FFCP PHASE1:Hg19::chr3:48264976..48265003,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=820|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1472|TSSclassifier=S|UniProt=P49913|association_with_transcript=114bp_to_uc003csj.1_5end|coexpression_cluster_id=C39|description=CAGE_peak_1_at_CAMP_5end|id=chr3:48264976..48265003,+|ontology_enrichment_celltype=CL:0000766!7.38e-18!76;CL:0000738!3.88e-15!140;CL:0000094!4.90e-13!8;CL:0002194!1.53e-12!63;CL:0000576!1.53e-12!63;CL:0000040!1.53e-12!63;CL:0000559!1.53e-12!63;CL:0002009!6.97e-12!65;CL:0002057!7.84e-12!42;CL:0002087!1.37e-11!119;CL:0000037!2.37e-11!172;CL:0000566!2.37e-11!172;CL:0000860!1.38e-10!45;CL:0000839!2.06e-10!70;CL:0000557!3.81e-10!71;CL:0000763!6.43e-10!112;CL:0000049!6.43e-10!112;CL:0000988!6.93e-10!182;CL:0002032!3.35e-09!165;CL:0000837!3.35e-09!165;CL:0000081!7.06e-09!11;CL:0002031!1.76e-08!124|ontology_enrichment_celltype_v019=CL:0000094;3.23e-28;8!CL:0000081;4.05e-20;11!CL:0000767;1.03e-11;3!CL:0000775;2.23e-11;3!CL:0000771;1.37e-08;2!CL:0000473;7.89e-08;39!CL:0000234;7.89e-08;39!CL:0000575;9.22e-08;2!CL:0000860;5.22e-07;33!CL:0002057;5.22e-07;33|ontology_enrichment_celltype_v019_2=CL:0000094,3.03e-28,8;CL:0000081,3.87e-20,11;CL:0000766,6.62e-14,72;CL:0000767,1.25e-11,3;CL:0000775,1.72e-11,3;CL:0000738,3.39e-10,136;CL:0000763,1.08e-08,108;CL:0000049,1.08e-08,108;CL:0000771,1.38e-08,2;CL:0000575,6.77e-08,2;CL:0000037,6.83e-08,168;CL:0000473,1.77e-07,48;CL:0000234,1.77e-07,48;CL:0000988,3.44e-07,177|ontology_enrichment_development_v019=UBERON:0004872;1.16e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.88e-19!102;UBERON:0003061!5.88e-19!102;UBERON:0002193!8.30e-17!112;UBERON:0007023!3.88e-15!115;UBERON:0000178!2.33e-13!15;UBERON:0000179!2.33e-13!15;UBERON:0000463!2.33e-13!15;UBERON:0002371!9.16e-09!80;UBERON:0001474!1.40e-07!86;UBERON:0002405!1.93e-07!115|ontology_enrichment_uberon_v019=UBERON:0000178;3.85e-26;15!UBERON:0000179;3.85e-26;15!UBERON:0000463;3.85e-26;15!UBERON:0002390;1.70e-16;32!UBERON:0002193;1.55e-08;42!UBERON:0002370;1.67e-07;2!UBERON:0005058;1.67e-07;2!UBERON:0009113;1.67e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.33e-26,15;UBERON:0000179,4.33e-26,15;UBERON:0000463,4.33e-26,15;UBERON:0002390,1.15e-16,98;UBERON:0003061,1.15e-16,98;UBERON:0002193,1.54e-14,108;UBERON:0007023,3.91e-09,114;UBERON:0003081,2.73e-08,203|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,38.9430634080415,43.372721984985,2.16742572642506,0,0,0.369754010166788,1.08454080812422,2.70121541726101,0.293600439334847,0,0.200544447470142,0,0.671746422719773,0.971680998056939,0.77272670290256,2.76256653681173,0,0,2.78914844286822,0,0,1.43846196161075,0,0.236482229888585,1.72372840368309,0,0,2.07066573496865,0,0.449446968890169,4.59125838556354,0.320929027076094,0,2.30895910130701,0.199463657621632,0,2.90209238628584,0,0,3.76872997885115,0.521482918420201,0,1.81619850790011,0.368277635987565,0.632924774881769,0,0,0.209658645508376,0.112328631146495,0.300353785683013,0,0.285012743741249,0.19891667719909,0.182664153764634,0,1.09227722252426,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96468613246569,2.91436230634034,2.96627554227544,0,0,0,0,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,42.6558290563158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.73709131131337,2.99161459204025,7.87389475528467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,4.74571241800957,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.564862804660675,0,0,0,0,4.56702848308952,9.94028369285088,7.40541343326411,1.19115887728894,1.23408681925858,9.07862635669804,8.10047155857172,12.6900028207083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0.614481528616916,0,0.333698283423817,1.36771666781428,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0.246169610922139,0,0,0.179021174675609,0,0.197286811273867,14.3689855408164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0.18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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=820 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1472 | |||
|TSSclassifier=S | |||
|UniProt=P49913 | |||
|association_with_transcript=114bp_to_uc003csj.1_5end | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_1_at_CAMP_5end | |||
|id=chr3:48264976..48265003,+ | |||
|ontology_enrichment_celltype=CL:0000766!7.38e-18!76;CL:0000738!3.88e-15!140;CL:0000094!4.90e-13!8;CL:0002194!1.53e-12!63;CL:0000576!1.53e-12!63;CL:0000040!1.53e-12!63;CL:0000559!1.53e-12!63;CL:0002009!6.97e-12!65;CL:0002057!7.84e-12!42;CL:0002087!1.37e-11!119;CL:0000037!2.37e-11!172;CL:0000566!2.37e-11!172;CL:0000860!1.38e-10!45;CL:0000839!2.06e-10!70;CL:0000557!3.81e-10!71;CL:0000763!6.43e-10!112;CL:0000049!6.43e-10!112;CL:0000988!6.93e-10!182;CL:0002032!3.35e-09!165;CL:0000837!3.35e-09!165;CL:0000081!7.06e-09!11;CL:0002031!1.76e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000094;3.23e-28;8!CL:0000081;4.05e-20;11!CL:0000767;1.03e-11;3!CL:0000775;2.23e-11;3!CL:0000771;1.37e-08;2!CL:0000473;7.89e-08;39!CL:0000234;7.89e-08;39!CL:0000575;9.22e-08;2!CL:0000860;5.22e-07;33!CL:0002057;5.22e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.03e-28,8;CL:0000081,3.87e-20,11;CL:0000766,6.62e-14,72;CL:0000767,1.25e-11,3;CL:0000775,1.72e-11,3;CL:0000738,3.39e-10,136;CL:0000763,1.08e-08,108;CL:0000049,1.08e-08,108;CL:0000771,1.38e-08,2;CL:0000575,6.77e-08,2;CL:0000037,6.83e-08,168;CL:0000473,1.77e-07,48;CL:0000234,1.77e-07,48;CL:0000988,3.44e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.16e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.88e-19!102;UBERON:0003061!5.88e-19!102;UBERON:0002193!8.30e-17!112;UBERON:0007023!3.88e-15!115;UBERON:0000178!2.33e-13!15;UBERON:0000179!2.33e-13!15;UBERON:0000463!2.33e-13!15;UBERON:0002371!9.16e-09!80;UBERON:0001474!1.40e-07!86;UBERON:0002405!1.93e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.85e-26;15!UBERON:0000179;3.85e-26;15!UBERON:0000463;3.85e-26;15!UBERON:0002390;1.70e-16;32!UBERON:0002193;1.55e-08;42!UBERON:0002370;1.67e-07;2!UBERON:0005058;1.67e-07;2!UBERON:0009113;1.67e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.33e-26,15;UBERON:0000179,4.33e-26,15;UBERON:0000463,4.33e-26,15;UBERON:0002390,1.15e-16,98;UBERON:0003061,1.15e-16,98;UBERON:0002193,1.54e-14,108;UBERON:0007023,3.91e-09,114;UBERON:0003081,2.73e-08,203 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.0787107813136792,38.9430634080415,43.372721984985,2.16742572642506,0,0,0.369754010166788,1.08454080812422,2.70121541726101,0.293600439334847,0,0.200544447470142,0,0.671746422719773,0.971680998056939,0.77272670290256,2.76256653681173,0,0,2.78914844286822,0,0,1.43846196161075,0,0.236482229888585,1.72372840368309,0,0,2.07066573496865,0,0.449446968890169,4.59125838556354,0.320929027076094,0,2.30895910130701,0.199463657621632,0,2.90209238628584,0,0,3.76872997885115,0.521482918420201,0,1.81619850790011,0.368277635987565,0.632924774881769,0,0,0.209658645508376,0.112328631146495,0.300353785683013,0,0.285012743741249,0.19891667719909,0.182664153764634,0,1.09227722252426,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,2.24203425192614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96468613246569,2.91436230634034,2.96627554227544,0,0,0,0,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,42.6558290563158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.73709131131337,2.99161459204025,7.87389475528467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,4.74571241800957,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368323955743585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.564862804660675,0,0,0,0,4.56702848308952,9.94028369285088,7.40541343326411,1.19115887728894,1.23408681925858,9.07862635669804,8.10047155857172,12.6900028207083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687010689511529,0.614481528616916,0,0.333698283423817,1.36771666781428,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0.246169610922139,0,0,0.179021174675609,0,0.197286811273867,14.3689855408164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0.182454789215666,0,0,40.6421934934872,1.20990716048664,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0.569219092059585,0,0,0,0,910.325941540977,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20930250476107,0,0,0,0,0,0,0.254019996197353,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.419636705079985,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0.339936274560377,0.146552233678082,7.95041333473328,0.129282956361551,0,0,0,4.27149650270779,0.628817220398664,1.24271716604159,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0,0,0,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0.533458648470704,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.126831620387814,0,2.74128883428591,0,0,0.127762427639595,0,0,0.606965604236632,0,1.50794029276486,0.345701962667338,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.51215543128185,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,3.39997695141398,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,2.9585900930838,0,0.657887425858975,8.63735698845934,0,0,0,0,0.730336388246517,0,0,0,0,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,19.1720106492146,4.55539021265503,0,0.103432995861895,24.9483758824148,0,1.67931165573616,2.97958628620118,0,0.318235791390825,0,0.435433495793923,0.342233301085281,0.26940821205835,1.14755528628282,0.99798106963804,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0 | |||
|short_description=p1@CAMP | |||
}} |
Revision as of 00:27, 13 September 2013
Short description: | p1@CAMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_CAMP_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 114bp_to_uc003csj.1_5end |
EntrezGene: | CAMP |
HGNC: | 1472 |
UniProt: | P49913 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.03e-28 | 8 |
blood cell | 3.87e-20 | 11 |
myeloid leukocyte | 6.62e-14 | 72 |
basophil | 1.25e-11 | 3 |
neutrophil | 1.72e-11 | 3 |
leukocyte | 3.39e-10 | 136 |
myeloid cell | 1.08e-08 | 108 |
common myeloid progenitor | 1.08e-08 | 108 |
eosinophil | 1.38e-08 | 2 |
corneal epithelial cell | 6.77e-08 | 2 |
hematopoietic stem cell | 6.83e-08 | 168 |
defensive cell | 1.77e-07 | 48 |
phagocyte | 1.77e-07 | 48 |
hematopoietic cell | 3.44e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 4.33e-26 | 15 |
haemolymphatic fluid | 4.33e-26 | 15 |
organism substance | 4.33e-26 | 15 |
hematopoietic system | 1.15e-16 | 98 |
blood island | 1.15e-16 | 98 |
hemolymphoid system | 1.54e-14 | 108 |
adult organism | 3.91e-09 | 114 |
lateral plate mesoderm | 2.73e-08 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.