FFCP PHASE1:Mm9::chr11:36491415..36491441,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=23964|HGNC=|MCL_coexpression_id=13|UniProt=|association_with_transcript=-168bp_to_ENSMUST00000149787,uc007ilm.1_5end|description=CAGE_peak_10_at_Odz2_5end|id=chr11:36491415..36491441,-|ontology_enrichment_celltype=CL:0000117!5.32e-21!23;CL:0000337!5.32e-21!23;CL:0000540!2.64e-15!33;CL:0000047!2.64e-15!33;CL:0000031!2.64e-15!33;CL:0000404!2.64e-15!33;CL:0000393!1.67e-11!39;CL:0000211!1.67e-11!39;CL:0002319!1.31e-09!43;CL:0000221!3.41e-09!44;CL:0000133!3.41e-09!44;CL:0000055!4.23e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.39e-28,23;CL:0000337,2.39e-28,23;CL:0000540,3.05e-18,33;CL:0000047,3.05e-18,33;CL:0000031,3.05e-18,33;CL:0000404,3.05e-18,33;CL:0000393,1.11e-14,39;CL:0000211,1.11e-14,39;CL:0002319,7.24e-13,43;CL:0000221,1.82e-12,44;CL:0000133,1.82e-12,44;CL:0000120,5.53e-08,3;CL:0002613,9.58e-08,3;CL:0002612,6.21e-07,3;CL:0002608,7.82e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.58e-28!52;UBERON:0005068!3.58e-28!52;UBERON:0006241!3.58e-28!52;UBERON:0007135!3.58e-28!52;UBERON:0001017!1.22e-27!73;UBERON:0005743!1.22e-27!73;UBERON:0002346!7.52e-27!71;UBERON:0003075!7.52e-27!71;UBERON:0007284!7.52e-27!71;UBERON:0000033!8.37e-27!63;UBERON:0000073!2.23e-26!75;UBERON:0001016!2.23e-26!75;UBERON:0000955!3.90e-26!50;UBERON:0006238!3.90e-26!50;UBERON:0003056!7.72e-26!49;UBERON:0002616!1.11e-25!49;UBERON:0002020!4.84e-25!34;UBERON:0004121!5.42e-23!102;UBERON:0000924!5.42e-23!102;UBERON:0006601!5.42e-23!102;UBERON:0003080!2.29e-22!40;UBERON:0002780!1.65e-21!39;UBERON:0001890!1.65e-21!39;UBERON:0006240!1.65e-21!39;UBERON:0002791!1.37e-20!29;UBERON:0003528!1.37e-20!29;UBERON:0001893!1.37e-20!29;UBERON:0007811!5.46e-15!86;UBERON:0000956!1.21e-13!21;UBERON:0001869!1.21e-13!21;UBERON:0000203!1.21e-13!21;UBERON:0000153!2.46e-12!94;UBERON:0002619!5.84e-11!17;UBERON:0002021!1.64e-08!10;UBERON:0000411!1.64e-08!10;UBERON:0001950!1.64e-08!10;UBERON:0002420!3.02e-08!8;UBERON:0007245!3.02e-08!8;UBERON:0010009!3.02e-08!8;UBERON:0010011!3.02e-08!8;UBERON:0000454!3.02e-08!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.44e-36,34;UBERON:0000073,6.78e-30,54;UBERON:0003528,7.27e-28,29;UBERON:0002791,7.27e-28,29;UBERON:0001893,7.27e-28,29;UBERON:0001049,3.81e-27,52;UBERON:0005068,3.81e-27,52;UBERON:0006241,3.81e-27,52;UBERON:0007135,3.81e-27,52;UBERON:0001017,8.43e-26,73;UBERON:0001016,6.87e-25,75;UBERON:0003080,1.17e-22,40;UBERON:0002346,3.15e-22,64;UBERON:0003075,3.15e-22,64;UBERON:0007284,3.15e-22,64;UBERON:0002780,2.97e-21,39;UBERON:0001890,2.97e-21,39;UBERON:0006240,2.97e-21,39;UBERON:0002616,9.08e-21,46;UBERON:0000955,3.42e-20,47;UBERON:0006238,3.42e-20,47;UBERON:0000956,1.28e-19,21;UBERON:0001869,1.28e-19,21;UBERON:0000203,1.28e-19,21;UBERON:0002619,2.90e-19,17;UBERON:0004121,3.88e-19,95;UBERON:0000924,3.88e-19,95;UBERON:0006601,3.88e-19,95;UBERON:0003056,5.59e-19,49;UBERON:0010371,1.48e-18,73;UBERON:0002021,2.96e-13,10;UBERON:0000411,2.96e-13,10;UBERON:0001950,2.96e-13,10;UBERON:0010314,3.52e-13,92;UBERON:0001948,1.08e-09,5;UBERON:0002315,1.08e-09,5;UBERON:0002420,2.91e-09,8;UBERON:0007245,2.91e-09,8;UBERON:0010009,2.91e-09,8;UBERON:0010011,2.91e-09,8;UBERON:0000454,2.91e-09,8;UBERON:0000025,1.89e-08,114;UBERON:0002240,5.15e-08,6;UBERON:0005174,5.15e-08,6;UBERON:0001137,5.15e-08,6;UBERON:0001954,1.68e-07,7;UBERON:0003022,1.68e-07,7;UBERON:0002421,1.68e-07,7;UBERON:0000349,1.68e-07,7;UBERON:0002600,1.68e-07,7;UBERON:0000369,1.69e-07,5;UBERON:0002435,1.69e-07,5;UBERON:0000204,1.69e-07,5;UBERON:0010082,1.69e-07,5;UBERON:0004111,1.91e-07,122;UBERON:0002257,6.21e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66486090406874,8.46385566835253,6.33831403506179,0,0,0,0,0,0,0,1.03689612308478,0.945041568321835,0.841299845405528,1.14260393761521,1.10434270475807,1.71487118900936,2.77951865952885,1.83843757322004,1.10115880999389,0.893811366596314,1.38245879930619,5.67111037239834,4.48289453651807,4.68822033501084,0.837548997004143,1.68828783009504,1.5279824777681,1.76777151284201,2.98980529678116,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,0.628340120440365,0,0,0,0,1.49790639404823,0.915001205637253,1.7591609295801,1.21677024134594,2.30143911597297,1.24672826735736,0.162241263067758,0,0,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.60281927134286,0.816437989815934,1.0249097622788,0.937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36463917702604,4.42489833230923,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0,0,0,0.222798674082394,0,0,0.584511715822624,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,4.14292712856459,3.43737308063638,4.81188910562325,4.11049511862385,0,0.675022500231806,5.40385443869065,1.81256963593682,2.5888015587591,0.207574695168353,0,0.341467211508268,0.972426868273176,0,0.367687016900028,0.222246727801615,0.206035057238894,1.60459604795908,1.01078884705519,0.50695859978048,1.32038438970253,0.842773567228942,1.08842759088278,0.746661096422973,0.952587382566147,0.347652977834566,0.578727661391115,0,0.294397840268795,0.685738504770831,1.24233064311536,1.1921809497366,0.436039249896986,0.752875043322645,1.01537529470012,0.914639864363863,0.526139422875686,1.22223702461276,0,0.593175090620871,0.394017929502254,0,0.619747364743864,1.35034627686799,1.99848462350357,0.701794825336225,0.644613162144895,0.382576664137687,0,0|short_description=p10@Odz2}} | ||
|EntrezGene=23964 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt= | |||
|association_with_transcript=-168bp_to_ENSMUST00000149787,uc007ilm.1_5end | |||
|description=CAGE_peak_10_at_Odz2_5end | |||
|id=chr11:36491415..36491441,- | |||
|ontology_enrichment_celltype=CL:0000117!5.32e-21!23;CL:0000337!5.32e-21!23;CL:0000540!2.64e-15!33;CL:0000047!2.64e-15!33;CL:0000031!2.64e-15!33;CL:0000404!2.64e-15!33;CL:0000393!1.67e-11!39;CL:0000211!1.67e-11!39;CL:0002319!1.31e-09!43;CL:0000221!3.41e-09!44;CL:0000133!3.41e-09!44;CL:0000055!4.23e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.39e-28,23;CL:0000337,2.39e-28,23;CL:0000540,3.05e-18,33;CL:0000047,3.05e-18,33;CL:0000031,3.05e-18,33;CL:0000404,3.05e-18,33;CL:0000393,1.11e-14,39;CL:0000211,1.11e-14,39;CL:0002319,7.24e-13,43;CL:0000221,1.82e-12,44;CL:0000133,1.82e-12,44;CL:0000120,5.53e-08,3;CL:0002613,9.58e-08,3;CL:0002612,6.21e-07,3;CL:0002608,7.82e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.58e-28!52;UBERON:0005068!3.58e-28!52;UBERON:0006241!3.58e-28!52;UBERON:0007135!3.58e-28!52;UBERON:0001017!1.22e-27!73;UBERON:0005743!1.22e-27!73;UBERON:0002346!7.52e-27!71;UBERON:0003075!7.52e-27!71;UBERON:0007284!7.52e-27!71;UBERON:0000033!8.37e-27!63;UBERON:0000073!2.23e-26!75;UBERON:0001016!2.23e-26!75;UBERON:0000955!3.90e-26!50;UBERON:0006238!3.90e-26!50;UBERON:0003056!7.72e-26!49;UBERON:0002616!1.11e-25!49;UBERON:0002020!4.84e-25!34;UBERON:0004121!5.42e-23!102;UBERON:0000924!5.42e-23!102;UBERON:0006601!5.42e-23!102;UBERON:0003080!2.29e-22!40;UBERON:0002780!1.65e-21!39;UBERON:0001890!1.65e-21!39;UBERON:0006240!1.65e-21!39;UBERON:0002791!1.37e-20!29;UBERON:0003528!1.37e-20!29;UBERON:0001893!1.37e-20!29;UBERON:0007811!5.46e-15!86;UBERON:0000956!1.21e-13!21;UBERON:0001869!1.21e-13!21;UBERON:0000203!1.21e-13!21;UBERON:0000153!2.46e-12!94;UBERON:0002619!5.84e-11!17;UBERON:0002021!1.64e-08!10;UBERON:0000411!1.64e-08!10;UBERON:0001950!1.64e-08!10;UBERON:0002420!3.02e-08!8;UBERON:0007245!3.02e-08!8;UBERON:0010009!3.02e-08!8;UBERON:0010011!3.02e-08!8;UBERON:0000454!3.02e-08!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.44e-36,34;UBERON:0000073,6.78e-30,54;UBERON:0003528,7.27e-28,29;UBERON:0002791,7.27e-28,29;UBERON:0001893,7.27e-28,29;UBERON:0001049,3.81e-27,52;UBERON:0005068,3.81e-27,52;UBERON:0006241,3.81e-27,52;UBERON:0007135,3.81e-27,52;UBERON:0001017,8.43e-26,73;UBERON:0001016,6.87e-25,75;UBERON:0003080,1.17e-22,40;UBERON:0002346,3.15e-22,64;UBERON:0003075,3.15e-22,64;UBERON:0007284,3.15e-22,64;UBERON:0002780,2.97e-21,39;UBERON:0001890,2.97e-21,39;UBERON:0006240,2.97e-21,39;UBERON:0002616,9.08e-21,46;UBERON:0000955,3.42e-20,47;UBERON:0006238,3.42e-20,47;UBERON:0000956,1.28e-19,21;UBERON:0001869,1.28e-19,21;UBERON:0000203,1.28e-19,21;UBERON:0002619,2.90e-19,17;UBERON:0004121,3.88e-19,95;UBERON:0000924,3.88e-19,95;UBERON:0006601,3.88e-19,95;UBERON:0003056,5.59e-19,49;UBERON:0010371,1.48e-18,73;UBERON:0002021,2.96e-13,10;UBERON:0000411,2.96e-13,10;UBERON:0001950,2.96e-13,10;UBERON:0010314,3.52e-13,92;UBERON:0001948,1.08e-09,5;UBERON:0002315,1.08e-09,5;UBERON:0002420,2.91e-09,8;UBERON:0007245,2.91e-09,8;UBERON:0010009,2.91e-09,8;UBERON:0010011,2.91e-09,8;UBERON:0000454,2.91e-09,8;UBERON:0000025,1.89e-08,114;UBERON:0002240,5.15e-08,6;UBERON:0005174,5.15e-08,6;UBERON:0001137,5.15e-08,6;UBERON:0001954,1.68e-07,7;UBERON:0003022,1.68e-07,7;UBERON:0002421,1.68e-07,7;UBERON:0000349,1.68e-07,7;UBERON:0002600,1.68e-07,7;UBERON:0000369,1.69e-07,5;UBERON:0002435,1.69e-07,5;UBERON:0000204,1.69e-07,5;UBERON:0010082,1.69e-07,5;UBERON:0004111,1.91e-07,122;UBERON:0002257,6.21e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66486090406874,8.46385566835253,6.33831403506179,0,0,0,0,0,0,0,1.03689612308478,0.945041568321835,0.841299845405528,1.14260393761521,1.10434270475807,1.71487118900936,2.77951865952885,1.83843757322004,1.10115880999389,0.893811366596314,1.38245879930619,5.67111037239834,4.48289453651807,4.68822033501084,0.837548997004143,1.68828783009504,1.5279824777681,1.76777151284201,2.98980529678116,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,1.46390398505774,0.628340120440365,0,0,0,0,1.49790639404823,0.915001205637253,1.7591609295801,1.21677024134594,2.30143911597297,1.24672826735736,0.162241263067758,0,0,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.60281927134286,0.816437989815934,1.0249097622788,0.937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36463917702604,4.42489833230923,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0,0,0,0.222798674082394,0,0,0.584511715822624,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,4.14292712856459,3.43737308063638,4.81188910562325,4.11049511862385,0,0.675022500231806,5.40385443869065,1.81256963593682,2.5888015587591,0.207574695168353,0,0.341467211508268,0.972426868273176,0,0.367687016900028,0.222246727801615,0.206035057238894,1.60459604795908,1.01078884705519,0.50695859978048,1.32038438970253,0.842773567228942,1.08842759088278,0.746661096422973,0.952587382566147,0.347652977834566,0.578727661391115,0,0.294397840268795,0.685738504770831,1.24233064311536,1.1921809497366,0.436039249896986,0.752875043322645,1.01537529470012,0.914639864363863,0.526139422875686,1.22223702461276,0,0.593175090620871,0.394017929502254,0,0.619747364743864,1.35034627686799,1.99848462350357,0.701794825336225,0.644613162144895,0.382576664137687,0,0 | |||
|short_description=p10@Odz2 | |||
}} |
Revision as of 19:35, 12 September 2013
Short description: | p10@Odz2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Odz2_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -168bp_to_ENSMUST00000149787, uc007ilm.1_5end |
EntrezGene: | Odz2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.39e-28 | 23 |
neuroblast (sensu Vertebrata) | 2.39e-28 | 23 |
neuron | 3.05e-18 | 33 |
neuronal stem cell | 3.05e-18 | 33 |
neuroblast | 3.05e-18 | 33 |
electrically signaling cell | 3.05e-18 | 33 |
electrically responsive cell | 1.11e-14 | 39 |
electrically active cell | 1.11e-14 | 39 |
neural cell | 7.24e-13 | 43 |
ectodermal cell | 1.82e-12 | 44 |
neurectodermal cell | 1.82e-12 | 44 |
granule cell | 5.53e-08 | 3 |
striatum neuron | 9.58e-08 | 3 |
neuron of the ventral spinal cord | 6.21e-07 | 3 |
hippocampal neuron | 7.82e-07 | 3 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.