FFCP PHASE1:Mm9::chr12:104187412..104187443,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=217843|HGNC=|MCL_coexpression_id=1|UniProt=Q0KK59|association_with_transcript=343bp_to_ENSMUST00000101099,NM_001081017,uc007ouw.2,uc011yqs.1_5end|description=CAGE_peak_3_at_Unc79_5end|id=chr12:104187412..104187443,+|ontology_enrichment_celltype=CL:0000117!1.36e-13!23;CL:0000337!1.36e-13!23;CL:0000540!6.96e-12!33;CL:0000047!6.96e-12!33;CL:0000031!6.96e-12!33;CL:0000404!6.96e-12!33;CL:0000393!1.95e-08!39;CL:0000211!1.95e-08!39;CL:0000221!2.27e-07!44;CL:0000133!2.27e-07!44;CL:0002319!3.41e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.64e-23,23;CL:0000337,2.64e-23,23;CL:0000540,1.83e-14,33;CL:0000047,1.83e-14,33;CL:0000031,1.83e-14,33;CL:0000404,1.83e-14,33;CL:0000393,2.24e-11,39;CL:0000211,2.24e-11,39;CL:0002319,8.22e-10,43;CL:0000221,1.82e-09,44;CL:0000133,1.82e-09,44;CL:0002609,8.97e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.57e-27!71;UBERON:0003075!1.57e-27!71;UBERON:0007284!1.57e-27!71;UBERON:0001017!4.22e-26!73;UBERON:0005743!4.22e-26!73;UBERON:0000073!2.00e-25!75;UBERON:0001016!2.00e-25!75;UBERON:0001049!2.86e-25!52;UBERON:0005068!2.86e-25!52;UBERON:0006241!2.86e-25!52;UBERON:0007135!2.86e-25!52;UBERON:0000033!1.93e-24!63;UBERON:0000955!2.58e-24!50;UBERON:0006238!2.58e-24!50;UBERON:0002616!2.08e-23!49;UBERON:0004121!2.51e-22!102;UBERON:0000924!2.51e-22!102;UBERON:0006601!2.51e-22!102;UBERON:0003056!2.31e-21!49;UBERON:0003080!2.72e-20!40;UBERON:0002020!6.91e-20!34;UBERON:0002780!1.59e-19!39;UBERON:0001890!1.59e-19!39;UBERON:0006240!1.59e-19!39;UBERON:0002791!1.00e-16!29;UBERON:0003528!1.00e-16!29;UBERON:0001893!1.00e-16!29;UBERON:0007811!1.35e-13!86;UBERON:0000956!2.67e-13!21;UBERON:0001869!2.67e-13!21;UBERON:0000203!2.67e-13!21;UBERON:0000153!1.01e-10!94;UBERON:0002619!1.23e-10!17;UBERON:0002021!3.86e-09!10;UBERON:0000411!3.86e-09!10;UBERON:0001950!3.86e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-43,54;UBERON:0001049,8.98e-41,52;UBERON:0005068,8.98e-41,52;UBERON:0006241,8.98e-41,52;UBERON:0007135,8.98e-41,52;UBERON:0001017,2.81e-38,73;UBERON:0001016,6.42e-37,75;UBERON:0002020,2.32e-36,34;UBERON:0000955,3.37e-35,47;UBERON:0006238,3.37e-35,47;UBERON:0002346,1.51e-34,64;UBERON:0003075,1.51e-34,64;UBERON:0007284,1.51e-34,64;UBERON:0002616,1.36e-33,46;UBERON:0003080,2.16e-30,40;UBERON:0003528,2.20e-30,29;UBERON:0002791,2.20e-30,29;UBERON:0001893,2.20e-30,29;UBERON:0004121,2.63e-29,95;UBERON:0000924,2.63e-29,95;UBERON:0006601,2.63e-29,95;UBERON:0002780,5.11e-29,39;UBERON:0001890,5.11e-29,39;UBERON:0006240,5.11e-29,39;UBERON:0010371,7.74e-29,73;UBERON:0003056,1.40e-26,49;UBERON:0000956,7.81e-25,21;UBERON:0001869,7.81e-25,21;UBERON:0000203,7.81e-25,21;UBERON:0010314,1.78e-20,92;UBERON:0002619,8.57e-20,17;UBERON:0002021,8.77e-16,10;UBERON:0000411,8.77e-16,10;UBERON:0001950,8.77e-16,10;UBERON:0000025,1.59e-12,114;UBERON:0004111,5.27e-11,122;UBERON:0003076,3.00e-10,12;UBERON:0003057,3.00e-10,12;UBERON:0000369,1.15e-08,5;UBERON:0002435,1.15e-08,5;UBERON:0000204,1.15e-08,5;UBERON:0010082,1.15e-08,5;UBERON:0002240,6.65e-08,6;UBERON:0005174,6.65e-08,6;UBERON:0001137,6.65e-08,6;UBERON:0001948,5.88e-07,5;UBERON:0002315,5.88e-07,5;UBERON:0002420,7.57e-07,8;UBERON:0007245,7.57e-07,8;UBERON:0010009,7.57e-07,8;UBERON:0010011,7.57e-07,8;UBERON:0000454,7.57e-07,8|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03474691289397,2.64495489636016,1.26766280701236,0,0,0,0,0,0,0,3.00699875694585,2.8351247049655,1.47227472945967,2.28520787523043,1.32521124570968,3.91970557487853,3.45043695665651,1.83843757322004,3.30347642998166,1.78762273319263,1.99688493233117,2.90149833006426,3.20206752608434,3.64639359389732,0.279182999001381,0,1.22238598221448,1.76777151284201,2.98980529678116,2.42319279572891,0.075726193333184,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.29688427812965,0.520455980298408,0,0,0.753613202763113,0.352766121407114,0.251333182659351,0,0,0,0,0,0,0,2.92780797011547,3.14170060220183,0,0,0,0,3.2953940669061,5.94750783664214,4.90051973240171,4.51943232499919,5.37002460393694,3.53239675751252,4.54275536589721,0,0,0,0,0,0.459804208866946,0.180062129805349,0.753524089178575,0.748401490664606,1.5373646434182,0.843315521037559,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04246778825747,6.07137213037778,0.330418782983798,0,0,0,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,2.40825884981688,2.57865710502847,0,0.252470927204373,0.315508219416257,0.390438744296638,0.861693590931196,0,0,0,0.404810701674894,0,0.790575555893047,5.78378369559253,0,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0.754420319023592,0.295301892880773,0.614870295887855,0.775284879504663,0.363533729477506,1.78248689192361,3.16036757935816,0,1.03135543248187,4.08527526904546,0.18006109403131,0.129358683782755,0,0.354680467284547,0.713475270408282,0.822745103010605,1.2178597964584,0,0,0,0,0,0,0,0,0.291480836629851,1.48340241608408,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0,0,0.129614973291793,0,0,0,0,0.388902376688095,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,5.52390283808612,2.86447756719698,10.6548973053086,2.05524755931193,4.5323633843382,5.40018000185445,3.60256962579376,5.43770890781046,2.07104124700728,0.207574695168353,0.399024873401031,1.19513524027894,0.729320151204882,1.46729213839588,0,0.888986911206461,0.412070114477788,1.28367683836726,0.252697211763798,1.2673964994512,0.565879024158229,0.749132059759059,0.704276676453562,0.631790158511746,1.42888107384922,0.927074607558844,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.70990322463735,0.953744759789284,0.726732083161643,0.564656282491984,0.169229215783353,0.914639864363863,0.263069711437843,0.814824683075171,1.12228454331548,0.593175090620871,0.394017929502254,2.04615521584845,0.619747364743864,0.771626443924566,1.99848462350357,0.233931608445408,1.50409737833809,0,0,0.231867835620421|short_description=p3@Unc79}} | ||
|EntrezGene=217843 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q0KK59 | |||
|association_with_transcript=343bp_to_ENSMUST00000101099,NM_001081017,uc007ouw.2,uc011yqs.1_5end | |||
|description=CAGE_peak_3_at_Unc79_5end | |||
|id=chr12:104187412..104187443,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.36e-13!23;CL:0000337!1.36e-13!23;CL:0000540!6.96e-12!33;CL:0000047!6.96e-12!33;CL:0000031!6.96e-12!33;CL:0000404!6.96e-12!33;CL:0000393!1.95e-08!39;CL:0000211!1.95e-08!39;CL:0000221!2.27e-07!44;CL:0000133!2.27e-07!44;CL:0002319!3.41e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.64e-23,23;CL:0000337,2.64e-23,23;CL:0000540,1.83e-14,33;CL:0000047,1.83e-14,33;CL:0000031,1.83e-14,33;CL:0000404,1.83e-14,33;CL:0000393,2.24e-11,39;CL:0000211,2.24e-11,39;CL:0002319,8.22e-10,43;CL:0000221,1.82e-09,44;CL:0000133,1.82e-09,44;CL:0002609,8.97e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.57e-27!71;UBERON:0003075!1.57e-27!71;UBERON:0007284!1.57e-27!71;UBERON:0001017!4.22e-26!73;UBERON:0005743!4.22e-26!73;UBERON:0000073!2.00e-25!75;UBERON:0001016!2.00e-25!75;UBERON:0001049!2.86e-25!52;UBERON:0005068!2.86e-25!52;UBERON:0006241!2.86e-25!52;UBERON:0007135!2.86e-25!52;UBERON:0000033!1.93e-24!63;UBERON:0000955!2.58e-24!50;UBERON:0006238!2.58e-24!50;UBERON:0002616!2.08e-23!49;UBERON:0004121!2.51e-22!102;UBERON:0000924!2.51e-22!102;UBERON:0006601!2.51e-22!102;UBERON:0003056!2.31e-21!49;UBERON:0003080!2.72e-20!40;UBERON:0002020!6.91e-20!34;UBERON:0002780!1.59e-19!39;UBERON:0001890!1.59e-19!39;UBERON:0006240!1.59e-19!39;UBERON:0002791!1.00e-16!29;UBERON:0003528!1.00e-16!29;UBERON:0001893!1.00e-16!29;UBERON:0007811!1.35e-13!86;UBERON:0000956!2.67e-13!21;UBERON:0001869!2.67e-13!21;UBERON:0000203!2.67e-13!21;UBERON:0000153!1.01e-10!94;UBERON:0002619!1.23e-10!17;UBERON:0002021!3.86e-09!10;UBERON:0000411!3.86e-09!10;UBERON:0001950!3.86e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.50e-43,54;UBERON:0001049,8.98e-41,52;UBERON:0005068,8.98e-41,52;UBERON:0006241,8.98e-41,52;UBERON:0007135,8.98e-41,52;UBERON:0001017,2.81e-38,73;UBERON:0001016,6.42e-37,75;UBERON:0002020,2.32e-36,34;UBERON:0000955,3.37e-35,47;UBERON:0006238,3.37e-35,47;UBERON:0002346,1.51e-34,64;UBERON:0003075,1.51e-34,64;UBERON:0007284,1.51e-34,64;UBERON:0002616,1.36e-33,46;UBERON:0003080,2.16e-30,40;UBERON:0003528,2.20e-30,29;UBERON:0002791,2.20e-30,29;UBERON:0001893,2.20e-30,29;UBERON:0004121,2.63e-29,95;UBERON:0000924,2.63e-29,95;UBERON:0006601,2.63e-29,95;UBERON:0002780,5.11e-29,39;UBERON:0001890,5.11e-29,39;UBERON:0006240,5.11e-29,39;UBERON:0010371,7.74e-29,73;UBERON:0003056,1.40e-26,49;UBERON:0000956,7.81e-25,21;UBERON:0001869,7.81e-25,21;UBERON:0000203,7.81e-25,21;UBERON:0010314,1.78e-20,92;UBERON:0002619,8.57e-20,17;UBERON:0002021,8.77e-16,10;UBERON:0000411,8.77e-16,10;UBERON:0001950,8.77e-16,10;UBERON:0000025,1.59e-12,114;UBERON:0004111,5.27e-11,122;UBERON:0003076,3.00e-10,12;UBERON:0003057,3.00e-10,12;UBERON:0000369,1.15e-08,5;UBERON:0002435,1.15e-08,5;UBERON:0000204,1.15e-08,5;UBERON:0010082,1.15e-08,5;UBERON:0002240,6.65e-08,6;UBERON:0005174,6.65e-08,6;UBERON:0001137,6.65e-08,6;UBERON:0001948,5.88e-07,5;UBERON:0002315,5.88e-07,5;UBERON:0002420,7.57e-07,8;UBERON:0007245,7.57e-07,8;UBERON:0010009,7.57e-07,8;UBERON:0010011,7.57e-07,8;UBERON:0000454,7.57e-07,8 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0.22940928106717,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03474691289397,2.64495489636016,1.26766280701236,0,0,0,0,0,0,0,3.00699875694585,2.8351247049655,1.47227472945967,2.28520787523043,1.32521124570968,3.91970557487853,3.45043695665651,1.83843757322004,3.30347642998166,1.78762273319263,1.99688493233117,2.90149833006426,3.20206752608434,3.64639359389732,0.279182999001381,0,1.22238598221448,1.76777151284201,2.98980529678116,2.42319279572891,0.075726193333184,0,0,0,0,0,0.649776417447669,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0.29688427812965,0.520455980298408,0,0,0.753613202763113,0.352766121407114,0.251333182659351,0,0,0,0,0,0,0,2.92780797011547,3.14170060220183,0,0,0,0,3.2953940669061,5.94750783664214,4.90051973240171,4.51943232499919,5.37002460393694,3.53239675751252,4.54275536589721,0,0,0,0,0,0.459804208866946,0.180062129805349,0.753524089178575,0.748401490664606,1.5373646434182,0.843315521037559,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04246778825747,6.07137213037778,0.330418782983798,0,0,0,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,2.40825884981688,2.57865710502847,0,0.252470927204373,0.315508219416257,0.390438744296638,0.861693590931196,0,0,0,0.404810701674894,0,0.790575555893047,5.78378369559253,0,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0.754420319023592,0.295301892880773,0.614870295887855,0.775284879504663,0.363533729477506,1.78248689192361,3.16036757935816,0,1.03135543248187,4.08527526904546,0.18006109403131,0.129358683782755,0,0.354680467284547,0.713475270408282,0.822745103010605,1.2178597964584,0,0,0,0,0,0,0,0,0.291480836629851,1.48340241608408,0,0,0,0.188368457004691,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0,0,0.129614973291793,0,0,0,0,0.388902376688095,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,5.52390283808612,2.86447756719698,10.6548973053086,2.05524755931193,4.5323633843382,5.40018000185445,3.60256962579376,5.43770890781046,2.07104124700728,0.207574695168353,0.399024873401031,1.19513524027894,0.729320151204882,1.46729213839588,0,0.888986911206461,0.412070114477788,1.28367683836726,0.252697211763798,1.2673964994512,0.565879024158229,0.749132059759059,0.704276676453562,0.631790158511746,1.42888107384922,0.927074607558844,0.192909220463705,0.412085900803307,0.441596760403192,0.685738504770831,0.70990322463735,0.953744759789284,0.726732083161643,0.564656282491984,0.169229215783353,0.914639864363863,0.263069711437843,0.814824683075171,1.12228454331548,0.593175090620871,0.394017929502254,2.04615521584845,0.619747364743864,0.771626443924566,1.99848462350357,0.233931608445408,1.50409737833809,0,0,0.231867835620421 | |||
|short_description=p3@Unc79 | |||
}} |
Revision as of 22:01, 12 September 2013
Short description: | p3@Unc79 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Unc79_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 343bp_to_ENSMUST00000101099, NM_001081017, uc007ouw.2, uc011yqs.1_5end |
EntrezGene: | Unc79 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.64e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.64e-23 | 23 |
neuron | 1.83e-14 | 33 |
neuronal stem cell | 1.83e-14 | 33 |
neuroblast | 1.83e-14 | 33 |
electrically signaling cell | 1.83e-14 | 33 |
electrically responsive cell | 2.24e-11 | 39 |
electrically active cell | 2.24e-11 | 39 |
neural cell | 8.22e-10 | 43 |
ectodermal cell | 1.82e-09 | 44 |
neurectodermal cell | 1.82e-09 | 44 |
neuron of cerebral cortex | 8.97e-09 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.