FFCP PHASE1:Mm9::chr11:100565531..100565590,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=80861|HGNC=|MCL_coexpression_id=1264|UniProt=Q99J87|association_with_transcript=0bp_to_ENSMUST00000017974,ENSMUST00000126167,ENSMUST00000132930,NM_030150,uc007llx.1,uc007lly.1_5end|description=CAGE_peak_1_at_Dhx58_5end|id=chr11:100565531..100565590,-|ontology_enrichment_celltype=CL:0000219!2.95e-08!54;CL:0002320!5.87e-08!46;CL:0000134!5.87e-08!46;CL:0000063!1.02e-07!66|ontology_enrichment_celltype_v019_2=CL:0000219,5.74e-09,54;CL:0002320,1.70e-08,46;CL:0000134,1.70e-08,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!4.54e-15!70;UBERON:0002193!4.57e-11!48;UBERON:0004119!6.31e-11!130;UBERON:0000925!6.31e-11!130;UBERON:0006595!6.31e-11!130;UBERON:0001007!1.97e-10!128;UBERON:0001555!1.97e-10!128;UBERON:0007026!1.97e-10!128;UBERON:0002390!3.07e-10!45;UBERON:0003061!3.07e-10!45;UBERON:0004921!4.18e-10!126;UBERON:0004185!4.18e-10!126;UBERON:0002384!5.87e-08!46;UBERON:0002371!5.95e-08!16;UBERON:0005057!7.44e-08!51;UBERON:0000490!1.33e-07!66;UBERON:0002204!3.68e-07!32;UBERON:0003929!3.84e-07!55;UBERON:0005911!6.54e-07!69;UBERON:0000926!7.95e-07!193;UBERON:0004120!7.95e-07!193;UBERON:0006603!7.95e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.01e-11,48;UBERON:0002405,2.01e-11,48;UBERON:0004119,2.38e-11,118;UBERON:0000925,2.38e-11,118;UBERON:0006595,2.38e-11,118;UBERON:0001007,7.86e-11,116;UBERON:0001555,7.86e-11,116;UBERON:0007026,7.86e-11,116;UBERON:0002390,1.49e-10,45;UBERON:0003061,1.49e-10,45;UBERON:0004921,1.70e-10,114;UBERON:0002384,1.70e-08,46;UBERON:0002371,2.69e-08,16;UBERON:0000490,8.57e-08,66;UBERON:0002204,1.96e-07,32;UBERON:0005256,3.86e-07,45;UBERON:0003929,4.10e-07,55|phase1_expression=0.320297694209588,10.8182376368202,7.73498706962211,9.67885476181856,8.5152274090879,5.54001597309236,4.67225281191051,13.6870722848071,2.53419699873,0.70219357896598,0.68487187290202,0.558405112967355,18.8320802924326,9.00430144915673,15.9892685671518,17.0079224607454,6.99561878128147,17.9813434254195,19.3331351384092,15.2780274647291,3.74190476664707,11.0212955832983,15.1495877700583,5.91971964335605,4.5881856213434,7.46501553349526,6.03066794622705,7.54149314400612,5.13063232532209,4.28451220591882,3.32595765982957,0,0,0,2.59966457776147,1.82858109894342,1.22501613757421,34.7381253511633,29.6907430919044,45.5465657257204,24.7057224973026,23.9065919735456,30.1016418879315,2.64383317748712,2.73717714292689,0.183546752161682,34.4252191513137,1.09012578190223,4.83309602015838,6.41618666945135,9.79904951377538,0,13.0870432725034,15.9579671242496,8.73843877770406,4.63066984864705,4.87106847895886,8.76642556871652,0,0,0,2.03306719241479,20.4537803105562,38.2457379844595,58.3431153914515,46.8916875864426,15.579205746957,6.53171119046643,0,0,0,0,0.662605622854841,0,0,0,1.10115880999389,0.255374676170375,0.307213066512487,0,0.0914876436024097,0,0.837548997004143,0,0.916789486660861,0,0.569486723196412,0,2.04460721999597,4.91215140694106,23.1891590961342,8.60423876981386,11.5595126730318,7.01614149129162,11.0461990966104,8.96053774194671,6.17955448579708,2.55645483867087,1.29893002301434,0.35333957451034,0,10.2661181931454,2.54805239706646,0,0.865964164044856,0.506719730950197,2.02209778005913,9.59144589640104,41.1711234999003,9.35185476108396,0.173485326766136,1.82679286987285,2.07553947530453,12.8114244469729,8.70156432804216,17.8446559688139,1.97755974187499,8.82056077211461,20.3460426948471,0.970601099684455,3.75430581382669,3.39412677194655,13.0474232852686,0.292780797011547,0,9.70736809792647,5.99075622529601,5.39912457894067,4.82866862877646,0.599162557619291,0.457500602818626,0,0.347648640384553,0,0.62336413367868,0.486723789203273,1.32391173005411,5.349499736234,3.53811861807145,2.10441855886474,0.130120442962704,0.229902104433473,0,0.150704817835715,1.02054748726992,0.384341160854549,0.562210347358373,1.55222022443409,0,0.189106080167819,0.527853372491847,0.219195732427575,0,0.348252166522167,3.08673204611915,0.199034266818493,2.80885274925294,3.3455227924913,5.39910648851626,0,0.469052119962192,0.180062061461015,0.23674473558521,0.393528463494808,0.462801338662135,0,1.07309360559848,0.934122738937356,0.493679549740441,0.656669856316381,1.05389452409612,2.04679982395465,8.12335426576887,2.81833479396781,0.841159794256509,0.617427674275707,12.5559137533843,20.3626936330929,0,0.464473343720877,0.515469845288373,0.80673409849337,1.55664630691409,7.79925067061493,4.2707615539006,6.75265714368445,13.069430857614,15.7175612912509,15.7920910566487,16.178749355776,7.78096979548899,4.97853183135918,0,0.228497025219458,1.1270773567308,0,1.16371492300575,1.19230893813542,0.948548056863859,1.91893192373483,4.08196692387575,2.34454611451421,11.858105083486,1.00107063429656,0.982794975566015,2.24862112384854,1.82574109249653,2.65294875727659,2.03700681425136,8.91858026097513,7.94462611197673,4.11842119782122,7.18841032636773,14.5134969590716,5.61667811606209,7.32478746046624,12.7372163600558,3.37710464954357,10.7156850296631,0.568474235311454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| ||
|EntrezGene=80861 | |||
|HGNC= | |||
|MCL_coexpression_id=1264 | |||
|UniProt=Q99J87 | |||
|association_with_transcript=0bp_to_ENSMUST00000017974,ENSMUST00000126167,ENSMUST00000132930,NM_030150,uc007llx.1,uc007lly.1_5end | |||
|description=CAGE_peak_1_at_Dhx58_5end | |||
|id=chr11:100565531..100565590,- | |||
|ontology_enrichment_celltype=CL:0000219!2.95e-08!54;CL:0002320!5.87e-08!46;CL:0000134!5.87e-08!46;CL:0000063!1.02e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,5.74e-09,54;CL:0002320,1.70e-08,46;CL:0000134,1.70e-08,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.54e-15!70;UBERON:0002193!4.57e-11!48;UBERON:0004119!6.31e-11!130;UBERON:0000925!6.31e-11!130;UBERON:0006595!6.31e-11!130;UBERON:0001007!1.97e-10!128;UBERON:0001555!1.97e-10!128;UBERON:0007026!1.97e-10!128;UBERON:0002390!3.07e-10!45;UBERON:0003061!3.07e-10!45;UBERON:0004921!4.18e-10!126;UBERON:0004185!4.18e-10!126;UBERON:0002384!5.87e-08!46;UBERON:0002371!5.95e-08!16;UBERON:0005057!7.44e-08!51;UBERON:0000490!1.33e-07!66;UBERON:0002204!3.68e-07!32;UBERON:0003929!3.84e-07!55;UBERON:0005911!6.54e-07!69;UBERON:0000926!7.95e-07!193;UBERON:0004120!7.95e-07!193;UBERON:0006603!7.95e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.01e-11,48;UBERON:0002405,2.01e-11,48;UBERON:0004119,2.38e-11,118;UBERON:0000925,2.38e-11,118;UBERON:0006595,2.38e-11,118;UBERON:0001007,7.86e-11,116;UBERON:0001555,7.86e-11,116;UBERON:0007026,7.86e-11,116;UBERON:0002390,1.49e-10,45;UBERON:0003061,1.49e-10,45;UBERON:0004921,1.70e-10,114;UBERON:0002384,1.70e-08,46;UBERON:0002371,2.69e-08,16;UBERON:0000490,8.57e-08,66;UBERON:0002204,1.96e-07,32;UBERON:0005256,3.86e-07,45;UBERON:0003929,4.10e-07,55 | |||
|phase1_expression=0.320297694209588,10.8182376368202,7.73498706962211,9.67885476181856,8.5152274090879,5.54001597309236,4.67225281191051,13.6870722848071,2.53419699873,0.70219357896598,0.68487187290202,0.558405112967355,18.8320802924326,9.00430144915673,15.9892685671518,17.0079224607454,6.99561878128147,17.9813434254195,19.3331351384092,15.2780274647291,3.74190476664707,11.0212955832983,15.1495877700583,5.91971964335605,4.5881856213434,7.46501553349526,6.03066794622705,7.54149314400612,5.13063232532209,4.28451220591882,3.32595765982957,0,0,0,2.59966457776147,1.82858109894342,1.22501613757421,34.7381253511633,29.6907430919044,45.5465657257204,24.7057224973026,23.9065919735456,30.1016418879315,2.64383317748712,2.73717714292689,0.183546752161682,34.4252191513137,1.09012578190223,4.83309602015838,6.41618666945135,9.79904951377538,0,13.0870432725034,15.9579671242496,8.73843877770406,4.63066984864705,4.87106847895886,8.76642556871652,0,0,0,2.03306719241479,20.4537803105562,38.2457379844595,58.3431153914515,46.8916875864426,15.579205746957,6.53171119046643,0,0,0,0,0.662605622854841,0,0,0,1.10115880999389,0.255374676170375,0.307213066512487,0,0.0914876436024097,0,0.837548997004143,0,0.916789486660861,0,0.569486723196412,0,2.04460721999597,4.91215140694106,23.1891590961342,8.60423876981386,11.5595126730318,7.01614149129162,11.0461990966104,8.96053774194671,6.17955448579708,2.55645483867087,1.29893002301434,0.35333957451034,0,10.2661181931454,2.54805239706646,0,0.865964164044856,0.506719730950197,2.02209778005913,9.59144589640104,41.1711234999003,9.35185476108396,0.173485326766136,1.82679286987285,2.07553947530453,12.8114244469729,8.70156432804216,17.8446559688139,1.97755974187499,8.82056077211461,20.3460426948471,0.970601099684455,3.75430581382669,3.39412677194655,13.0474232852686,0.292780797011547,0,9.70736809792647,5.99075622529601,5.39912457894067,4.82866862877646,0.599162557619291,0.457500602818626,0,0.347648640384553,0,0.62336413367868,0.486723789203273,1.32391173005411,5.349499736234,3.53811861807145,2.10441855886474,0.130120442962704,0.229902104433473,0,0.150704817835715,1.02054748726992,0.384341160854549,0.562210347358373,1.55222022443409,0,0.189106080167819,0.527853372491847,0.219195732427575,0,0.348252166522167,3.08673204611915,0.199034266818493,2.80885274925294,3.3455227924913,5.39910648851626,0,0.469052119962192,0.180062061461015,0.23674473558521,0.393528463494808,0.462801338662135,0,1.07309360559848,0.934122738937356,0.493679549740441,0.656669856316381,1.05389452409612,2.04679982395465,8.12335426576887,2.81833479396781,0.841159794256509,0.617427674275707,12.5559137533843,20.3626936330929,0,0.464473343720877,0.515469845288373,0.80673409849337,1.55664630691409,7.79925067061493,4.2707615539006,6.75265714368445,13.069430857614,15.7175612912509,15.7920910566487,16.178749355776,7.78096979548899,4.97853183135918,0,0.228497025219458,1.1270773567308,0,1.16371492300575,1.19230893813542,0.948548056863859,1.91893192373483,4.08196692387575,2.34454611451421,11.858105083486,1.00107063429656,0.982794975566015,2.24862112384854,1.82574109249653,2.65294875727659,2.03700681425136,8.91858026097513,7.94462611197673,4.11842119782122,7.18841032636773,14.5134969590716,5.61667811606209,7.32478746046624,12.7372163600558,3.37710464954357,10.7156850296631,0.568474235311454,0.325929952884052,0.169745085775188,0.704070744865506,1.00503754465089,5.95109102215034,5.07347484430277,2.52216230569906,4.65075848262427,2.55127629851979,5.73521601505083,9.32498902075836,6.94315481191256,72.3798162908507,98.9908344550051,7.86822836830458,9.65778612066564,0.80275294993896,1.05490517932983,0,1.51482556322624,0,0,0,0,0,0,0.809621403349789,0,0.395287777946524,1.92792789853084,4.11626247103979,1.6025904330053,1.30309567482861,8.41347627159931,1.32745138339963,0.971122544619926,0.302323556964751,0.565815239267694,1.47650946440386,5.22639751504677,6.71913562237375,1.09060118843252,2.49548164869305,2.21225730555071,1.05418608574999,1.03135543248187,7.48967132658334,0,0.646793418913773,0.214337035031592,0.709360934569094,0.535106452806212,0.658196082408484,0.913394847343798,12.6722722354404,4.2366414172764,3.30792597082443,2.96795255294664,2.26050197374268,1.44751019827574,0.477489376012546,0.492422699235184,8.74442509889552,0.370850604021019,16.0618627949982,2.47664241555867,13.8895895527284,9.41842285023455,13.6694227721025,21.2763701082066,13.7682528295023,14.4149995893368,13.9581973542468,5.72802370809068,0.316335993581135,0.203319467126849,0.432021363287205,0.627264888043406,3.05707589244649,1.48350781023303,4.1326727862668,6.80565449158477,3.36998930558661,7.45607175704311,0.56369293868419,0,0.496375471371293,0.583353565032143,0.516639293910924,1.01373675294467,1.05621514781179,0,0.419437377702843,0.724752362478018,1.44015003128933,12.324433704499,0,2.15693010046137,5.97635785697857,4.65469408735452,4.56967115996909,7.3319224207181,6.20296014133224,8.4811817956444,6.62999217898499,6.957006774442,10.233077477674,11.0643617886379,10.0514135876149,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| |||
|short_description=p1@Dhx58 | |||
}} | |||
Revision as of 18:11, 12 September 2013
| Short description: | p1@Dhx58 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Dhx58_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1264 |
| Association with transcript: | 0bp_to_ENSMUST00000017974, ENSMUST00000126167, ENSMUST00000132930, NM_030150, uc007llx.1, uc007lly.1_5end |
| EntrezGene: | Dhx58 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| motile cell | 5.74e-09 | 54 |
| connective tissue cell | 1.70e-08 | 46 |
| mesenchymal cell | 1.70e-08 | 46 |
| Ontology term | p-value | n |
|---|---|---|
| hemolymphoid system | 2.01e-11 | 48 |
| immune system | 2.01e-11 | 48 |
| endoderm-derived structure | 2.38e-11 | 118 |
| endoderm | 2.38e-11 | 118 |
| presumptive endoderm | 2.38e-11 | 118 |
| digestive system | 7.86e-11 | 116 |
| digestive tract | 7.86e-11 | 116 |
| primitive gut | 7.86e-11 | 116 |
| hematopoietic system | 1.49e-10 | 45 |
| blood island | 1.49e-10 | 45 |
| subdivision of digestive tract | 1.70e-10 | 114 |
| connective tissue | 1.70e-08 | 46 |
| bone marrow | 2.69e-08 | 16 |
| unilaminar epithelium | 8.57e-08 | 66 |
| musculoskeletal system | 1.96e-07 | 32 |
| trunk mesenchyme | 3.86e-07 | 45 |
| gut epithelium | 4.10e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
