FFCP PHASE1:Mm9::chr14:70575204..70575250,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=213019|HGNC=|MCL_coexpression_id=36|UniProt=E9Q996,Q3UUU5|association_with_transcript=0bp_to_ENSMUST00000135944,ENSMUST00000138792,ENSMUST00000143393,uc007unj.1_5end|description=CAGE_peak_2_at_Pdlim2_5end|id=chr14:70575204..70575250,-|ontology_enrichment_celltype=CL:0000838!7.42e-07!12;CL:0002031!8.05e-07!25|ontology_enrichment_celltype_v019_2=CL:0002031,3.16e-08,25;CL:0000838,7.16e-08,12;CL:0000738,9.87e-08,17;CL:0002087,9.87e-08,17;CL:0000084,2.32e-07,11;CL:0000827,2.32e-07,11;CL:0000988,2.44e-07,32;CL:0002032,2.44e-07,32;CL:0000037,2.44e-07,32;CL:0000837,2.44e-07,32;CL:0000542,6.96e-07,13;CL:0000051,6.96e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.11e-16!48;UBERON:0002390!1.30e-14!45;UBERON:0003061!1.30e-14!45;UBERON:0001004!2.20e-12!42;UBERON:0000065!2.78e-12!41;UBERON:0004177!1.10e-10!29;UBERON:0002405!1.91e-10!70;UBERON:0000072!1.35e-09!27;UBERON:0006562!2.81e-08!24;UBERON:0001557!2.81e-08!24;UBERON:0001042!2.81e-08!24;UBERON:0008814!2.81e-08!24;UBERON:0009145!2.81e-08!24;UBERON:0000077!3.66e-08!97;UBERON:0003408!4.24e-08!24;UBERON:0004119!4.42e-08!130;UBERON:0000925!4.42e-08!130;UBERON:0006595!4.42e-08!130;UBERON:0002370!5.04e-08!23;UBERON:0000974!5.04e-08!23;UBERON:0004807!5.04e-08!23;UBERON:0005058!5.04e-08!23;UBERON:0003351!5.04e-08!23;UBERON:0009113!5.04e-08!23;UBERON:0003295!5.04e-08!23;UBERON:0009722!5.04e-08!23;UBERON:0005562!5.04e-08!23;UBERON:0007690!5.04e-08!23;UBERON:0001007!1.15e-07!128;UBERON:0001555!1.15e-07!128;UBERON:0007026!1.15e-07!128;UBERON:0001041!1.50e-07!92;UBERON:0003104!2.58e-07!131;UBERON:0009142!2.58e-07!131;UBERON:0000063!3.34e-07!35;UBERON:0004921!3.63e-07!126;UBERON:0004185!3.63e-07!126;UBERON:0003081!6.40e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.99e-19,48;UBERON:0002405,1.99e-19,48;UBERON:0002390,6.53e-18,45;UBERON:0003061,6.53e-18,45;UBERON:0001004,2.88e-15,42;UBERON:0000065,3.75e-15,41;UBERON:0004177,1.85e-13,29;UBERON:0005057,1.85e-13,29;UBERON:0000072,3.89e-12,27;UBERON:0000077,5.03e-12,35;UBERON:0001041,7.35e-11,80;UBERON:0006562,1.54e-10,24;UBERON:0001557,1.54e-10,24;UBERON:0001042,1.54e-10,24;UBERON:0008814,1.54e-10,24;UBERON:0009145,1.54e-10,24;UBERON:0003408,2.58e-10,24;UBERON:0002370,3.06e-10,23;UBERON:0000974,3.06e-10,23;UBERON:0004807,3.06e-10,23;UBERON:0005058,3.06e-10,23;UBERON:0003351,3.06e-10,23;UBERON:0009113,3.06e-10,23;UBERON:0003295,3.06e-10,23;UBERON:0009722,3.06e-10,23;UBERON:0005562,3.06e-10,23;UBERON:0007690,3.06e-10,23;UBERON:0004119,4.67e-10,118;UBERON:0000925,4.67e-10,118;UBERON:0006595,4.67e-10,118;UBERON:0001007,1.52e-09,116;UBERON:0001555,1.52e-09,116;UBERON:0007026,1.52e-09,116;UBERON:0004921,6.37e-09,114;UBERON:0003081,7.95e-08,87|phase1_expression=0.160148847104794,10.8182376368202,12.739978702907,0,0,3.02182689441402,4.43864017131499,44.9349165576685,3.66050677594334,3.04283884218592,3.93801326918661,3.5099749957948,42.2865802930078,49.2176865618955,8.99396356902289,4.45445588257617,0.699561878128147,25.7101664766964,25.5032846506674,23.3414308488917,2.8064285749853,19.9574811913779,9.92559198727954,5.43974237497583,4.35877634027623,6.89078356938024,4.73838195774982,9.26526300549323,0.760093677825496,2.01624103807945,6.20845429834853,0,0,0,0,0.332469290716985,0,71.5689088560112,45.3174499823804,51.828850653406,72.3524730278148,76.5010943153459,69.427980483455,0.125896817975577,0.608261587317087,0,1.56478268869608,4.79655344036982,5.27246838562732,3.88859798148567,1.25987779462826,0,9.89917375740644,33.3666585325218,42.6839124910929,1.54355661621568,1.43266719969378,3.6097046459421,0,0,0,0.338844532069132,0,9.44894703145469,13.8441290759376,9.2362414942993,5.39280198933128,2.68952813725088,0,0,0.210324961351382,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0.294628585473668,0,0.186399445825301,0.454357159999104,0,0,0,0,0,0,0,2.24711072210803,0.340860645156116,0.259786004602869,0,0,0,0,0,8.65964164044856,9.88103475352884,12.6381111253696,3.76806803072898,18.6435276225964,1.63286352971307,0,0.304465478312141,0.230615497256059,0.753613202763113,0.587943535678524,0.376999773989026,5.6854842578906,2.02439099687876,6.19227386364912,0.485300549842228,3.3126227769059,2.90925151881133,0,0.292780797011547,0,4.34276993854605,2.75574786363617,0.599902730993408,2.03312363316904,0,0,0,0.173824320192276,0,0,0.162241263067758,0.203678727700633,4.22983700074316,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0.12811372028485,0.187403449119458,0,0,0,0.175951124163949,0.219195732427575,0.278047249225598,1.39300866608867,1.85203922767149,0,0,2.31613116403244,3.12579849335152,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0.467061369468678,0.329119699826961,0.32833492815819,0.324275238183423,0.292399974850665,0.658650345873152,0,0.210289948564127,0.205809224758569,5.28670052774077,1.58670339998127,0,0.232236671860439,0.257734922644187,0.403367049246685,0.444756087689741,0.1902256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| ||
|EntrezGene=213019 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=E9Q996,Q3UUU5 | |||
|association_with_transcript=0bp_to_ENSMUST00000135944,ENSMUST00000138792,ENSMUST00000143393,uc007unj.1_5end | |||
|description=CAGE_peak_2_at_Pdlim2_5end | |||
|id=chr14:70575204..70575250,- | |||
|ontology_enrichment_celltype=CL:0000838!7.42e-07!12;CL:0002031!8.05e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,3.16e-08,25;CL:0000838,7.16e-08,12;CL:0000738,9.87e-08,17;CL:0002087,9.87e-08,17;CL:0000084,2.32e-07,11;CL:0000827,2.32e-07,11;CL:0000988,2.44e-07,32;CL:0002032,2.44e-07,32;CL:0000037,2.44e-07,32;CL:0000837,2.44e-07,32;CL:0000542,6.96e-07,13;CL:0000051,6.96e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.11e-16!48;UBERON:0002390!1.30e-14!45;UBERON:0003061!1.30e-14!45;UBERON:0001004!2.20e-12!42;UBERON:0000065!2.78e-12!41;UBERON:0004177!1.10e-10!29;UBERON:0002405!1.91e-10!70;UBERON:0000072!1.35e-09!27;UBERON:0006562!2.81e-08!24;UBERON:0001557!2.81e-08!24;UBERON:0001042!2.81e-08!24;UBERON:0008814!2.81e-08!24;UBERON:0009145!2.81e-08!24;UBERON:0000077!3.66e-08!97;UBERON:0003408!4.24e-08!24;UBERON:0004119!4.42e-08!130;UBERON:0000925!4.42e-08!130;UBERON:0006595!4.42e-08!130;UBERON:0002370!5.04e-08!23;UBERON:0000974!5.04e-08!23;UBERON:0004807!5.04e-08!23;UBERON:0005058!5.04e-08!23;UBERON:0003351!5.04e-08!23;UBERON:0009113!5.04e-08!23;UBERON:0003295!5.04e-08!23;UBERON:0009722!5.04e-08!23;UBERON:0005562!5.04e-08!23;UBERON:0007690!5.04e-08!23;UBERON:0001007!1.15e-07!128;UBERON:0001555!1.15e-07!128;UBERON:0007026!1.15e-07!128;UBERON:0001041!1.50e-07!92;UBERON:0003104!2.58e-07!131;UBERON:0009142!2.58e-07!131;UBERON:0000063!3.34e-07!35;UBERON:0004921!3.63e-07!126;UBERON:0004185!3.63e-07!126;UBERON:0003081!6.40e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.99e-19,48;UBERON:0002405,1.99e-19,48;UBERON:0002390,6.53e-18,45;UBERON:0003061,6.53e-18,45;UBERON:0001004,2.88e-15,42;UBERON:0000065,3.75e-15,41;UBERON:0004177,1.85e-13,29;UBERON:0005057,1.85e-13,29;UBERON:0000072,3.89e-12,27;UBERON:0000077,5.03e-12,35;UBERON:0001041,7.35e-11,80;UBERON:0006562,1.54e-10,24;UBERON:0001557,1.54e-10,24;UBERON:0001042,1.54e-10,24;UBERON:0008814,1.54e-10,24;UBERON:0009145,1.54e-10,24;UBERON:0003408,2.58e-10,24;UBERON:0002370,3.06e-10,23;UBERON:0000974,3.06e-10,23;UBERON:0004807,3.06e-10,23;UBERON:0005058,3.06e-10,23;UBERON:0003351,3.06e-10,23;UBERON:0009113,3.06e-10,23;UBERON:0003295,3.06e-10,23;UBERON:0009722,3.06e-10,23;UBERON:0005562,3.06e-10,23;UBERON:0007690,3.06e-10,23;UBERON:0004119,4.67e-10,118;UBERON:0000925,4.67e-10,118;UBERON:0006595,4.67e-10,118;UBERON:0001007,1.52e-09,116;UBERON:0001555,1.52e-09,116;UBERON:0007026,1.52e-09,116;UBERON:0004921,6.37e-09,114;UBERON:0003081,7.95e-08,87 | |||
|phase1_expression=0.160148847104794,10.8182376368202,12.739978702907,0,0,3.02182689441402,4.43864017131499,44.9349165576685,3.66050677594334,3.04283884218592,3.93801326918661,3.5099749957948,42.2865802930078,49.2176865618955,8.99396356902289,4.45445588257617,0.699561878128147,25.7101664766964,25.5032846506674,23.3414308488917,2.8064285749853,19.9574811913779,9.92559198727954,5.43974237497583,4.35877634027623,6.89078356938024,4.73838195774982,9.26526300549323,0.760093677825496,2.01624103807945,6.20845429834853,0,0,0,0,0.332469290716985,0,71.5689088560112,45.3174499823804,51.828850653406,72.3524730278148,76.5010943153459,69.427980483455,0.125896817975577,0.608261587317087,0,1.56478268869608,4.79655344036982,5.27246838562732,3.88859798148567,1.25987779462826,0,9.89917375740644,33.3666585325218,42.6839124910929,1.54355661621568,1.43266719969378,3.6097046459421,0,0,0,0.338844532069132,0,9.44894703145469,13.8441290759376,9.2362414942993,5.39280198933128,2.68952813725088,0,0,0.210324961351382,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0,0.294628585473668,0,0.186399445825301,0.454357159999104,0,0,0,0,0,0,0,2.24711072210803,0.340860645156116,0.259786004602869,0,0,0,0,0,8.65964164044856,9.88103475352884,12.6381111253696,3.76806803072898,18.6435276225964,1.63286352971307,0,0.304465478312141,0.230615497256059,0.753613202763113,0.587943535678524,0.376999773989026,5.6854842578906,2.02439099687876,6.19227386364912,0.485300549842228,3.3126227769059,2.90925151881133,0,0.292780797011547,0,4.34276993854605,2.75574786363617,0.599902730993408,2.03312363316904,0,0,0,0.173824320192276,0,0,0.162241263067758,0.203678727700633,4.22983700074316,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0.30140963567143,0.204109497453984,0.12811372028485,0.187403449119458,0,0,0,0.175951124163949,0.219195732427575,0.278047249225598,1.39300866608867,1.85203922767149,0,0,2.31613116403244,3.12579849335152,0,0,0,0.23674473558521,0.196764231747404,0,0,0,0.467061369468678,0.329119699826961,0.32833492815819,0.324275238183423,0.292399974850665,0.658650345873152,0,0.210289948564127,0.205809224758569,5.28670052774077,1.58670339998127,0,0.232236671860439,0.257734922644187,0.403367049246685,0.444756087689741,0.190225626112559,1.89811624617805,0.494096864172033,1.25667604400135,1.39269530428806,1.16978452271472,0,0.648414149624083,1.39398891278057,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.210407459670956,2.02356918797623,2.06654207171443,1.56998727841375,1.97435462274881,0.296452627087149,0.333690211432188,0.589676985339609,1.34917267430912,0.405720242777006,0.72353147925725,3.05551022137704,3.16465751195892,2.7562988551756,2.19649130550465,1.43768206527355,3.34926852901653,0.624075346229121,0,0.358794827043824,0.964887042726734,17.5515530658274,0,0.162964976442026,0.509235257325564,1.40814148973101,6.70025029767263,14.7587057349329,10.9274842800367,8.35466263762812,8.19419351700467,7.49437412690189,11.1427054006702,10.3610989119537,11.1379775107764,1.50791283939272,4.35124547054968,1.47529281905711,0,0.160550589987792,0.117211686592203,0.163934945376675,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0.709700426041343,0.178065603667255,0.162886959353576,1.31976098378028,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0.590603785761546,0.614870295887855,0,0,0.356497378384721,1.8962205476149,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0.329098041204242,0.608929898229199,3.28540391289194,2.96564899209348,0.882113592219848,2.14352128823924,1.61464426695906,1.26657142349127,1.3130957840345,2.29797259643086,3.49777003955821,0.18542530201051,15.7201210334024,6.81076664278634,8.33375373163703,6.96963290917357,11.7557035840082,13.2691340459783,10.8786195196067,12.8755336137765,10.7795979567451,2.86401185404534,0,0.203319467126849,0.648032044930808,2.29997125615916,2.18362563746178,1.48350781023303,1.65306911450672,1.83229159388821,0.90730481304255,1.86401793926078,0,0.897099276263873,0.165458490457098,0.194451188344048,0.258319646955462,0.506868376472335,0,0.5208175393758,0.104859344425711,0,0.288030006257865,51.8258237830212,6.28448167399509,6.47079030138412,12.6023198288461,14.501162349066,23.0470371546267,26.3228034448732,29.68559496209,28.7754382352221,28.1965184623499,32.86933635461,42.101804479573,33.0968735242733,34.8293168501075,3.62768613784338,2.44184548711471,3.13998498133165,4.86865387455827,0.386379188064381,1.87682475451182,1.09890974560359,6.00231461421384,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.729320151204882,0.838452650511929,0.367687016900028,1.77797382241292,1.03017528619447,0.64183841918363,0.505394423527595,0.760437899670719,0.188626341386076,1.49826411951812,1.15245274328765,1.49332219284595,0.952587382566147,1.15884325944855,0.77163688185482,0.824171801606613,1.17759136107518,0,1.77475806159337,1.1921809497366,1.0174249164263,0.658765662907314,1.18460451048347,0.73171189149109,0.789209134313529,1.08643291076689,0.561142271657738,1.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| |||
|short_description=p2@Pdlim2 | |||
}} |
Revision as of 02:58, 13 September 2013
Short description: | p2@Pdlim2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pdlim2_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000135944, ENSMUST00000138792, ENSMUST00000143393, uc007unj.1_5end |
EntrezGene: | Pdlim2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 3.16e-08 | 25 |
lymphoid lineage restricted progenitor cell | 7.16e-08 | 12 |
leukocyte | 9.87e-08 | 17 |
nongranular leukocyte | 9.87e-08 | 17 |
T cell | 2.32e-07 | 11 |
pro-T cell | 2.32e-07 | 11 |
hematopoietic cell | 2.44e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.44e-07 | 32 |
hematopoietic stem cell | 2.44e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.44e-07 | 32 |
lymphocyte | 6.96e-07 | 13 |
common lymphoid progenitor | 6.96e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.