FFCP PHASE1:Hg19::chr1:236687206..236687219,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3964|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6569|TSSclassifier=S|UniProt=|association_with_transcript=33bp_to_ENST00000238181_5end|description=CAGE_peak_3_at_LGALS8_5end|id=chr1:236687206..236687219,+|ontology_enrichment_celltype=CL:0002057!5.11e-12!42;CL:0000860!1.13e-09!45;CL:0000839!6.99e-08!70;CL:0000766!2.11e-07!76|ontology_enrichment_celltype_v019=CL:0000860;4.05e-13;33!CL:0002057;4.05e-13;33!CL:0000473;1.29e-09;39!CL:0000234;1.29e-09;39|ontology_enrichment_celltype_v019_2=CL:0000860,2.31e-13,42;CL:0002057,2.31e-13,42;CL:0000473,1.71e-11,48;CL:0000234,1.71e-11,48;CL:0000839,3.31e-11,66;CL:0000766,1.35e-10,72;CL:0000557,4.60e-09,67;CL:0002031,1.58e-08,120;CL:0000763,6.85e-08,108;CL:0000049,6.85e-08,108;CL:0002194,2.74e-07,59;CL:0000576,2.74e-07,59;CL:0000040,2.74e-07,59;CL:0000559,2.74e-07,59;CL:0002032,3.20e-07,161;CL:0000837,3.20e-07,161;CL:0000738,4.42e-07,136;CL:0002009,8.98e-07,61|ontology_enrichment_development_v019=CL:0002057;4.52e-10;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.54e-07,76|phase1_expression=0.363356758541113,0.428201047781966,1.55049844505568,0,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0,0,0.218441372130172,0,0.74259811776028,0.331397375727916,0.672325146451775,0,2.19093027116212,0.487932798790507,0,0.204000691244253,0,0.286235987131057,0.273748850145768,0.125542639594803,0.687720651731561,0.903106483949403,0.865818594450472,1.18009283054671,2.68680578668049,0.464448369948228,0,0.30120591877825,0,0,0,0.587200878669695,0.553995408531877,3.20871115952227,1.30206522429511,0,0.32389366601898,0.77272670290256,0.872389432677388,3.02300754951048,1.21292030593908,1.62700325833979,1.6446715520873,0.929119112685311,4.31538588483226,5.12321413058201,1.89185783910868,1.37898272294647,2.5819387343353,1.35426486594342,1.31769637679823,0.818718450173537,1.57306439111559,1.53041946185451,0.962787081228281,0.639337125799041,6.26717470354761,5.78444607102732,6.39337125799041,1.16083695451434,1.70215567407342,1.86846674698672,4.01997864410789,6.77927793946262,4.34377689410233,1.21079900526674,1.84138817993782,2.21523671208619,0.633765858935825,1.06302149982522,0.209658645508376,0.786300418025466,1.20141514273205,1.6072558669708,0,0.59675003159727,0.182664153764634,0,0,0,0.853460445133014,0.400395987036012,0,0,0,1.70763890732835,3.52342313622563,1.91136614062614,0,1.12101712596307,0.526768169550154,0.786839080455332,1.96505381374582,1.02800749499755,0.83593247695339,1.62961133316795,0.946895611469467,0,2.00538822393312,1.47302953737419,0.886135578334485,1.08321545506006,1.92136979588513,3.51160238411671,0.986627427622057,1.10540007114339,0.289803085735052,0,0,0,0.906474741580529,0.383220493601921,0.68725489096526,1.01207876807801,0.318565414324097,0.651083453856419,0,0.602300476311091,0.639933055772092,0,0.710331756132051,1.64225599384209,1.61285394579786,0.534880391567015,1.15859523106239,2.43806866313962,0,1.53435074212236,0.361439152384566,0,0,1.5905718941022,0,0.378139268656271,0.443458794925128,0.87834785693126,0.196468613246569,0,0,0.324547393654683,0,0,0,0,0.74291500265913,0.198762407366705,0,0,0.56530794192401,0,0,0,0.775250277507987,0.35576626268671,0.66944122552934,0,0,0.488124115096339,0.367663080345869,0,0.17859945656816,0.22452937262617,0.112611480483322,1.53316637465883,0,0,3.9534125230819,0,0.436094052142534,0.993943903390637,0.633152558322899,3.44263870114369,0.573673241497627,0.709336764396714,0,0,0.49333509683432,2.17847724779836,1.0776853765575,0.490385709340376,0,1.15235184896,0,0.312160076830321,0.570471821544449,0.448346041655403,0.23486899728753,0.323745888736263,0,0.61246251376468,0.122834317311768,1.13658359293342,0,1.23633464639278,0,0,0.168336113954066,0.125118519871964,1.10825646193673,0,0.612975591598039,0.600952235626387,1.24775401476023,0.358779271377724,0.85422955527427,0.423863802319124,0.300091096084402,0.103052529238439,0.257640540045629,0.18611685633159,0.506328996723799,0.194874010322397,0,0.276149695926898,0.646584227275248,0,0.806016785821122,0.508681776931463,0.57978255948989,1.09098448236334,0.573609190778008,0.609868530647977,0.265059536642971,0.348581828608555,1.34759371519982,0.756962552626885,0,0,0.643240938192885,0,0.464367928031979,0.721879481669586,1.18306800039844,1.85443159085912,0.964044119533928,1.65440959098591,1.52515610864684,1.42362371466658,2.29213223872279,0.98110732562673,2.30848294167834,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0.441463099414651,2.45976877086227,3.08822058537346,0.98775256867763,0,0.201057944823262,0.555530670951178,0,0,2.88662684050547,0.231860809950154,1.29149563659404,0.721832238805369,0,0.570762456703795,1.58040879591855,0,0.738651018262192,0.234004265139238,0,0,1.00789276919316,0.992425680696705,0.268675568108545,0,0.766765358330422,2.4633161894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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3964 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6569 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=33bp_to_ENST00000238181_5end | |||
|description=CAGE_peak_3_at_LGALS8_5end | |||
|id=chr1:236687206..236687219,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.11e-12!42;CL:0000860!1.13e-09!45;CL:0000839!6.99e-08!70;CL:0000766!2.11e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.05e-13;33!CL:0002057;4.05e-13;33!CL:0000473;1.29e-09;39!CL:0000234;1.29e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.31e-13,42;CL:0002057,2.31e-13,42;CL:0000473,1.71e-11,48;CL:0000234,1.71e-11,48;CL:0000839,3.31e-11,66;CL:0000766,1.35e-10,72;CL:0000557,4.60e-09,67;CL:0002031,1.58e-08,120;CL:0000763,6.85e-08,108;CL:0000049,6.85e-08,108;CL:0002194,2.74e-07,59;CL:0000576,2.74e-07,59;CL:0000040,2.74e-07,59;CL:0000559,2.74e-07,59;CL:0002032,3.20e-07,161;CL:0000837,3.20e-07,161;CL:0000738,4.42e-07,136;CL:0002009,8.98e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;4.52e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.54e-07,76 | |||
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| |||
|short_description=p3@LGALS8 | |||
}} |
Revision as of 04:25, 12 September 2013
Short description: | p3@LGALS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LGALS8_5end |
Coexpression cluster: | NA |
Association with transcript: | 33bp_to_ENST00000238181_5end |
EntrezGene: | LGALS8 |
HGNC: | 6569 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.31e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.31e-13 | 42 |
defensive cell | 1.71e-11 | 48 |
phagocyte | 1.71e-11 | 48 |
myeloid lineage restricted progenitor cell | 3.31e-11 | 66 |
myeloid leukocyte | 1.35e-10 | 72 |
granulocyte monocyte progenitor cell | 4.60e-09 | 67 |
hematopoietic lineage restricted progenitor cell | 1.58e-08 | 120 |
myeloid cell | 6.85e-08 | 108 |
common myeloid progenitor | 6.85e-08 | 108 |
monopoietic cell | 2.74e-07 | 59 |
monocyte | 2.74e-07 | 59 |
monoblast | 2.74e-07 | 59 |
promonocyte | 2.74e-07 | 59 |
hematopoietic oligopotent progenitor cell | 3.20e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.20e-07 | 161 |
leukocyte | 4.42e-07 | 136 |
macrophage dendritic cell progenitor | 8.98e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.54e-07 | 76 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.