FFCP PHASE1:Hg19::chr2:157186741..157186759,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4929|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7981|TSSclassifier=S|UniProt=|association_with_transcript=-108bp_to_ENST00000406048_5end|description=CAGE_peak_25_at_NR4A2_5end|id=chr2:157186741..157186759,-|ontology_enrichment_celltype=CL:0002393!7.95e-16!9;CL:0002397!7.95e-16!9;CL:0000738!5.74e-15!140;CL:0002087!2.52e-12!119;CL:0000624!2.58e-12!6;CL:0000037!2.28e-11!172;CL:0000566!2.28e-11!172;CL:0002031!2.44e-10!124;CL:0000988!4.52e-10!182;CL:0002032!5.81e-10!165;CL:0000837!5.81e-10!165;CL:0000791!7.80e-08!18;CL:0000789!7.80e-08!18;CL:0002420!7.80e-08!18;CL:0002419!7.80e-08!18;CL:0000790!7.80e-08!18;CL:0000838!8.78e-08!52;CL:0000542!1.51e-07!53;CL:0000051!1.51e-07!53;CL:0000766!2.04e-07!76;CL:0000842!3.69e-07!3;CL:0000623!3.84e-07!3;CL:0000825!3.84e-07!3;CL:0000898!9.16e-07!3|ontology_enrichment_celltype_v019=CL:0000226;9.08e-32;3!CL:0000842;9.08e-32;3!CL:0000623;4.28e-15;3!CL:0000775;6.10e-15;3!CL:0000791;1.30e-14;18!CL:0000789;1.30e-14;18!CL:0002419;1.30e-14;18!CL:0000094;1.71e-12;8!CL:0002032;1.13e-11;1!CL:0000557;1.13e-11;1!CL:0000542;1.29e-11;53!CL:0000084;1.70e-10;25!CL:0000625;2.94e-09;11!CL:0000081;3.11e-09;11!CL:0000624;5.74e-08;6!CL:0000236;8.69e-08;13|ontology_enrichment_celltype_v019_2=CL:0000226,1.80e-31,3;CL:0000842,1.80e-31,3;CL:0000838,6.88e-19,52;CL:0000542,1.66e-18,53;CL:0000051,1.66e-18,53;CL:0000738,2.34e-17,136;CL:0000037,1.33e-15,168;CL:0000623,4.60e-15,3;CL:0000825,4.60e-15,3;CL:0000775,4.94e-15,3;CL:0000988,1.08e-14,177;CL:0000791,1.28e-14,18;CL:0000789,1.28e-14,18;CL:0002420,1.28e-14,18;CL:0002419,1.28e-14,18;CL:0000790,1.28e-14,18;CL:0002087,2.35e-13,115;CL:0000094,1.55e-12,8;CL:0002032,1.13e-10,161;CL:0000837,1.13e-10,161;CL:0000084,1.68e-10,25;CL:0000827,1.68e-10,25;CL:0000081,2.90e-09,11;CL:0000625,3.15e-09,11;CL:0000624,5.17e-08,6;CL:0000236,2.46e-07,14;CL:0002031,2.51e-07,120;CL:0000134,4.39e-07,354;CL:0002320,6.78e-07,361|ontology_enrichment_development_v019=CL:0000790;1.30e-14;18!UBERON:0005754;2.63e-12;1!UBERON:0003099;1.13e-11;1!UBERON:0003852;1.13e-11;1!CL:0000051;1.29e-11;53!UBERON:0007297;8.93e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000998;2.63e-12;1!UBERON:0006868;2.63e-12;1!UBERON:0005705;1.13e-11;1!UBERON:0008193;1.13e-11;1!UBERON:0010912;1.13e-11;1!UBERON:0002514;1.13e-11;1!UBERON:0003457;1.13e-11;1!UBERON:0008907;1.13e-11;1!UBERON:0008001;1.13e-11;1!UBERON:0007213;1.13e-11;1!UBERON:0009891;1.13e-11;1!UBERON:0007914;1.13e-11;1!UBERON:0007375;1.13e-11;1!UBERON:0003323;1.13e-11;1!UBERON:0010258;1.13e-11;1!UBERON:0005253;1.13e-11;1!UBERON:0007842;1.13e-11;1!UBERON:0002397;1.13e-11;1!UBERON:0003113;1.13e-11;1!UBERON:0003277;1.13e-11;1!UBERON:0001709;1.13e-11;1!UBERON:0002244;1.13e-11;1!UBERON:0005620;1.13e-11;1!UBERON:0010364;1.13e-11;1!UBERON:0004288;1.13e-11;1!UBERON:0000178;8.21e-07;15!UBERON:0000179;8.21e-07;15!UBERON:0000463;8.21e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.63e-12,1;UBERON:0006868,2.63e-12,1;UBERON:0005705,1.63e-11,1;UBERON:0008193,1.63e-11,1;UBERON:0010912,1.63e-11,1;UBERON:0002514,1.63e-11,1;UBERON:0003457,1.63e-11,1;UBERON:0008907,1.63e-11,1;UBERON:0008001,1.63e-11,1;UBERON:0007213,1.63e-11,1;UBERON:0009891,1.63e-11,1;UBERON:0007914,1.63e-11,1;UBERON:0009292,1.63e-11,1;UBERON:0003099,1.63e-11,1;UBERON:0007375,1.63e-11,1;UBERON:0003323,1.63e-11,1;UBERON:0010258,1.63e-11,1;UBERON:0007842,1.63e-11,1;UBERON:0009494,1.63e-11,1;UBERON:0010042,1.63e-11,1;UBERON:0010045,1.63e-11,1;UBERON:0010259,1.63e-11,1;UBERON:0010359,1.63e-11,1;UBERON:0009526,1.63e-11,1;UBERON:0002397,1.63e-11,1;UBERON:0003113,1.63e-11,1;UBERON:0003277,1.63e-11,1;UBERON:0001709,1.63e-11,1;UBERON:0004066,1.63e-11,1;UBERON:0002244,1.63e-11,1;UBERON:0005620,1.63e-11,1;UBERON:0004362,1.63e-11,1;UBERON:0010364,1.63e-11,1;UBERON:0010046,1.63e-11,1;UBERON:0005868,1.63e-11,1;UBERON:0007238,1.63e-11,1;UBERON:0004288,1.63e-11,1;UBERON:0004068,1.63e-11,1;UBERON:0010334,1.63e-11,1;UBERON:0003852,1.63e-11,1;UBERON:0010253,1.63e-11,1;UBERON:0000178,9.36e-07,15;UBERON:0000179,9.36e-07,15;UBERON:0000463,9.36e-07,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0.419317291016752,0.673971786878971,0.150176892841506,0.32145117339416,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,2.27685187643779,1.76171156811282,1.91136614062614,0,0.560508562981536,0.263384084775077,0.786839080455332,3.93010762749165,1.64481199199607,0,0.977766799900771,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0.593146252648242,0.267540828089713,0,0,0.766440987203842,0.34362744548263,0.506039384039006,0,0,0,0,0,0,0,0,1.209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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4929 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7981 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-108bp_to_ENST00000406048_5end | |||
|description=CAGE_peak_25_at_NR4A2_5end | |||
|id=chr2:157186741..157186759,- | |||
|ontology_enrichment_celltype=CL:0002393!7.95e-16!9;CL:0002397!7.95e-16!9;CL:0000738!5.74e-15!140;CL:0002087!2.52e-12!119;CL:0000624!2.58e-12!6;CL:0000037!2.28e-11!172;CL:0000566!2.28e-11!172;CL:0002031!2.44e-10!124;CL:0000988!4.52e-10!182;CL:0002032!5.81e-10!165;CL:0000837!5.81e-10!165;CL:0000791!7.80e-08!18;CL:0000789!7.80e-08!18;CL:0002420!7.80e-08!18;CL:0002419!7.80e-08!18;CL:0000790!7.80e-08!18;CL:0000838!8.78e-08!52;CL:0000542!1.51e-07!53;CL:0000051!1.51e-07!53;CL:0000766!2.04e-07!76;CL:0000842!3.69e-07!3;CL:0000623!3.84e-07!3;CL:0000825!3.84e-07!3;CL:0000898!9.16e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000226;9.08e-32;3!CL:0000842;9.08e-32;3!CL:0000623;4.28e-15;3!CL:0000775;6.10e-15;3!CL:0000791;1.30e-14;18!CL:0000789;1.30e-14;18!CL:0002419;1.30e-14;18!CL:0000094;1.71e-12;8!CL:0002032;1.13e-11;1!CL:0000557;1.13e-11;1!CL:0000542;1.29e-11;53!CL:0000084;1.70e-10;25!CL:0000625;2.94e-09;11!CL:0000081;3.11e-09;11!CL:0000624;5.74e-08;6!CL:0000236;8.69e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000226,1.80e-31,3;CL:0000842,1.80e-31,3;CL:0000838,6.88e-19,52;CL:0000542,1.66e-18,53;CL:0000051,1.66e-18,53;CL:0000738,2.34e-17,136;CL:0000037,1.33e-15,168;CL:0000623,4.60e-15,3;CL:0000825,4.60e-15,3;CL:0000775,4.94e-15,3;CL:0000988,1.08e-14,177;CL:0000791,1.28e-14,18;CL:0000789,1.28e-14,18;CL:0002420,1.28e-14,18;CL:0002419,1.28e-14,18;CL:0000790,1.28e-14,18;CL:0002087,2.35e-13,115;CL:0000094,1.55e-12,8;CL:0002032,1.13e-10,161;CL:0000837,1.13e-10,161;CL:0000084,1.68e-10,25;CL:0000827,1.68e-10,25;CL:0000081,2.90e-09,11;CL:0000625,3.15e-09,11;CL:0000624,5.17e-08,6;CL:0000236,2.46e-07,14;CL:0002031,2.51e-07,120;CL:0000134,4.39e-07,354;CL:0002320,6.78e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;1.30e-14;18!UBERON:0005754;2.63e-12;1!UBERON:0003099;1.13e-11;1!UBERON:0003852;1.13e-11;1!CL:0000051;1.29e-11;53!UBERON:0007297;8.93e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;2.63e-12;1!UBERON:0006868;2.63e-12;1!UBERON:0005705;1.13e-11;1!UBERON:0008193;1.13e-11;1!UBERON:0010912;1.13e-11;1!UBERON:0002514;1.13e-11;1!UBERON:0003457;1.13e-11;1!UBERON:0008907;1.13e-11;1!UBERON:0008001;1.13e-11;1!UBERON:0007213;1.13e-11;1!UBERON:0009891;1.13e-11;1!UBERON:0007914;1.13e-11;1!UBERON:0007375;1.13e-11;1!UBERON:0003323;1.13e-11;1!UBERON:0010258;1.13e-11;1!UBERON:0005253;1.13e-11;1!UBERON:0007842;1.13e-11;1!UBERON:0002397;1.13e-11;1!UBERON:0003113;1.13e-11;1!UBERON:0003277;1.13e-11;1!UBERON:0001709;1.13e-11;1!UBERON:0002244;1.13e-11;1!UBERON:0005620;1.13e-11;1!UBERON:0010364;1.13e-11;1!UBERON:0004288;1.13e-11;1!UBERON:0000178;8.21e-07;15!UBERON:0000179;8.21e-07;15!UBERON:0000463;8.21e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.63e-12,1;UBERON:0006868,2.63e-12,1;UBERON:0005705,1.63e-11,1;UBERON:0008193,1.63e-11,1;UBERON:0010912,1.63e-11,1;UBERON:0002514,1.63e-11,1;UBERON:0003457,1.63e-11,1;UBERON:0008907,1.63e-11,1;UBERON:0008001,1.63e-11,1;UBERON:0007213,1.63e-11,1;UBERON:0009891,1.63e-11,1;UBERON:0007914,1.63e-11,1;UBERON:0009292,1.63e-11,1;UBERON:0003099,1.63e-11,1;UBERON:0007375,1.63e-11,1;UBERON:0003323,1.63e-11,1;UBERON:0010258,1.63e-11,1;UBERON:0007842,1.63e-11,1;UBERON:0009494,1.63e-11,1;UBERON:0010042,1.63e-11,1;UBERON:0010045,1.63e-11,1;UBERON:0010259,1.63e-11,1;UBERON:0010359,1.63e-11,1;UBERON:0009526,1.63e-11,1;UBERON:0002397,1.63e-11,1;UBERON:0003113,1.63e-11,1;UBERON:0003277,1.63e-11,1;UBERON:0001709,1.63e-11,1;UBERON:0004066,1.63e-11,1;UBERON:0002244,1.63e-11,1;UBERON:0005620,1.63e-11,1;UBERON:0004362,1.63e-11,1;UBERON:0010364,1.63e-11,1;UBERON:0010046,1.63e-11,1;UBERON:0005868,1.63e-11,1;UBERON:0007238,1.63e-11,1;UBERON:0004288,1.63e-11,1;UBERON:0004068,1.63e-11,1;UBERON:0010334,1.63e-11,1;UBERON:0003852,1.63e-11,1;UBERON:0010253,1.63e-11,1;UBERON:0000178,9.36e-07,15;UBERON:0000179,9.36e-07,15;UBERON:0000463,9.36e-07,15 | |||
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|short_description=p25@NR4A2 | |||
}} |
Revision as of 14:10, 12 September 2013
Short description: | p25@NR4A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_25_at_NR4A2_5end |
Coexpression cluster: | NA |
Association with transcript: | -108bp_to_ENST00000406048_5end |
EntrezGene: | NR4A2 |
HGNC: | 7981 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
single nucleate cell | 1.80e-31 | 3 |
mononuclear cell | 1.80e-31 | 3 |
lymphoid lineage restricted progenitor cell | 6.88e-19 | 52 |
lymphocyte | 1.66e-18 | 53 |
common lymphoid progenitor | 1.66e-18 | 53 |
leukocyte | 2.34e-17 | 136 |
hematopoietic stem cell | 1.33e-15 | 168 |
natural killer cell | 4.60e-15 | 3 |
pro-NK cell | 4.60e-15 | 3 |
neutrophil | 4.94e-15 | 3 |
hematopoietic cell | 1.08e-14 | 177 |
mature alpha-beta T cell | 1.28e-14 | 18 |
alpha-beta T cell | 1.28e-14 | 18 |
immature T cell | 1.28e-14 | 18 |
mature T cell | 1.28e-14 | 18 |
immature alpha-beta T cell | 1.28e-14 | 18 |
nongranular leukocyte | 2.35e-13 | 115 |
granulocyte | 1.55e-12 | 8 |
hematopoietic oligopotent progenitor cell | 1.13e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-10 | 161 |
T cell | 1.68e-10 | 25 |
pro-T cell | 1.68e-10 | 25 |
blood cell | 2.90e-09 | 11 |
CD8-positive, alpha-beta T cell | 3.15e-09 | 11 |
CD4-positive, alpha-beta T cell | 5.17e-08 | 6 |
B cell | 2.46e-07 | 14 |
hematopoietic lineage restricted progenitor cell | 2.51e-07 | 120 |
mesenchymal cell | 4.39e-07 | 354 |
connective tissue cell | 6.78e-07 | 361 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.