FFCP PHASE1:Mm9::chr13:54828152..54828163,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=126|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:54828152..54828163,+|id=chr13:54828152..54828163,+|ontology_enrichment_celltype=CL:0000239!5.97e-11!6;CL:0000677!5.97e-11!6;CL:0000212!5.97e-11!6;CL:0000584!5.97e-11!6;CL:0000075!2.95e-09!7;CL:0002563!2.99e-09!9;CL:0002251!2.99e-09!9;CL:0000473!9.74e-07!3;CL:0000627!9.74e-07!3;CL:0000682!9.74e-07!3|ontology_enrichment_celltype_v019_2=CL:0000682,6.77e-13,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.28e-21!43;UBERON:0000344!1.35e-19!15;UBERON:0005409!1.27e-16!59;UBERON:0001242!5.78e-16!13;UBERON:0000060!5.78e-16!13;UBERON:0001262!5.78e-16!13;UBERON:0004786!5.78e-16!13;UBERON:0004923!6.46e-13!24;UBERON:0003350!2.99e-09!9;UBERON:0004808!2.99e-09!9;UBERON:0001277!2.99e-09!9;UBERON:0000485!2.40e-07!11;UBERON:0000331!8.56e-07!3;UBERON:0002116!8.56e-07!3;UBERON:0001204!8.56e-07!3;UBERON:0001168!8.56e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.56e-27,31;UBERON:0000344,1.98e-21,15;UBERON:0005409,2.51e-19,47;UBERON:0002108,1.72e-16,4;UBERON:0004923,6.53e-16,24;UBERON:0001242,6.50e-15,13;UBERON:0001262,6.50e-15,13;UBERON:0004786,6.50e-15,13;UBERON:0000331,5.12e-13,3;UBERON:0002116,5.12e-13,3;UBERON:0001204,5.12e-13,3;UBERON:0001168,5.12e-13,3;UBERON:0001962,8.48e-10,2;UBERON:0001961,8.48e-10,2;UBERON:0001744,8.48e-10,2;UBERON:0001007,2.16e-08,116;UBERON:0001555,2.16e-08,116;UBERON:0007026,2.16e-08,116;UBERON:0004119,3.39e-08,118;UBERON:0000925,3.39e-08,118;UBERON:0006595,3.39e-08,118;UBERON:0002465,8.61e-07,3|phase1_expression=0,1.04692622291808,0.909998478779072,3.0246421130683,2.50447864973174,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.51983330145495,4.35877634027623,2.29692785646008,3.4460959692726,1.29282739611533,10.6413114895569,1.51218077855958,1.99557459589774,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,1.85115396664481,0,0,0.257734922644187,0.403367049246685,0,0.760902504450237,2.84717436926707,2.9645811850322,2.26201687920243,0.397912944082302,0,1.79763881730844,1.94524244887225,0.995706366271836,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr13:54828152..54828163,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=126 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:54828152..54828163,+ | |||
|id=chr13:54828152..54828163,+ | |||
|ontology_enrichment_celltype=CL:0000239!5.97e-11!6;CL:0000677!5.97e-11!6;CL:0000212!5.97e-11!6;CL:0000584!5.97e-11!6;CL:0000075!2.95e-09!7;CL:0002563!2.99e-09!9;CL:0002251!2.99e-09!9;CL:0000473!9.74e-07!3;CL:0000627!9.74e-07!3;CL:0000682!9.74e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,6.77e-13,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.28e-21!43;UBERON:0000344!1.35e-19!15;UBERON:0005409!1.27e-16!59;UBERON:0001242!5.78e-16!13;UBERON:0000060!5.78e-16!13;UBERON:0001262!5.78e-16!13;UBERON:0004786!5.78e-16!13;UBERON:0004923!6.46e-13!24;UBERON:0003350!2.99e-09!9;UBERON:0004808!2.99e-09!9;UBERON:0001277!2.99e-09!9;UBERON:0000485!2.40e-07!11;UBERON:0000331!8.56e-07!3;UBERON:0002116!8.56e-07!3;UBERON:0001204!8.56e-07!3;UBERON:0001168!8.56e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.56e-27,31;UBERON:0000344,1.98e-21,15;UBERON:0005409,2.51e-19,47;UBERON:0002108,1.72e-16,4;UBERON:0004923,6.53e-16,24;UBERON:0001242,6.50e-15,13;UBERON:0001262,6.50e-15,13;UBERON:0004786,6.50e-15,13;UBERON:0000331,5.12e-13,3;UBERON:0002116,5.12e-13,3;UBERON:0001204,5.12e-13,3;UBERON:0001168,5.12e-13,3;UBERON:0001962,8.48e-10,2;UBERON:0001961,8.48e-10,2;UBERON:0001744,8.48e-10,2;UBERON:0001007,2.16e-08,116;UBERON:0001555,2.16e-08,116;UBERON:0007026,2.16e-08,116;UBERON:0004119,3.39e-08,118;UBERON:0000925,3.39e-08,118;UBERON:0006595,3.39e-08,118;UBERON:0002465,8.61e-07,3 | |||
|phase1_expression=0,1.04692622291808,0.909998478779072,3.0246421130683,2.50447864973174,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,3.51983330145495,4.35877634027623,2.29692785646008,3.4460959692726,1.29282739611533,10.6413114895569,1.51218077855958,1.99557459589774,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,2.22475470960936,0,0,0,0,0,0,0,0,1.27728527604296,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28670052774077,1.85115396664481,0,0,0.257734922644187,0.403367049246685,0,0.760902504450237,2.84717436926707,2.9645811850322,2.26201687920243,0.397912944082302,0,1.79763881730844,1.94524244887225,0.995706366271836,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0.123397163921801,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:54828152..54828163,+ | |||
}} |
Revision as of 00:48, 13 September 2013
Short description: | p@chr13:54828152..54828163, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:54828152..54828163, + |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 6.77e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.56e-27 | 31 |
mucosa | 1.98e-21 | 15 |
gastrointestinal system | 2.51e-19 | 47 |
small intestine | 1.72e-16 | 4 |
organ component layer | 6.53e-16 | 24 |
intestinal mucosa | 6.50e-15 | 13 |
wall of intestine | 6.50e-15 | 13 |
gastrointestinal system mucosa | 6.50e-15 | 13 |
ileal mucosa | 5.12e-13 | 3 |
ileum | 5.12e-13 | 3 |
mucosa of small intestine | 5.12e-13 | 3 |
wall of small intestine | 5.12e-13 | 3 |
gut-associated lymphoid tissue | 8.48e-10 | 2 |
mucosa-associated lymphoid tissue | 8.48e-10 | 2 |
lymphoid tissue | 8.48e-10 | 2 |
digestive system | 2.16e-08 | 116 |
digestive tract | 2.16e-08 | 116 |
primitive gut | 2.16e-08 | 116 |
endoderm-derived structure | 3.39e-08 | 118 |
endoderm | 3.39e-08 | 118 |
presumptive endoderm | 3.39e-08 | 118 |
lymphoid system | 8.61e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.