0000243;1.13e-12;15!CL:0000125;1.13e-12;15!CL:0000453;2.74e-12;5!CL:0000095;2.79e-11;17!CL:0000473;2.91e-09;39!CL:0000234;2.91e-09;39!CL:0000576;1.61e-08;48!CL:0002319;9.08e-08;25!CL:0000990;5.14e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.23e-19,3;CL:0000128,1.92e-14,7;CL:0000126,1.92e-14,7;CL:0000127,1.92e-14,7;CL:0002453,1.92e-14,7;CL:0000243,1.08e-12,15;CL:0000125,1.08e-12,15;CL:0000030,1.08e-12,15;CL:0000339,1.08e-12,15;CL:0000860,1.76e-12,42;CL:0002057,1.76e-12,42;CL:0000453,2.75e-12,5;CL:0000095,2.69e-11,17;CL:0000123,2.69e-11,17;CL:0000473,1.04e-10,48;CL:0000234,1.04e-10,48;CL:0002194,3.15e-08,59;CL:0000576,3.15e-08,59;CL:0000040,3.15e-08,59;CL:0000559,3.15e-08,59;CL:0002009,6.57e-08,61;CL:0002319,8.87e-08,25;CL:0000839,3.40e-07,66;CL:0000557,4.59e-07,67;CL:0000990,5.15e-07,8;CL:0000763,6.91e-07,108;CL:0000049,6.91e-07,108 | |||
|ontology_enrichment_development_v019=CL:0000339;1.13e-12;15!CL:0002057;3.70e-08;42!UBERON:0000358;1.42e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738726348460727,0.204000691244253,1.25381888591235,4.29353980696585,2.32686522623903,3.51519390865448,0.61130724598361,0.738905305049512,0.472264687882075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6446715520873,1.23882548358041,0.863077176966451,1.5369642391746,0.236482229888585,0.344745680736619,0,0,0.188242339542605,1.36453075028923,0.449446968890169,1.53041946185451,2.88836124368484,0,0.659702600373432,0.797854630486527,0,0.290209238628584,1.70215567407342,0,2.00998932205395,1.0429658368404,0.868755378820466,0,1.47311054395026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0.605429710579726,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0,0.538168907066586,0.85422955527427,0.423863802319124,0,0.206105058476878,0.257640540045629,0.37223371266318,0,0.0974370051611986,0.757301322732344,0.828449087780694,0,1.06502877754984,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,1.24782516918484,0.713715955188647,0.473107245101804,1.17141414992713,0,0,0,0,0,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,1.98895302764489,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,20.4668122592186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0.815425236441684,2.40586546518366,2.54995544090804,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0.134366944973453,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,0.0524545881349981,0,0.537862017998534,0,0.714695326373367,0,0,0,0,0,0,0,0.170388021785422,0.226624183040251,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,5.57548137574807,0,0,0.231522474323834,0,0,0,0,0,0,0,1.79369063011563,3.10887307558079,0.607719912354764,0,8.96357420661187,14.0836730732165,8.01470431853637,3.27609848846413,0,0,0,0,0.172214979660816,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15927591218621,1.9110067515482,0,0,0.348724276104376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0.633492505057185,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |||
|short_description=p18@ALPK2 | |||
}} |
Revision as of 17:52, 11 September 2013
Short description: | p18@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_ALPK2_5end |
Coexpression cluster: | C2468_clear_migratory_mesothelioma_Astrocyte_glioblastoma_alveolar_renal |
Association with transcript: | -67bp_to_AK125243_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.23e-19 | 3 |
oligodendrocyte | 1.92e-14 | 7 |
macroglial cell | 1.92e-14 | 7 |
astrocyte | 1.92e-14 | 7 |
oligodendrocyte precursor cell | 1.92e-14 | 7 |
glial cell (sensu Vertebrata) | 1.08e-12 | 15 |
glial cell | 1.08e-12 | 15 |
glioblast | 1.08e-12 | 15 |
glioblast (sensu Vertebrata) | 1.08e-12 | 15 |
classical monocyte | 1.76e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.76e-12 | 42 |
Langerhans cell | 2.75e-12 | 5 |
neuron associated cell | 2.69e-11 | 17 |
neuron associated cell (sensu Vertebrata) | 2.69e-11 | 17 |
defensive cell | 1.04e-10 | 48 |
phagocyte | 1.04e-10 | 48 |
monopoietic cell | 3.15e-08 | 59 |
monocyte | 3.15e-08 | 59 |
monoblast | 3.15e-08 | 59 |
promonocyte | 3.15e-08 | 59 |
macrophage dendritic cell progenitor | 6.57e-08 | 61 |
neural cell | 8.87e-08 | 25 |
myeloid lineage restricted progenitor cell | 3.40e-07 | 66 |
granulocyte monocyte progenitor cell | 4.59e-07 | 67 |
conventional dendritic cell | 5.15e-07 | 8 |
myeloid cell | 6.91e-07 | 108 |
common myeloid progenitor | 6.91e-07 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.