FFCP PHASE1:Hg19::chr2:217528915..217528939,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4182|description=CAGE_peak_at_chr2:217528915..217528939,+|id=chr2:217528915..217528939,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000197;4.90e-21;6!CL:0000098;4.90e-21;6!CL:0002167;4.90e-21;6!CL:0000540;3.32e-12;6!CL:0000404;3.32e-12;6!CL:0002577;1.88e-11;3!CL:0002616;5.74e-09;1!CL:0002594;1.46e-08;4|ontology_enrichment_celltype_v019_2=CL:0000197,3.25e-21,6;CL:0000098,3.25e-21,6;CL:0002167,3.25e-21,6;CL:0000540,3.03e-12,6;CL:0000031,3.03e-12,6;CL:0000404,3.03e-12,6;CL:0002577,1.66e-11,3;CL:0000047,2.61e-09,8;CL:0002616,3.88e-09,1;CL:0002594,1.52e-08,4;CL:0000133,3.99e-07,59|ontology_enrichment_development_v019=CL:0000031;3.32e-12;6!UBERON:0005754;5.74e-09;1!UBERON:0003099;5.74e-09;1!UBERON:0003852;5.74e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3451;3.22e-16;2!DOID:4159;3.22e-16;2!DOID:0060122;3.22e-16;2!DOID:3151;5.74e-09;1!DOID:2513;5.74e-09;1!DOID:3149;5.74e-09;1|ontology_enrichment_disease_v019_2=DOID:3451,1.02e-15,2;DOID:4159,1.02e-15,2;DOID:0060122,1.02e-15,2;DOID:2513,9.17e-09,1;DOID:3151,1.16e-08,1;DOID:3149,1.16e-08,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000014;9.87e-18;4!UBERON:0007029;5.74e-09;1!UBERON:0000998;5.74e-09;1!UBERON:0005705;5.74e-09;1!UBERON:0006868;5.74e-09;1!UBERON:0008193;5.74e-09;1!UBERON:0010912;5.74e-09;1!UBERON:0002514;5.74e-09;1!UBERON:0003457;5.74e-09;1!UBERON:0008907;5.74e-09;1!UBERON:0008001;5.74e-09;1!UBERON:0007213;5.74e-09;1!UBERON:0009891;5.74e-09;1!UBERON:0007914;5.74e-09;1!UBERON:0007375;5.74e-09;1!UBERON:0003323;5.74e-09;1!UBERON:0010258;5.74e-09;1!UBERON:0005253;5.74e-09;1!UBERON:0007842;5.74e-09;1!UBERON:0002397;5.74e-09;1!UBERON:0003113;5.74e-09;1!UBERON:0003277;5.74e-09;1!UBERON:0001709;5.74e-09;1!UBERON:0002244;5.74e-09;1!UBERON:0005620;5.74e-09;1!UBERON:0010364;5.74e-09;1!UBERON:0004288;5.74e-09;1!UBERON:0001987;8.33e-09;4!UBERON:0001310;1.46e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.48e-17,4;UBERON:0007029,6.22e-09,1;UBERON:0005705,6.72e-09,1;UBERON:0008193,6.72e-09,1;UBERON:0010912,6.72e-09,1;UBERON:0002514,6.72e-09,1;UBERON:0003457,6.72e-09,1;UBERON:0008907,6.72e-09,1;UBERON:0008001,6.72e-09,1;UBERON:0007213,6.72e-09,1;UBERON:0009891,6.72e-09,1;UBERON:0007914,6.72e-09,1;UBERON:0009292,6.72e-09,1;UBERON:0003099,6.72e-09,1;UBERON:0007375,6.72e-09,1;UBERON:0003323,6.72e-09,1;UBERON:0010258,6.72e-09,1;UBERON:0007842,6.72e-09,1;UBERON:0009494,6.72e-09,1;UBERON:0010042,6.72e-09,1;UBERON:0010045,6.72e-09,1;UBERON:0010259,6.72e-09,1;UBERON:0010359,6.72e-09,1;UBERON:0009526,6.72e-09,1;UBERON:0002397,6.72e-09,1;UBERON:0003113,6.72e-09,1;UBERON:0003277,6.72e-09,1;UBERON:0001709,6.72e-09,1;UBERON:0004066,6.72e-09,1;UBERON:0002244,6.72e-09,1;UBERON:0005620,6.72e-09,1;UBERON:0004362,6.72e-09,1;UBERON:0010364,6.72e-09,1;UBERON:0010046,6.72e-09,1;UBERON:0005868,6.72e-09,1;UBERON:0007238,6.72e-09,1;UBERON:0004288,6.72e-09,1;UBERON:0004068,6.72e-09,1;UBERON:0010334,6.72e-09,1;UBERON:0003852,6.72e-09,1;UBERON:0010253,6.72e-09,1;UBERON:0001987,7.57e-09,4;UBERON:0004340,7.57e-09,4;UBERON:0000998,7.85e-09,1;UBERON:0006868,7.85e-09,1;UBERON:0001310,1.52e-08,4|phase1_expression=0,0,0.140954404095971,0,0,1.74467704820074,0,1.26343974685366,0.522371256399677,0,0,0.655324116390517,0.263766978228454,0,0.994192127183747,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.410623275218653,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.189069634328136,0,0.087834785693126,0.0654895377488563,0.728590576585084,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0.560677600142307,0,0.49333509683432,0,0,0,0.454072282934794,0,0.234321431833797,0,0.570471821544449,0,0,0,0,0.408308342509787,0.122834317311768,0.413303124703062,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0,0,0,0,1.2931684545505,0,0,0,0.193260853163297,0.818238361772504,0,0.243947412259191,0,0.929551542956147,0.829288440122964,0.252320850875628,0,0,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0,0.185176890317059,0,0,0,0,0.352226082707465,0,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0,0,2.71295439353627,0.871533458600294,0.799783929456456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.913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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4182 | |||
|description=CAGE_peak_at_chr2:217528915..217528939,+ | |||
|id=chr2:217528915..217528939,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000197;4.90e-21;6!CL:0000098;4.90e-21;6!CL:0002167;4.90e-21;6!CL:0000540;3.32e-12;6!CL:0000404;3.32e-12;6!CL:0002577;1.88e-11;3!CL:0002616;5.74e-09;1!CL:0002594;1.46e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,3.25e-21,6;CL:0000098,3.25e-21,6;CL:0002167,3.25e-21,6;CL:0000540,3.03e-12,6;CL:0000031,3.03e-12,6;CL:0000404,3.03e-12,6;CL:0002577,1.66e-11,3;CL:0000047,2.61e-09,8;CL:0002616,3.88e-09,1;CL:0002594,1.52e-08,4;CL:0000133,3.99e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;3.32e-12;6!UBERON:0005754;5.74e-09;1!UBERON:0003099;5.74e-09;1!UBERON:0003852;5.74e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3451;3.22e-16;2!DOID:4159;3.22e-16;2!DOID:0060122;3.22e-16;2!DOID:3151;5.74e-09;1!DOID:2513;5.74e-09;1!DOID:3149;5.74e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3451,1.02e-15,2;DOID:4159,1.02e-15,2;DOID:0060122,1.02e-15,2;DOID:2513,9.17e-09,1;DOID:3151,1.16e-08,1;DOID:3149,1.16e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000014;9.87e-18;4!UBERON:0007029;5.74e-09;1!UBERON:0000998;5.74e-09;1!UBERON:0005705;5.74e-09;1!UBERON:0006868;5.74e-09;1!UBERON:0008193;5.74e-09;1!UBERON:0010912;5.74e-09;1!UBERON:0002514;5.74e-09;1!UBERON:0003457;5.74e-09;1!UBERON:0008907;5.74e-09;1!UBERON:0008001;5.74e-09;1!UBERON:0007213;5.74e-09;1!UBERON:0009891;5.74e-09;1!UBERON:0007914;5.74e-09;1!UBERON:0007375;5.74e-09;1!UBERON:0003323;5.74e-09;1!UBERON:0010258;5.74e-09;1!UBERON:0005253;5.74e-09;1!UBERON:0007842;5.74e-09;1!UBERON:0002397;5.74e-09;1!UBERON:0003113;5.74e-09;1!UBERON:0003277;5.74e-09;1!UBERON:0001709;5.74e-09;1!UBERON:0002244;5.74e-09;1!UBERON:0005620;5.74e-09;1!UBERON:0010364;5.74e-09;1!UBERON:0004288;5.74e-09;1!UBERON:0001987;8.33e-09;4!UBERON:0001310;1.46e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,2.48e-17,4;UBERON:0007029,6.22e-09,1;UBERON:0005705,6.72e-09,1;UBERON:0008193,6.72e-09,1;UBERON:0010912,6.72e-09,1;UBERON:0002514,6.72e-09,1;UBERON:0003457,6.72e-09,1;UBERON:0008907,6.72e-09,1;UBERON:0008001,6.72e-09,1;UBERON:0007213,6.72e-09,1;UBERON:0009891,6.72e-09,1;UBERON:0007914,6.72e-09,1;UBERON:0009292,6.72e-09,1;UBERON:0003099,6.72e-09,1;UBERON:0007375,6.72e-09,1;UBERON:0003323,6.72e-09,1;UBERON:0010258,6.72e-09,1;UBERON:0007842,6.72e-09,1;UBERON:0009494,6.72e-09,1;UBERON:0010042,6.72e-09,1;UBERON:0010045,6.72e-09,1;UBERON:0010259,6.72e-09,1;UBERON:0010359,6.72e-09,1;UBERON:0009526,6.72e-09,1;UBERON:0002397,6.72e-09,1;UBERON:0003113,6.72e-09,1;UBERON:0003277,6.72e-09,1;UBERON:0001709,6.72e-09,1;UBERON:0004066,6.72e-09,1;UBERON:0002244,6.72e-09,1;UBERON:0005620,6.72e-09,1;UBERON:0004362,6.72e-09,1;UBERON:0010364,6.72e-09,1;UBERON:0010046,6.72e-09,1;UBERON:0005868,6.72e-09,1;UBERON:0007238,6.72e-09,1;UBERON:0004288,6.72e-09,1;UBERON:0004068,6.72e-09,1;UBERON:0010334,6.72e-09,1;UBERON:0003852,6.72e-09,1;UBERON:0010253,6.72e-09,1;UBERON:0001987,7.57e-09,4;UBERON:0004340,7.57e-09,4;UBERON:0000998,7.85e-09,1;UBERON:0006868,7.85e-09,1;UBERON:0001310,1.52e-08,4 | |||
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|short_description=p@chr2:217528915..217528939,+ | |||
}} |
Revision as of 16:43, 12 September 2013
Short description: | p@chr2:217528915..217528939, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:217528915..217528939, + |
Coexpression cluster: | C4182_Osteoblast_Mesothelial_mesenchymal_Fibroblast_Hair_normal_iPS |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 3.25e-21 | 6 |
sensory epithelial cell | 3.25e-21 | 6 |
olfactory epithelial cell | 3.25e-21 | 6 |
neuron | 3.03e-12 | 6 |
neuroblast | 3.03e-12 | 6 |
electrically signaling cell | 3.03e-12 | 6 |
placental epithelial cell | 1.66e-11 | 3 |
neuronal stem cell | 2.61e-09 | 8 |
perirenal adipocyte cell | 3.88e-09 | 1 |
smooth muscle cell of the umbilical artery | 1.52e-08 | 4 |
neurectodermal cell | 3.99e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
skin carcinoma | 1.02e-15 | 2 |
skin cancer | 1.02e-15 | 2 |
integumentary system cancer | 1.02e-15 | 2 |
basal cell carcinoma | 9.17e-09 | 1 |
skin squamous cell carcinoma | 1.16e-08 | 1 |
keratoacanthoma | 1.16e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.