FFCP PHASE1:Mm9::chr10:126516062..126516080,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=216439|HGNC=|MCL_coexpression_id=13|UniProt=Q3UHD9|association_with_transcript=99bp_to_ENSMUST00000039259,ENSMUST00000105254,NM_001033263,uc007hhx.1,uc007hhy.1_5end|description=CAGE_peak_4_at_Agap2_5end|id=chr10:126516062..126516080,+|ontology_enrichment_celltype=CL:0000117!2.29e-14!23;CL:0000337!2.29e-14!23;CL:0000540!2.08e-09!33;CL:0000047!2.08e-09!33;CL:0000031!2.08e-09!33;CL:0000404!2.08e-09!33;CL:0000393!6.88e-08!39;CL:0000211!6.88e-08!39;CL:0002319!7.78e-08!43;CL:0000221!9.20e-08!44;CL:0000133!9.20e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,7.56e-22,23;CL:0000337,7.56e-22,23;CL:0000540,6.96e-13,33;CL:0000047,6.96e-13,33;CL:0000031,6.96e-13,33;CL:0000404,6.96e-13,33;CL:0000393,8.50e-10,39;CL:0000211,8.50e-10,39;CL:0002319,4.34e-09,43;CL:0000221,1.01e-08,44;CL:0000133,1.01e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.62e-24!52;UBERON:0005068!1.62e-24!52;UBERON:0006241!1.62e-24!52;UBERON:0007135!1.62e-24!52;UBERON:0001017!3.26e-24!73;UBERON:0005743!3.26e-24!73;UBERON:0000033!8.15e-24!63;UBERON:0002346!7.58e-23!71;UBERON:0003075!7.58e-23!71;UBERON:0007284!7.58e-23!71;UBERON:0000955!8.58e-23!50;UBERON:0006238!8.58e-23!50;UBERON:0000073!9.82e-23!75;UBERON:0001016!9.82e-23!75;UBERON:0002616!5.43e-22!49;UBERON:0003056!2.10e-20!49;UBERON:0002020!2.24e-20!34;UBERON:0003080!1.35e-18!40;UBERON:0004121!2.12e-18!102;UBERON:0000924!2.12e-18!102;UBERON:0006601!2.12e-18!102;UBERON:0002780!5.07e-18!39;UBERON:0001890!5.07e-18!39;UBERON:0006240!5.07e-18!39;UBERON:0002791!1.07e-16!29;UBERON:0003528!1.07e-16!29;UBERON:0001893!1.07e-16!29;UBERON:0007811!1.63e-12!86;UBERON:0000956!1.07e-11!21;UBERON:0001869!1.07e-11!21;UBERON:0000203!1.07e-11!21;UBERON:0000153!4.31e-11!94;UBERON:0002619!8.43e-10!17;UBERON:0002021!2.04e-08!10;UBERON:0000411!2.04e-08!10;UBERON:0001950!2.04e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.32e-31,34;UBERON:0000073,1.94e-29,54;UBERON:0001049,1.51e-27,52;UBERON:0005068,1.51e-27,52;UBERON:0006241,1.51e-27,52;UBERON:0007135,1.51e-27,52;UBERON:0001017,4.09e-26,73;UBERON:0003528,3.00e-25,29;UBERON:0002791,3.00e-25,29;UBERON:0001893,3.00e-25,29;UBERON:0001016,5.45e-25,75;UBERON:0002346,3.98e-23,64;UBERON:0003075,3.98e-23,64;UBERON:0007284,3.98e-23,64;UBERON:0000955,1.03e-22,47;UBERON:0006238,1.03e-22,47;UBERON:0003080,1.08e-21,40;UBERON:0002616,1.35e-21,46;UBERON:0002780,7.74e-21,39;UBERON:0001890,7.74e-21,39;UBERON:0006240,7.74e-21,39;UBERON:0003056,4.67e-19,49;UBERON:0004121,5.18e-19,95;UBERON:0000924,5.18e-19,95;UBERON:0006601,5.18e-19,95;UBERON:0010371,1.57e-18,73;UBERON:0000956,2.49e-17,21;UBERON:0001869,2.49e-17,21;UBERON:0000203,2.49e-17,21;UBERON:0002619,2.52e-14,17;UBERON:0002021,2.02e-12,10;UBERON:0000411,2.02e-12,10;UBERON:0001950,2.02e-12,10;UBERON:0010314,6.38e-12,92;UBERON:0002420,4.89e-09,8;UBERON:0007245,4.89e-09,8;UBERON:0010009,4.89e-09,8;UBERON:0010011,4.89e-09,8;UBERON:0000454,4.89e-09,8;UBERON:0002240,2.46e-07,6;UBERON:0005174,2.46e-07,6;UBERON:0001137,2.46e-07,6;UBERON:0000369,2.89e-07,5;UBERON:0002435,2.89e-07,5;UBERON:0000204,2.89e-07,5;UBERON:0010082,2.89e-07,5;UBERON:0001948,5.63e-07,5;UBERON:0002315,5.63e-07,5|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0.782391344348039,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0.515672092277442,11.5320382689971,12.6957835025288,12.0427966666174,0,0,0,0,0,0.898800331555214,1.53687322128622,1.34796496001021,2.02508907497536,1.68259969081106,12.8542942981712,10.3808214247258,2.9397791811589,3.35459148563827,1.83843757322004,1.10115880999389,4.59674417106676,3.68655679814984,14.7712642257817,21.6825715337711,18.2319679694866,1.11673199600552,1.68828783009504,4.43114918552749,15.9099436155781,17.5117167382897,13.2343606535963,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.34255163915718,0,0.445326417194474,0,0,0.461230994512117,0.452167921657868,0,0.125666591329675,0,0.722996784599558,0,0.161766849947409,0,0,0,1.46390398505774,3.35114730901528,0.255457055208591,0,0,0,2.99581278809645,13.2675174817402,13.6963243803022,16.339486098074,11.5071955798649,3.1168206683934,8.4365456795234,0.509196819251581,0,0,0.420883711772948,0.390361328888111,0.459804208866946,0.540186389416048,0.90422890701429,1.02054748726992,1.5373646434182,0.843315521037559,1.29351685369508,0,0,0.703804496655795,0.43839146485515,0,0.696504333044333,0,0.398068533636986,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.233530684734339,0,0.164167464079095,0.648550476366846,0.877199924551994,0.439100230582101,0.402619256281115,22.7113144449257,8.02655976558419,0,0,0,0.928946687441754,0,0.201683524623343,0.667134131534611,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0.407302655690628,0,0.350679099451593,0.569128834118316,0.147610147979602,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| ||
|EntrezGene=216439 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=Q3UHD9 | |||
|association_with_transcript=99bp_to_ENSMUST00000039259,ENSMUST00000105254,NM_001033263,uc007hhx.1,uc007hhy.1_5end | |||
|description=CAGE_peak_4_at_Agap2_5end | |||
|id=chr10:126516062..126516080,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.29e-14!23;CL:0000337!2.29e-14!23;CL:0000540!2.08e-09!33;CL:0000047!2.08e-09!33;CL:0000031!2.08e-09!33;CL:0000404!2.08e-09!33;CL:0000393!6.88e-08!39;CL:0000211!6.88e-08!39;CL:0002319!7.78e-08!43;CL:0000221!9.20e-08!44;CL:0000133!9.20e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.56e-22,23;CL:0000337,7.56e-22,23;CL:0000540,6.96e-13,33;CL:0000047,6.96e-13,33;CL:0000031,6.96e-13,33;CL:0000404,6.96e-13,33;CL:0000393,8.50e-10,39;CL:0000211,8.50e-10,39;CL:0002319,4.34e-09,43;CL:0000221,1.01e-08,44;CL:0000133,1.01e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.62e-24!52;UBERON:0005068!1.62e-24!52;UBERON:0006241!1.62e-24!52;UBERON:0007135!1.62e-24!52;UBERON:0001017!3.26e-24!73;UBERON:0005743!3.26e-24!73;UBERON:0000033!8.15e-24!63;UBERON:0002346!7.58e-23!71;UBERON:0003075!7.58e-23!71;UBERON:0007284!7.58e-23!71;UBERON:0000955!8.58e-23!50;UBERON:0006238!8.58e-23!50;UBERON:0000073!9.82e-23!75;UBERON:0001016!9.82e-23!75;UBERON:0002616!5.43e-22!49;UBERON:0003056!2.10e-20!49;UBERON:0002020!2.24e-20!34;UBERON:0003080!1.35e-18!40;UBERON:0004121!2.12e-18!102;UBERON:0000924!2.12e-18!102;UBERON:0006601!2.12e-18!102;UBERON:0002780!5.07e-18!39;UBERON:0001890!5.07e-18!39;UBERON:0006240!5.07e-18!39;UBERON:0002791!1.07e-16!29;UBERON:0003528!1.07e-16!29;UBERON:0001893!1.07e-16!29;UBERON:0007811!1.63e-12!86;UBERON:0000956!1.07e-11!21;UBERON:0001869!1.07e-11!21;UBERON:0000203!1.07e-11!21;UBERON:0000153!4.31e-11!94;UBERON:0002619!8.43e-10!17;UBERON:0002021!2.04e-08!10;UBERON:0000411!2.04e-08!10;UBERON:0001950!2.04e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.32e-31,34;UBERON:0000073,1.94e-29,54;UBERON:0001049,1.51e-27,52;UBERON:0005068,1.51e-27,52;UBERON:0006241,1.51e-27,52;UBERON:0007135,1.51e-27,52;UBERON:0001017,4.09e-26,73;UBERON:0003528,3.00e-25,29;UBERON:0002791,3.00e-25,29;UBERON:0001893,3.00e-25,29;UBERON:0001016,5.45e-25,75;UBERON:0002346,3.98e-23,64;UBERON:0003075,3.98e-23,64;UBERON:0007284,3.98e-23,64;UBERON:0000955,1.03e-22,47;UBERON:0006238,1.03e-22,47;UBERON:0003080,1.08e-21,40;UBERON:0002616,1.35e-21,46;UBERON:0002780,7.74e-21,39;UBERON:0001890,7.74e-21,39;UBERON:0006240,7.74e-21,39;UBERON:0003056,4.67e-19,49;UBERON:0004121,5.18e-19,95;UBERON:0000924,5.18e-19,95;UBERON:0006601,5.18e-19,95;UBERON:0010371,1.57e-18,73;UBERON:0000956,2.49e-17,21;UBERON:0001869,2.49e-17,21;UBERON:0000203,2.49e-17,21;UBERON:0002619,2.52e-14,17;UBERON:0002021,2.02e-12,10;UBERON:0000411,2.02e-12,10;UBERON:0001950,2.02e-12,10;UBERON:0010314,6.38e-12,92;UBERON:0002420,4.89e-09,8;UBERON:0007245,4.89e-09,8;UBERON:0010009,4.89e-09,8;UBERON:0010011,4.89e-09,8;UBERON:0000454,4.89e-09,8;UBERON:0002240,2.46e-07,6;UBERON:0005174,2.46e-07,6;UBERON:0001137,2.46e-07,6;UBERON:0000369,2.89e-07,5;UBERON:0002435,2.89e-07,5;UBERON:0000204,2.89e-07,5;UBERON:0010082,2.89e-07,5;UBERON:0001948,5.63e-07,5;UBERON:0002315,5.63e-07,5 | |||
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|short_description=p4@Agap2 | |||
}} |
Revision as of 15:58, 12 September 2013
Short description: | p4@Agap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Agap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 99bp_to_ENSMUST00000039259, ENSMUST00000105254, NM_001033263, uc007hhx.1, uc007hhy.1_5end |
EntrezGene: | Agap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.56e-22 | 23 |
neuroblast (sensu Vertebrata) | 7.56e-22 | 23 |
neuron | 6.96e-13 | 33 |
neuronal stem cell | 6.96e-13 | 33 |
neuroblast | 6.96e-13 | 33 |
electrically signaling cell | 6.96e-13 | 33 |
electrically responsive cell | 8.50e-10 | 39 |
electrically active cell | 8.50e-10 | 39 |
neural cell | 4.34e-09 | 43 |
ectodermal cell | 1.01e-08 | 44 |
neurectodermal cell | 1.01e-08 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.