FFCP PHASE1:Mm9::chr14:115491466..115491500,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=103978|HGNC=|MCL_coexpression_id=1|UniProt=Q8CAL5|association_with_transcript=29bp_to_ENSMUST00000022707,NM_175500,uc007uyh.2,uc007uyi.2_5end|description=CAGE_peak_1_at_Gpc5_5end|id=chr14:115491466..115491500,+|ontology_enrichment_celltype=CL:0000117!1.29e-08!23;CL:0000337!1.29e-08!23;CL:0000540!4.55e-07!33;CL:0000047!4.55e-07!33;CL:0000031!4.55e-07!33;CL:0000404!4.55e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,8.51e-09,23;CL:0000337,8.51e-09,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.66e-19!73;UBERON:0005743!4.66e-19!73;UBERON:0000073!1.18e-18!75;UBERON:0001016!1.18e-18!75;UBERON:0001049!8.32e-18!52;UBERON:0005068!8.32e-18!52;UBERON:0006241!8.32e-18!52;UBERON:0007135!8.32e-18!52;UBERON:0000955!7.37e-17!50;UBERON:0006238!7.37e-17!50;UBERON:0002616!2.90e-16!49;UBERON:0000033!1.59e-15!63;UBERON:0002346!2.86e-14!71;UBERON:0003075!2.86e-14!71;UBERON:0007284!2.86e-14!71;UBERON:0004121!3.40e-14!102;UBERON:0000924!3.40e-14!102;UBERON:0006601!3.40e-14!102;UBERON:0003080!1.38e-13!40;UBERON:0000153!2.24e-13!94;UBERON:0002020!3.67e-13!34;UBERON:0002780!6.82e-13!39;UBERON:0001890!6.82e-13!39;UBERON:0006240!6.82e-13!39;UBERON:0003056!8.85e-13!49;UBERON:0007811!3.44e-12!86;UBERON:0002791!1.83e-10!29;UBERON:0003528!1.83e-10!29;UBERON:0001893!1.83e-10!29;UBERON:0000489!2.02e-08!21;UBERON:0002021!7.34e-08!10;UBERON:0000411!7.34e-08!10;UBERON:0001950!7.34e-08!10;UBERON:0002619!4.01e-07!17;UBERON:0000956!8.43e-07!21;UBERON:0001869!8.43e-07!21;UBERON:0000203!8.43e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.64e-23,54;UBERON:0001049,2.19e-21,52;UBERON:0005068,2.19e-21,52;UBERON:0006241,2.19e-21,52;UBERON:0007135,2.19e-21,52;UBERON:0001017,1.18e-20,73;UBERON:0001016,1.34e-19,75;UBERON:0000955,1.74e-17,47;UBERON:0006238,1.74e-17,47;UBERON:0002616,1.00e-16,46;UBERON:0003080,5.18e-15,40;UBERON:0002020,8.59e-15,34;UBERON:0002346,1.82e-14,64;UBERON:0003075,1.82e-14,64;UBERON:0007284,1.82e-14,64;UBERON:0002780,4.05e-14,39;UBERON:0001890,4.05e-14,39;UBERON:0006240,4.05e-14,39;UBERON:0010371,7.02e-14,73;UBERON:0004121,9.70e-14,95;UBERON:0000924,9.70e-14,95;UBERON:0006601,9.70e-14,95;UBERON:0003528,2.92e-11,29;UBERON:0002791,2.92e-11,29;UBERON:0001893,2.92e-11,29;UBERON:0000489,8.18e-11,21;UBERON:0002021,3.19e-10,10;UBERON:0000411,3.19e-10,10;UBERON:0001950,3.19e-10,10;UBERON:0003056,3.24e-10,49;UBERON:0010314,4.18e-08,92;UBERON:0002619,1.26e-07,17;UBERON:0002113,3.33e-07,14;UBERON:0003918,3.33e-07,14;UBERON:0011143,3.33e-07,14;UBERON:0005095,3.33e-07,14;UBERON:0007687,3.33e-07,14;UBERON:0003076,3.57e-07,12;UBERON:0003057,3.57e-07,12|phase1_expression=2.88267924788629,0,0,0,0,0,0,0.129123323441576,1.267098499365,2.57470978954193,0,0.159544317990673,0.342401459862411,0.174840804837995,0,0,0,0,0,0,5.6128571499706,6.25532992565577,5.74639536105658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,4.65327859977075,5.81890077199236,2.53532561402472,0,0,0,0,0.7104801149461,0.299600110518405,1.15265491596466,0.311068836925433,0.945041568321835,0,29.4220513935918,25.8416192913388,1.22490799214954,0.575072826109418,0.919218786610021,75.9799578895782,46.4781910630083,44.8531077108231,3.29715719325485,2.10421580285542,3.12548022334056,48.5778418262403,42.207195752376,41.2555268997387,35.6500588423138,25.0574158206421,15.6575534493252,0.302904773332736,0.151143120213571,0.579728977403356,0,0,0,0,0,0.983110940922263,0,0,0,8.16891834704747,0,0,0,0,0,0,1.37020655662872,0,0,0.173485326766136,0,0,0.301445281105245,0.117588707135705,4.02133092254962,0,0,0,0.161766849947409,0,0,0,9.07620470735796,5.44561437714983,0,0.11981512450592,0,0,70.102019241457,64.5075849974263,4.52355667606312,50.7567014961447,47.8187905207718,51.94701113989,43.1561759760235,4.48093200941392,0.995255764880744,3.0326731012041,0,0.780722657776222,0.459804208866946,0.180062129805349,0.452114453507145,0.95251098811859,0.768682321709099,0.843315521037559,0.517406741478031,1.07783996466421,3.78212160335639,2.81521798662318,1.53437012699302,2.78047249225598,0.696504333044333,0.823128545631774,0.796137067273973,0,0,0,0.621377317606506,0.703578179943289,0.36012412292203,1.18372367792605,0.393528463494808,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,50.0490077582623,2.6755199218614,0,0,0,0.464473343720877,0.257734922644187,0.80673409849337,0.22237804384487,0.380451252225118,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,2.84501851429623,8.3401414205102,18.0332377076929,25.252764652819,28.511015613641,26.5814757384307,31.1756128022588,12.5468625782662,10.9899109488962,4.68909222902842,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,0,0.390267295715598,0,0,0,0,0.172684981865896,0,0,0,0,0,65.1835395350435,47.9395798162111,0,0,0.631016438832513,0,0.6462701931983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| ||
|EntrezGene=103978 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8CAL5 | |||
|association_with_transcript=29bp_to_ENSMUST00000022707,NM_175500,uc007uyh.2,uc007uyi.2_5end | |||
|description=CAGE_peak_1_at_Gpc5_5end | |||
|id=chr14:115491466..115491500,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.29e-08!23;CL:0000337!1.29e-08!23;CL:0000540!4.55e-07!33;CL:0000047!4.55e-07!33;CL:0000031!4.55e-07!33;CL:0000404!4.55e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.51e-09,23;CL:0000337,8.51e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.66e-19!73;UBERON:0005743!4.66e-19!73;UBERON:0000073!1.18e-18!75;UBERON:0001016!1.18e-18!75;UBERON:0001049!8.32e-18!52;UBERON:0005068!8.32e-18!52;UBERON:0006241!8.32e-18!52;UBERON:0007135!8.32e-18!52;UBERON:0000955!7.37e-17!50;UBERON:0006238!7.37e-17!50;UBERON:0002616!2.90e-16!49;UBERON:0000033!1.59e-15!63;UBERON:0002346!2.86e-14!71;UBERON:0003075!2.86e-14!71;UBERON:0007284!2.86e-14!71;UBERON:0004121!3.40e-14!102;UBERON:0000924!3.40e-14!102;UBERON:0006601!3.40e-14!102;UBERON:0003080!1.38e-13!40;UBERON:0000153!2.24e-13!94;UBERON:0002020!3.67e-13!34;UBERON:0002780!6.82e-13!39;UBERON:0001890!6.82e-13!39;UBERON:0006240!6.82e-13!39;UBERON:0003056!8.85e-13!49;UBERON:0007811!3.44e-12!86;UBERON:0002791!1.83e-10!29;UBERON:0003528!1.83e-10!29;UBERON:0001893!1.83e-10!29;UBERON:0000489!2.02e-08!21;UBERON:0002021!7.34e-08!10;UBERON:0000411!7.34e-08!10;UBERON:0001950!7.34e-08!10;UBERON:0002619!4.01e-07!17;UBERON:0000956!8.43e-07!21;UBERON:0001869!8.43e-07!21;UBERON:0000203!8.43e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.64e-23,54;UBERON:0001049,2.19e-21,52;UBERON:0005068,2.19e-21,52;UBERON:0006241,2.19e-21,52;UBERON:0007135,2.19e-21,52;UBERON:0001017,1.18e-20,73;UBERON:0001016,1.34e-19,75;UBERON:0000955,1.74e-17,47;UBERON:0006238,1.74e-17,47;UBERON:0002616,1.00e-16,46;UBERON:0003080,5.18e-15,40;UBERON:0002020,8.59e-15,34;UBERON:0002346,1.82e-14,64;UBERON:0003075,1.82e-14,64;UBERON:0007284,1.82e-14,64;UBERON:0002780,4.05e-14,39;UBERON:0001890,4.05e-14,39;UBERON:0006240,4.05e-14,39;UBERON:0010371,7.02e-14,73;UBERON:0004121,9.70e-14,95;UBERON:0000924,9.70e-14,95;UBERON:0006601,9.70e-14,95;UBERON:0003528,2.92e-11,29;UBERON:0002791,2.92e-11,29;UBERON:0001893,2.92e-11,29;UBERON:0000489,8.18e-11,21;UBERON:0002021,3.19e-10,10;UBERON:0000411,3.19e-10,10;UBERON:0001950,3.19e-10,10;UBERON:0003056,3.24e-10,49;UBERON:0010314,4.18e-08,92;UBERON:0002619,1.26e-07,17;UBERON:0002113,3.33e-07,14;UBERON:0003918,3.33e-07,14;UBERON:0011143,3.33e-07,14;UBERON:0005095,3.33e-07,14;UBERON:0007687,3.33e-07,14;UBERON:0003076,3.57e-07,12;UBERON:0003057,3.57e-07,12 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0.129123323441576,1.267098499365,2.57470978954193,0,0.159544317990673,0.342401459862411,0.174840804837995,0,0,0,0,0,0,5.6128571499706,6.25532992565577,5.74639536105658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0.336093799142464,0,0,0,4.65327859977075,5.81890077199236,2.53532561402472,0,0,0,0,0.7104801149461,0.299600110518405,1.15265491596466,0.311068836925433,0.945041568321835,0,29.4220513935918,25.8416192913388,1.22490799214954,0.575072826109418,0.919218786610021,75.9799578895782,46.4781910630083,44.8531077108231,3.29715719325485,2.10421580285542,3.12548022334056,48.5778418262403,42.207195752376,41.2555268997387,35.6500588423138,25.0574158206421,15.6575534493252,0.302904773332736,0.151143120213571,0.579728977403356,0,0,0,0,0,0.983110940922263,0,0,0,8.16891834704747,0,0,0,0,0,0,1.37020655662872,0,0,0.173485326766136,0,0,0.301445281105245,0.117588707135705,4.02133092254962,0,0,0,0.161766849947409,0,0,0,9.07620470735796,5.44561437714983,0,0.11981512450592,0,0,70.102019241457,64.5075849974263,4.52355667606312,50.7567014961447,47.8187905207718,51.94701113989,43.1561759760235,4.48093200941392,0.995255764880744,3.0326731012041,0,0.780722657776222,0.459804208866946,0.180062129805349,0.452114453507145,0.95251098811859,0.768682321709099,0.843315521037559,0.517406741478031,1.07783996466421,3.78212160335639,2.81521798662318,1.53437012699302,2.78047249225598,0.696504333044333,0.823128545631774,0.796137067273973,0,0,0,0.621377317606506,0.703578179943289,0.36012412292203,1.18372367792605,0.393528463494808,0.154267112887378,0,0.268273401399619,0,0,0,0,0,0,0,50.0490077582623,2.6755199218614,0,0,0,0.464473343720877,0.257734922644187,0.80673409849337,0.22237804384487,0.380451252225118,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,2.84501851429623,8.3401414205102,18.0332377076929,25.252764652819,28.511015613641,26.5814757384307,31.1756128022588,12.5468625782662,10.9899109488962,4.68909222902842,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0.167506257441816,0,0.390267295715598,0,0,0,0,0.172684981865896,0,0,0,0,0,65.1835395350435,47.9395798162111,0,0,0.631016438832513,0,0.646270193198397,0.477937595905104,0,0,0.809621403349789,0.584511715822624,1.18586333383957,38.8798792870387,0.283880170416537,0.35613120733451,0.325773918707152,0.329940245945071,0,0.485561272309963,0,0.188605079755898,0,0,0,0,0,0,0,0,4.08527526904546,0.18006109403131,0.129358683782755,1.07168517515796,3.54680467284547,2.14042581122485,3.78462747384878,3.95804433848979,0,0,0.220528398054962,1.48397627647332,1.45317984026315,0.301564624640779,0.238744688006273,0,0.291480836629851,66.0114075157414,0,0.619160603889667,0.370389054739423,0,0,0,0.339956859987711,0.139951452323658,0.414599921413271,0,0.632671987162271,0.813277868507395,0.324016022465404,0.418176592028937,0.218362563746178,0.269728692769641,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0.516639293910924,0.168956125490778,0,1.8228613878153,0.209718688851422,0,0,0.316011120628178,0,0.821687657318618,0.51968329191118,0.179026695667481,0.596044064343795,0.360586348559907,0.147689527174577,0.403865799792591,0.381034033274999,0.403304740547362,0.292373642219257,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,47.4391547798336,43.2705722316746,59.5811333976973,39.8699383037355,58.2320141805046,46.0790277407717,44.5514850152992,39.1779446805072,44.407956080452,47.1161883694156,0.415149390336707,2.39414924040619,2.04880326904961,0.729320151204882,1.04806581313991,1.2869045591501,2.889207461421,1.44224540067226,5.13470735346904,4.29585259998456,3.54871019846336,1.69763707247469,2.24739617927718,2.43295579138503,3.15895079255873,4.28664322154766,3.59241410429052,2.89363830695558,1.64834360321323,3.23837624295674,3.42869252385415,2.66213709239006,2.62279808942053,2.90692833264657,2.35273451038327,3.72304274723377,4.57319932181931,2.63069711437843,2.30866993537965,3.36685362994643,2.37270036248348,2.36410757701352,2.45538625901814,4.64810523557898,1.15743966588685,1.49886346762768,3.27504251823572,2.14871054048298,1.72159498861959,1.32354851471709,1.62307484934295 | |||
|short_description=p1@Gpc5 | |||
}} |
Revision as of 01:30, 13 September 2013
Short description: | p1@Gpc5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gpc5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 29bp_to_ENSMUST00000022707, NM_175500, uc007uyh.2, uc007uyi.2_5end |
EntrezGene: | Gpc5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.51e-09 | 23 |
neuroblast (sensu Vertebrata) | 8.51e-09 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.