FFCP PHASE1:Hg19::chr1:1950743..1950748,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2563|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4084|TSSclassifier=S|UniProt=A8K496,O14764|association_with_transcript=-19bp_to_NM_000815,uc001aip.2_5end|coexpression_cluster_id=C1255|description=CAGE_peak_3_at_GABRD_5end|id=chr1:1950743..1950748,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006215;2.45e-34;3!UBERON:0006601;2.11e-10;82!UBERON:0010122;5.41e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.88e-52!57;UBERON:0005068!3.88e-52!57;UBERON:0006241!3.88e-52!57;UBERON:0007135!3.88e-52!57;UBERON:0000955!2.24e-47!69;UBERON:0006238!2.24e-47!69;UBERON:0002616!6.83e-47!59;UBERON:0001017!1.62e-46!82;UBERON:0005743!1.77e-46!86;UBERON:0007023!4.27e-42!115;UBERON:0001893!1.74e-41!34;UBERON:0003075!1.82e-41!86;UBERON:0007284!1.82e-41!86;UBERON:0000073!2.99e-41!94;UBERON:0001016!2.99e-41!94;UBERON:0002780!1.73e-40!41;UBERON:0001890!1.73e-40!41;UBERON:0006240!1.73e-40!41;UBERON:0003080!2.15e-39!42;UBERON:0002346!3.15e-39!90;UBERON:0002791!9.74e-39!33;UBERON:0002020!9.91e-38!34;UBERON:0003528!9.91e-38!34;UBERON:0001869!1.04e-36!32;UBERON:0003056!3.94e-30!61;UBERON:0002619!5.08e-30!22;UBERON:0001950!4.26e-29!20;UBERON:0000033!4.46e-28!123;UBERON:0000153!2.35e-26!129;UBERON:0007811!2.35e-26!129;UBERON:0000956!4.12e-26!25;UBERON:0000203!4.12e-26!25;UBERON:0004121!2.84e-20!169;UBERON:0000924!1.37e-19!173;UBERON:0006601!1.37e-19!173;UBERON:0000200!2.73e-14!6;UBERON:0000369!2.82e-14!4;UBERON:0002435!2.82e-14!4;UBERON:0000204!2.82e-14!4;UBERON:0010082!2.82e-14!4;UBERON:0003076!1.99e-13!15;UBERON:0003057!1.99e-13!15;UBERON:0004733!2.28e-13!12;UBERON:0002028!2.28e-13!12;UBERON:0007277!2.28e-13!12;UBERON:0002308!4.17e-13!9;UBERON:0000125!4.17e-13!9;UBERON:0002420!4.75e-13!9;UBERON:0007245!4.75e-13!9;UBERON:0010009!4.75e-13!9;UBERON:0010011!4.75e-13!9;UBERON:0000454!4.75e-13!9;UBERON:0000025!1.71e-12!194;UBERON:0004732!2.96e-12!13;UBERON:0009663!5.27e-12!7;UBERON:0001872!1.38e-11!5;UBERON:0005383!3.86e-11!3;UBERON:0005382!3.86e-11!3;UBERON:0002771!1.06e-10!3;UBERON:0001871!1.89e-10!7;UBERON:0002298!4.52e-10!8;UBERON:0002680!5.91e-10!9;UBERON:0001895!5.91e-10!9;UBERON:0010092!5.91e-10!9;UBERON:0000064!2.79e-09!219;UBERON:0004111!3.41e-09!241;UBERON:0000475!6.26e-08!365;UBERON:0001873!7.44e-08!2;UBERON:0010122!7.44e-08!2;UBERON:0000483!1.13e-07!309;UBERON:0000119!1.64e-07!312;UBERON:0000477!4.12e-07!286;UBERON:0002021!5.33e-07!5|ontology_enrichment_uberon_v019=UBERON:0001893;2.54e-29;34!UBERON:0001869;9.73e-29;32!UBERON:0002791;3.03e-25;32!UBERON:0001950;5.12e-25;20!UBERON:0002619;8.51e-23;22!UBERON:0003528;8.80e-22;34!UBERON:0002020;8.80e-22;34!UBERON:0001017;2.54e-20;75!UBERON:0002680;2.76e-20;9!UBERON:0001895;2.76e-20;9!UBERON:0001872;2.96e-20;5!UBERON:0000956;4.19e-20;25!UBERON:0000203;4.19e-20;25!UBERON:0000955;8.90e-19;68!UBERON:0000073;8.59e-18;53!UBERON:0002616;8.59e-18;53!UBERON:0002037;1.61e-17;6!UBERON:0000200;5.44e-17;6!UBERON:0005383;7.82e-16;3!UBERON:0005382;7.82e-16;3!UBERON:0004733;2.74e-15;12!UBERON:0002028;2.74e-15;12!UBERON:0001016;3.88e-15;83!UBERON:0002780;4.61e-15;41!UBERON:0001890;4.61e-15;41!UBERON:0004732;3.92e-14;13!UBERON:0002902;1.25e-12;1!UBERON:0009899;1.25e-12;1!UBERON:0002581;2.75e-12;1!UBERON:0001874;2.75e-12;1!UBERON:0003112;2.75e-12;1!UBERON:0011158;2.75e-12;1!UBERON:0007190;2.75e-12;1!UBERON:0003128;2.75e-12;1!UBERON:0001703;2.75e-12;1!UBERON:0002241;2.75e-12;1!UBERON:0000369;4.08e-12;4!UBERON:0002435;4.08e-12;4!UBERON:0000204;4.08e-12;4!UBERON:0007023;1.97e-10;114!UBERON:0002021;5.69e-10;5!UBERON:0011216;1.24e-07;132!UBERON:0009663;2.69e-07;7!UBERON:0001871;3.56e-07;6!UBERON:0001873;5.41e-07;2!UBERON:0002771;9.01e-07;2!UBERON:0002360;9.01e-07;2!UBERON:0000094;9.01e-07;2!UBERON:0010743;9.01e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000955,2.26e-38,68;UBERON:0006238,2.26e-38,68;UBERON:0000073,3.17e-38,53;UBERON:0002616,3.17e-38,53;UBERON:0001017,2.54e-36,81;UBERON:0001049,4.04e-36,56;UBERON:0005068,4.04e-36,56;UBERON:0006241,4.04e-36,56;UBERON:0007135,4.04e-36,56;UBERON:0001016,1.42e-32,89;UBERON:0001869,5.79e-32,32;UBERON:0001893,4.53e-30,34;UBERON:0007023,2.93e-29,114;UBERON:0002791,6.44e-26,32;UBERON:0001950,5.52e-25,20;UBERON:0002780,7.37e-25,41;UBERON:0001890,7.37e-25,41;UBERON:0003080,7.37e-25,41;UBERON:0006240,7.37e-25,41;UBERON:0003528,2.22e-24,34;UBERON:0002020,2.22e-24,34;UBERON:0003075,3.10e-24,82;UBERON:0007284,3.10e-24,82;UBERON:0002346,4.92e-23,86;UBERON:0002619,9.11e-23,22;UBERON:0002680,2.16e-20,9;UBERON:0001895,2.16e-20,9;UBERON:0010092,2.16e-20,9;UBERON:0001872,3.62e-20,5;UBERON:0000956,4.45e-20,25;UBERON:0000203,4.45e-20,25;UBERON:0010371,9.24e-19,104;UBERON:0002037,1.21e-17,6;UBERON:0006215,1.21e-17,6;UBERON:0000200,4.37e-17,6;UBERON:0010314,1.02e-16,132;UBERON:0003056,1.95e-16,61;UBERON:0004121,3.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2563 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4084 | |||
|TSSclassifier=S | |||
|UniProt=A8K496,O14764 | |||
|association_with_transcript=-19bp_to_NM_000815,uc001aip.2_5end | |||
|coexpression_cluster_id=C1255 | |||
|description=CAGE_peak_3_at_GABRD_5end | |||
|id=chr1:1950743..1950748,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.45e-34;3!UBERON:0006601;2.11e-10;82!UBERON:0010122;5.41e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@GABRD | |||
}} |
Revision as of 02:31, 12 September 2013
Short description: | p3@GABRD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_GABRD_5end |
Coexpression cluster: | C1255_cerebellum_postcentral_brain_paracentral_frontal_temporal_pons |
Association with transcript: | -19bp_to_NM_000815, uc001aip.2_5end |
EntrezGene: | GABRD |
HGNC: | 4084 |
UniProt: | A8K496O14764 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.