FFCP PHASE1:Hg19::chr1:66820232..66820259,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5142|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8781|TSSclassifier=W|UniProt=|association_with_transcript=162bp_to_uc009was.2_5end|coexpression_cluster_id=C2359|description=CAGE_peak_22_at_PDE4B_5end|id=chr1:66820232..66820259,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;4.31e-14;82!UBERON:0006215;2.01e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.19e-55!57;UBERON:0005068!1.19e-55!57;UBERON:0006241!1.19e-55!57;UBERON:0007135!1.19e-55!57;UBERON:0001017!1.85e-51!82;UBERON:0005743!1.80e-50!86;UBERON:0002616!1.45e-45!59;UBERON:0000955!2.15e-45!69;UBERON:0006238!2.15e-45!69;UBERON:0000073!2.49e-44!94;UBERON:0001016!2.49e-44!94;UBERON:0002780!1.65e-42!41;UBERON:0001890!1.65e-42!41;UBERON:0006240!1.65e-42!41;UBERON:0003080!2.77e-41!42;UBERON:0003075!5.60e-40!86;UBERON:0007284!5.60e-40!86;UBERON:0001893!1.53e-39!34;UBERON:0002020!1.66e-39!34;UBERON:0003528!1.66e-39!34;UBERON:0001869!2.73e-39!32;UBERON:0002791!1.12e-37!33;UBERON:0002346!1.35e-37!90;UBERON:0001950!1.17e-34!20;UBERON:0002619!2.11e-34!22;UBERON:0000956!1.09e-29!25;UBERON:0000203!1.09e-29!25;UBERON:0003056!3.62e-29!61;UBERON:0007023!9.58e-26!115;UBERON:0000033!6.04e-25!123;UBERON:0000153!2.09e-24!129;UBERON:0007811!2.09e-24!129;UBERON:0004121!1.59e-22!169;UBERON:0000924!1.16e-21!173;UBERON:0006601!1.16e-21!173;UBERON:0003076!6.09e-15!15;UBERON:0003057!6.09e-15!15;UBERON:0000025!6.18e-15!194;UBERON:0000200!1.18e-13!6;UBERON:0001871!6.57e-13!7;UBERON:0004111!5.30e-12!241;UBERON:0002021!2.27e-11!5;UBERON:0002420!2.59e-11!9;UBERON:0007245!2.59e-11!9;UBERON:0010009!2.59e-11!9;UBERON:0010011!2.59e-11!9;UBERON:0000454!2.59e-11!9;UBERON:0002308!3.96e-11!9;UBERON:0000125!3.96e-11!9;UBERON:0004733!1.56e-10!12;UBERON:0002028!1.56e-10!12;UBERON:0007277!1.56e-10!12;UBERON:0004732!1.36e-09!13;UBERON:0000477!1.37e-09!286;UBERON:0002298!3.52e-09!8;UBERON:0000483!1.80e-08!309;UBERON:0000119!2.95e-08!312;UBERON:0000475!5.29e-08!365;UBERON:0009663!8.52e-08!7;UBERON:0001872!9.57e-08!5;UBERON:0002771!1.52e-07!3;UBERON:0000349!3.21e-07!5;UBERON:0000988!3.41e-07!3;UBERON:0001896!5.38e-07!3;UBERON:0005290!5.38e-07!3;UBERON:0010096!5.38e-07!3|ontology_enrichment_uberon_v019=UBERON:0001950;6.45e-56;20!UBERON:0002619;8.11e-51;22!UBERON:0001869;9.25e-48;32!UBERON:0001893;7.83e-45;34!UBERON:0000956;1.23e-44;25!UBERON:0000203;1.23e-44;25!UBERON:0002791;1.02e-41;32!UBERON:0003528;1.05e-41;34!UBERON:0002020;1.05e-41;34!UBERON:0000073;1.51e-28;53!UBERON:0002616;1.51e-28;53!UBERON:0002780;5.94e-28;41!UBERON:0001890;5.94e-28;41!UBERON:0000200;3.98e-26;6!UBERON:0001872;2.52e-20;5!UBERON:0001870;3.24e-20;3!UBERON:0000955;4.31e-20;68!UBERON:0001017;1.03e-19;75!UBERON:0001016;8.24e-15;83!UBERON:0002702;4.53e-14;2!UBERON:0004733;7.67e-13;12!UBERON:0002028;7.67e-13;12!UBERON:0002021;6.64e-12;5!UBERON:0004732;7.71e-12;13!UBERON:0002680;2.51e-11;9!UBERON:0001895;2.51e-11;9!UBERON:0002298;8.01e-10;6!UBERON:0000988;3.53e-09;3!UBERON:0001871;1.22e-08;6!UBERON:0007023;1.69e-08;114!UBERON:0002902;7.02e-08;1!UBERON:0009899;7.02e-08;1!UBERON:0002581;1.68e-07;1!UBERON:0001882;1.68e-07;1!UBERON:0002022;1.68e-07;1!UBERON:0007190;1.68e-07;1!UBERON:0005403;1.68e-07;1!UBERON:0000369;4.33e-07;4!UBERON:0002435;4.33e-07;4!UBERON:0000204;4.33e-07;4!UBERON:0002420;8.12e-07;9!UBERON:0007245;8.12e-07;9!UBERON:0010009;8.12e-07;9!UBERON:0010011;8.12e-07;9!UBERON:0000454;8.12e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001950,4.88e-56,20;UBERON:0000073,1.28e-51,53;UBERON:0002616,1.28e-51,53;UBERON:0001869,1.70e-51,32;UBERON:0002619,6.30e-51,22;UBERON:0001049,1.13e-48,56;UBERON:0005068,1.13e-48,56;UBERON:0006241,1.13e-48,56;UBERON:0007135,1.13e-48,56;UBERON:0001893,2.34e-48,34;UBERON:0003528,2.56e-48,34;UBERON:0002020,2.56e-48,34;UBERON:0002791,1.43e-45,32;UBERON:0000956,9.83e-45,25;UBERON:0000203,9.83e-45,25;UBERON:0000955,9.67e-43,68;UBERON:0006238,9.67e-43,68;UBERON:0001017,3.66e-42,81;UBERON:0002780,1.01e-39,41;UBERON:0001890,1.01e-39,41;UBERON:0003080,1.01e-39,41;UBERON:0006240,1.01e-39,41;UBERON:0001016,1.43e-37,89;UBERON:0003075,4.66e-32,82;UBERON:0007284,4.66e-32,82;UBERON:0002346,2.21e-30,86;UBERON:0000200,2.78e-26,6;UBERON:0003056,8.65e-26,61;UBERON:0010371,2.04e-24,104;UBERON:0007023,2.11e-24,114;UBERON:0001872,2.60e-20,5;UBERON:0001870,3.36e-20,3;UBERON:0010314,2.42e-18,132;UBERON:0004121,1.39e-17,171;UBERON:0000924,1.39e-17,171;UBERON:0006601,1.39e-17,171;UBERON:0002702,5.17e-14,2;UBERON:0004733,9.78e-13,12;UBERON:0002028,9.78e-13,12;UBERON:0007277,9.78e-13,12;UBERON:0011216,2.49e-12,223;UBERON:0002021,6.30e-12,5;UBERON:0004732,9.64e-12,13;UBERON:0002680,2.55e-11,9;UBERON:0001895,2.55e-11,9;UBERON:0010092,2.55e-11,9;UBERON:0000025,2.92e-11,192;UBERON:0003076,3.76e-10,15;UBERON:0003057,3.76e-10,15;UBERON:0002298,1.31e-09,6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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5142 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8781 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=162bp_to_uc009was.2_5end | |||
|coexpression_cluster_id=C2359 | |||
|description=CAGE_peak_22_at_PDE4B_5end | |||
|id=chr1:66820232..66820259,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.31e-14;82!UBERON:0006215;2.01e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p22@PDE4B | |||
}} |
Revision as of 06:33, 12 September 2013
Short description: | p22@PDE4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_PDE4B_5end |
Coexpression cluster: | C2359_cord_cerebellum_occipital_frontal_parietal_postcentral_brain |
Association with transcript: | 162bp_to_uc009was.2_5end |
EntrezGene: | PDE4B |
HGNC: | 8781 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.