FFCP PHASE1:Mm9::chr10:102491237..102491291,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=216285|HGNC=|MCL_coexpression_id=409|UniProt=Q8C8B0|association_with_transcript=119bp_to_ENSMUST00000040859,NM_172553,uc007gyg.1_5end|description=CAGE_peak_2_at_Alx1_5end|id=chr10:102491237..102491291,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!6.66e-08!14;UBERON:0003918!6.66e-08!14;UBERON:0005095!6.66e-08!14;UBERON:0007687!6.66e-08!14;UBERON:0000970!5.45e-07!9;UBERON:0000019!5.45e-07!9;UBERON:0000047!5.45e-07!9;UBERON:0004088!5.45e-07!9;UBERON:0002104!5.45e-07!9;UBERON:0001456!5.45e-07!9;UBERON:0003072!5.45e-07!9;UBERON:0003071!5.45e-07!9;UBERON:0004128!5.45e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002113,6.36e-13,14;UBERON:0003918,6.36e-13,14;UBERON:0011143,6.36e-13,14;UBERON:0005095,6.36e-13,14;UBERON:0007687,6.36e-13,14;UBERON:0000970,2.37e-09,9;UBERON:0000019,2.37e-09,9;UBERON:0000047,2.37e-09,9;UBERON:0010312,2.37e-09,9;UBERON:0004088,2.37e-09,9;UBERON:0002104,2.37e-09,9;UBERON:0001456,2.37e-09,9;UBERON:0003072,2.37e-09,9;UBERON:0004128,2.37e-09,9;UBERON:0003071,2.37e-09,9;UBERON:0006554,2.49e-09,18;UBERON:0001008,1.13e-08,19;UBERON:0000489,1.48e-07,21;UBERON:0001444,2.46e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,1.67983705950435,0,0,0,0,0,0,0,0.202316460859598,0,0,4.06613438482959,2.66788438833342,0,0,0,0.299600110518405,0,0.207379224616955,0.270011876663381,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0.470354828542819,0,0.247194967734374,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0,6.00852246716866,0.124406970610093,0,0.631325567659422,4.81445638962004,3.67843367093557,3.60124259610698,4.37043971723574,2.99360596265843,2.17793324484245,1.68663104207512,1.55222022443409,0.215567992932842,2.64748512234947,2.63926686245923,2.19195732427575,0.556094498451196,0.348252166522167,0.205782136407943,5.37392520409932,0,0,0,0.828503090142008,0.469052119962192,0.180062061461015,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0.928946687441754,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,7.01771233526402,5.25543158004753,7.88954149711563,6.31319116320474,5.62462212786115,8.55657002661886,14.4811670014549,3.98547399544926,4.23896565171712,3.70191491765402,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70542270593436,0.162964976442026,0.509235257325564,0,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0,0,0,5.36363973007636,2.73307121007647,1.50796378412959,0,0,0,0,0,0,0,0.141940085208269,3.38324646967785,4.39794790254655,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,1.8006109403131,0.388076051348264,1.07168517515796,0.532020700926821,0.535106452806212,1.31639216481697,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.807322133479528,0.542816324353403,0.477489376012546,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.516639293910924,0.844780627453891,0.58678619322877,0,0.104859344425711,0,0.288030006257865,0,0.810900861160657,0.616265742988964,0.389762468933385,0,0.198681354781265,0,0.295379054349154,0.100966449948148,0.228620419965,0,0,0,0,0.680191150845634,1.77588762699252,0,0,0,0,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,3.73634451303036,4.38927360741134,1.53660245178721,0.972426868273176,1.67690530102386,2.20612210140017,1.77797382241292,1.44224540067226,1.60459604795908,1.76888048234658,1.01391719956096,0.754505365544305,1.591905626988,1.02440243847791,1.09127391015665,0.952587382566147,1.27472758539341,1.73618298417335,1.23625770240992,1.76638704161277,1.71434626192708,1.95223386775271,3.09967046931517,0.726732083161643,1.2234219453993,1.94613598150856,1.46342378298218,0.526139422875686,0.950628796921032,1.12228454331548,2.25406534435931,1.37906275325789,1.22769312950907,0.929621047115796,2.12197272079256,2.74791635731741,1.63752125911786,2.36358159453128,2.48674831689496,0.441182838239031,1.15933917810211|short_description=p2@Alx1}} | ||
|EntrezGene=216285 | |||
|HGNC= | |||
|MCL_coexpression_id=409 | |||
|UniProt=Q8C8B0 | |||
|association_with_transcript=119bp_to_ENSMUST00000040859,NM_172553,uc007gyg.1_5end | |||
|description=CAGE_peak_2_at_Alx1_5end | |||
|id=chr10:102491237..102491291,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!6.66e-08!14;UBERON:0003918!6.66e-08!14;UBERON:0005095!6.66e-08!14;UBERON:0007687!6.66e-08!14;UBERON:0000970!5.45e-07!9;UBERON:0000019!5.45e-07!9;UBERON:0000047!5.45e-07!9;UBERON:0004088!5.45e-07!9;UBERON:0002104!5.45e-07!9;UBERON:0001456!5.45e-07!9;UBERON:0003072!5.45e-07!9;UBERON:0003071!5.45e-07!9;UBERON:0004128!5.45e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,6.36e-13,14;UBERON:0003918,6.36e-13,14;UBERON:0011143,6.36e-13,14;UBERON:0005095,6.36e-13,14;UBERON:0007687,6.36e-13,14;UBERON:0000970,2.37e-09,9;UBERON:0000019,2.37e-09,9;UBERON:0000047,2.37e-09,9;UBERON:0010312,2.37e-09,9;UBERON:0004088,2.37e-09,9;UBERON:0002104,2.37e-09,9;UBERON:0001456,2.37e-09,9;UBERON:0003072,2.37e-09,9;UBERON:0004128,2.37e-09,9;UBERON:0003071,2.37e-09,9;UBERON:0006554,2.49e-09,18;UBERON:0001008,1.13e-08,19;UBERON:0000489,1.48e-07,21;UBERON:0001444,2.46e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,1.67983705950435,0,0,0,0,0,0,0,0.202316460859598,0,0,4.06613438482959,2.66788438833342,0,0,0,0.299600110518405,0,0.207379224616955,0.270011876663381,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0.227178579999552,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0.470354828542819,0,0.247194967734374,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0.255715457330331,0,0,6.00852246716866,0.124406970610093,0,0.631325567659422,4.81445638962004,3.67843367093557,3.60124259610698,4.37043971723574,2.99360596265843,2.17793324484245,1.68663104207512,1.55222022443409,0.215567992932842,2.64748512234947,2.63926686245923,2.19195732427575,0.556094498451196,0.348252166522167,0.205782136407943,5.37392520409932,0,0,0,0.828503090142008,0.469052119962192,0.180062061461015,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0.928946687441754,0.257734922644187,0,0,0.190225626112559,0,0,0,0,0,0,0,0,7.01771233526402,5.25543158004753,7.88954149711563,6.31319116320474,5.62462212786115,8.55657002661886,14.4811670014549,3.98547399544926,4.23896565171712,3.70191491765402,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70542270593436,0.162964976442026,0.509235257325564,0,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0,0,0,5.36363973007636,2.73307121007647,1.50796378412959,0,0,0,0,0,0,0,0.141940085208269,3.38324646967785,4.39794790254655,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,1.8006109403131,0.388076051348264,1.07168517515796,0.532020700926821,0.535106452806212,1.31639216481697,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.807322133479528,0.542816324353403,0.477489376012546,0.328281799490123,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0,0,0,0,0,0,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.516639293910924,0.844780627453891,0.58678619322877,0,0.104859344425711,0,0.288030006257865,0,0.810900861160657,0.616265742988964,0.389762468933385,0,0.198681354781265,0,0.295379054349154,0.100966449948148,0.228620419965,0,0,0,0,0.680191150845634,1.77588762699252,0,0,0,0,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,3.73634451303036,4.38927360741134,1.53660245178721,0.972426868273176,1.67690530102386,2.20612210140017,1.77797382241292,1.44224540067226,1.60459604795908,1.76888048234658,1.01391719956096,0.754505365544305,1.591905626988,1.02440243847791,1.09127391015665,0.952587382566147,1.27472758539341,1.73618298417335,1.23625770240992,1.76638704161277,1.71434626192708,1.95223386775271,3.09967046931517,0.726732083161643,1.2234219453993,1.94613598150856,1.46342378298218,0.526139422875686,0.950628796921032,1.12228454331548,2.25406534435931,1.37906275325789,1.22769312950907,0.929621047115796,2.12197272079256,2.74791635731741,1.63752125911786,2.36358159453128,2.48674831689496,0.441182838239031,1.15933917810211 | |||
|short_description=p2@Alx1 | |||
}} |
Revision as of 15:36, 12 September 2013
Short description: | p2@Alx1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Alx1_5end |
Coexpression cluster: | MCL_coexpression_mm9:409 |
Association with transcript: | 119bp_to_ENSMUST00000040859, NM_172553, uc007gyg.1_5end |
EntrezGene: | Alx1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 6.36e-13 | 14 |
kidney mesenchyme | 6.36e-13 | 14 |
upper urinary tract | 6.36e-13 | 14 |
kidney rudiment | 6.36e-13 | 14 |
kidney field | 6.36e-13 | 14 |
eye | 2.37e-09 | 9 |
camera-type eye | 2.37e-09 | 9 |
simple eye | 2.37e-09 | 9 |
immature eye | 2.37e-09 | 9 |
ocular region | 2.37e-09 | 9 |
visual system | 2.37e-09 | 9 |
face | 2.37e-09 | 9 |
optic cup | 2.37e-09 | 9 |
optic vesicle | 2.37e-09 | 9 |
eye primordium | 2.37e-09 | 9 |
urinary system structure | 2.49e-09 | 18 |
renal system | 1.13e-08 | 19 |
cavitated compound organ | 1.48e-07 | 21 |
subdivision of head | 2.46e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.