FFCP PHASE1:Mm9::chr15:66644221..66644242,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20491|HGNC=|MCL_coexpression_id=3|UniProt=Q60898,Q4FJX0|association_with_transcript=-66bp_to_ENSMUST00000100572,NM_009192,uc007was.1,uc011ztn.1_5end|description=CAGE_peak_5_at_Sla_5end|id=chr15:66644221..66644242,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,6.67e-08,32;CL:0002032,6.67e-08,32;CL:0000037,6.67e-08,32;CL:0000837,6.67e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!4.68e-13!70;UBERON:0002193!9.82e-12!48;UBERON:0002390!8.51e-11!45;UBERON:0003061!8.51e-11!45;UBERON:0005057!1.74e-09!51;UBERON:0004177!1.43e-08!29;UBERON:0001041!3.11e-08!92;UBERON:0000077!7.96e-08!97;UBERON:0003104!7.06e-07!131;UBERON:0009142!7.06e-07!131|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.98e-15,48;UBERON:0002405,5.98e-15,48;UBERON:0002390,9.11e-14,45;UBERON:0003061,9.11e-14,45;UBERON:0001041,6.09e-12,80;UBERON:0004177,6.93e-11,29;UBERON:0005057,6.93e-11,29;UBERON:0001007,9.86e-10,116;UBERON:0001555,9.86e-10,116;UBERON:0007026,9.86e-10,116;UBERON:0004921,2.65e-09,114;UBERON:0004119,3.37e-09,118;UBERON:0000925,3.37e-09,118;UBERON:0006595,3.37e-09,118;UBERON:0005911,2.40e-08,69;UBERON:0001004,2.72e-08,42;UBERON:0000065,3.59e-08,41;UBERON:0000077,4.10e-08,35;UBERON:0003408,2.81e-07,24;UBERON:0002370,3.44e-07,23;UBERON:0000974,3.44e-07,23;UBERON:0004807,3.44e-07,23;UBERON:0005058,3.44e-07,23;UBERON:0003351,3.44e-07,23;UBERON:0009113,3.44e-07,23;UBERON:0003295,3.44e-07,23;UBERON:0009722,3.44e-07,23;UBERON:0005562,3.44e-07,23;UBERON:0007690,3.44e-07,23|phase1_expression=0.160148847104794,0,0,0,0,0,0,13.2997023144824,1.267098499365,1.40438715793196,0.856089841127525,0.319088635981346,6.67682846731702,4.80812213304486,5.99597571268193,10.7311891716608,5.59649502502517,22.3978137404349,24.4063691818215,28.00971701867,1.87095238332354,7.94327609607082,4.70159620450084,1.59992422793407,1.83527424853736,0,0.430761996159075,0,0.380046838912748,0.252030129759931,1.33038306393183,0,0,0,0,0,0,136.859843250969,110.94961892238,105.751796282707,121.175686534389,126.363414717312,117.007995080508,0,0,0,0,0,0,0,0,0,23.6573474541408,12.3311564141929,4.03312558970957,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0.899899717281399,0,0,0,0.768436610643109,0.207379224616955,0.405017814995072,0.420649922702764,0,1.10434270475807,0,0.383381884072945,0,1.10115880999389,0.383062014255563,0.614426133024974,0.131886287730194,0.182975287204819,0,1.11673199600552,0,0.61119299110724,0,0.569486723196412,0.559198337475902,0.227178579999552,0,0,2.58127163094416,0,0,0,0,3.7919993435573,0,0,0,0,0,0,0,0,0,0,2.96878087269556,31.5904218049549,3.41416919849097,0.693941307064543,0.913396434936424,1.61430848079241,0.753613202763113,0.823120949949934,0.753999547978053,0,3.18118585223806,22.9998743506967,2.58826959915855,12.8088080707028,6.30337829075789,1.86391761218122,0,0,1.78819938646014,5.51149572727233,3.59941638596045,5.20987930999565,0.449371918214468,2.74500361691176,0,0.173824320192276,0,0.62336413367868,0.324482526135515,0.712875546952214,12.4406970610093,0.252722758433675,0.420883711772948,0.390361328888111,0.459804208866946,0.360124259610698,0.753524089178575,0.272145996605311,0.384341160854549,0.0937017245597288,0.258703370739016,0.431135985865684,0.189106080167819,0,0.876782929710299,0,2.089512999133,1.23469281844766,0.398068533636986,8.42655824775882,9.00717674901503,7.95657798307659,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.787056926989615,0.308534225774757,0,0.268273401399619,0.467061369468678,0,0.32833492815819,0.729619285912702,1.02339991197733,3.29325172936576,0.805238512562231,1.05144974282064,0.102904612379284,0.660837565967596,1.05780226665418,0,0.464473343720877,1.03093969057675,1.4117846723634,1.33426826306922,0.570676878337677,4.2707615539006,0.164698954724011,1.75934646160189,0.596869416123452,3.50935356814416,2.69645822596266,2.16138049874694,1.99141273254367,0.379335801906163,0.456994050438915,0,0.610953983535943,0.581857461502877,0.420814919341911,0.252946148497029,0.295220295959204,0.627994911365499,0.123397163921801,2.07516838961004,5.00535317148282,2.94838492669805,4.04751802292737,5.88294352026658,6.51178331331525,8.65727896056827,9.49397253587675,7.62035565842666,4.3929826110093,2.87536413054709,2.60498663367952,3.12037673114561,1.01031551178845,0.896987067609561,0.964887042726734,9.97667226899665,0,1.14075483509418,0.848725428875941,2.34690248288502,1.50755631697634,5.47500374037832,2.34160377429359,3.4679731703362,1.99318220683897,2.07291199254733,7.53771247692395,8.28887912956299,7.5217510462386,1.50791283939272,9.24639662491806,0.983528546038072,1.93155722413313,0.481651769963376,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.642642632843614,1.13552068166615,0.178065603667255,0.81443479676788,4.45419332025846,0,0.485561272309963,0,0.943025398779491,1.18120757152309,1.22974059177571,1.03371317267288,0.363533729477506,0.356497378384721,0.948110273807448,1.05418608574999,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| ||
|EntrezGene=20491 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=Q60898,Q4FJX0 | |||
|association_with_transcript=-66bp_to_ENSMUST00000100572,NM_009192,uc007was.1,uc011ztn.1_5end | |||
|description=CAGE_peak_5_at_Sla_5end | |||
|id=chr15:66644221..66644242,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.67e-08,32;CL:0002032,6.67e-08,32;CL:0000037,6.67e-08,32;CL:0000837,6.67e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!4.68e-13!70;UBERON:0002193!9.82e-12!48;UBERON:0002390!8.51e-11!45;UBERON:0003061!8.51e-11!45;UBERON:0005057!1.74e-09!51;UBERON:0004177!1.43e-08!29;UBERON:0001041!3.11e-08!92;UBERON:0000077!7.96e-08!97;UBERON:0003104!7.06e-07!131;UBERON:0009142!7.06e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.98e-15,48;UBERON:0002405,5.98e-15,48;UBERON:0002390,9.11e-14,45;UBERON:0003061,9.11e-14,45;UBERON:0001041,6.09e-12,80;UBERON:0004177,6.93e-11,29;UBERON:0005057,6.93e-11,29;UBERON:0001007,9.86e-10,116;UBERON:0001555,9.86e-10,116;UBERON:0007026,9.86e-10,116;UBERON:0004921,2.65e-09,114;UBERON:0004119,3.37e-09,118;UBERON:0000925,3.37e-09,118;UBERON:0006595,3.37e-09,118;UBERON:0005911,2.40e-08,69;UBERON:0001004,2.72e-08,42;UBERON:0000065,3.59e-08,41;UBERON:0000077,4.10e-08,35;UBERON:0003408,2.81e-07,24;UBERON:0002370,3.44e-07,23;UBERON:0000974,3.44e-07,23;UBERON:0004807,3.44e-07,23;UBERON:0005058,3.44e-07,23;UBERON:0003351,3.44e-07,23;UBERON:0009113,3.44e-07,23;UBERON:0003295,3.44e-07,23;UBERON:0009722,3.44e-07,23;UBERON:0005562,3.44e-07,23;UBERON:0007690,3.44e-07,23 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,13.2997023144824,1.267098499365,1.40438715793196,0.856089841127525,0.319088635981346,6.67682846731702,4.80812213304486,5.99597571268193,10.7311891716608,5.59649502502517,22.3978137404349,24.4063691818215,28.00971701867,1.87095238332354,7.94327609607082,4.70159620450084,1.59992422793407,1.83527424853736,0,0.430761996159075,0,0.380046838912748,0.252030129759931,1.33038306393183,0,0,0,0,0,0,136.859843250969,110.94961892238,105.751796282707,121.175686534389,126.363414717312,117.007995080508,0,0,0,0,0,0,0,0,0,23.6573474541408,12.3311564141929,4.03312558970957,0,0.286533439938757,1.03134418455488,0,0,0,0,0,0.899899717281399,0,0,0,0.768436610643109,0.207379224616955,0.405017814995072,0.420649922702764,0,1.10434270475807,0,0.383381884072945,0,1.10115880999389,0.383062014255563,0.614426133024974,0.131886287730194,0.182975287204819,0,1.11673199600552,0,0.61119299110724,0,0.569486723196412,0.559198337475902,0.227178579999552,0,0,2.58127163094416,0,0,0,0,3.7919993435573,0,0,0,0,0,0,0,0,0,0,2.96878087269556,31.5904218049549,3.41416919849097,0.693941307064543,0.913396434936424,1.61430848079241,0.753613202763113,0.823120949949934,0.753999547978053,0,3.18118585223806,22.9998743506967,2.58826959915855,12.8088080707028,6.30337829075789,1.86391761218122,0,0,1.78819938646014,5.51149572727233,3.59941638596045,5.20987930999565,0.449371918214468,2.74500361691176,0,0.173824320192276,0,0.62336413367868,0.324482526135515,0.712875546952214,12.4406970610093,0.252722758433675,0.420883711772948,0.390361328888111,0.459804208866946,0.360124259610698,0.753524089178575,0.272145996605311,0.384341160854549,0.0937017245597288,0.258703370739016,0.431135985865684,0.189106080167819,0,0.876782929710299,0,2.089512999133,1.23469281844766,0.398068533636986,8.42655824775882,9.00717674901503,7.95657798307659,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0.787056926989615,0.308534225774757,0,0.268273401399619,0.467061369468678,0,0.32833492815819,0.729619285912702,1.02339991197733,3.29325172936576,0.805238512562231,1.05144974282064,0.102904612379284,0.660837565967596,1.05780226665418,0,0.464473343720877,1.03093969057675,1.4117846723634,1.33426826306922,0.570676878337677,4.2707615539006,0.164698954724011,1.75934646160189,0.596869416123452,3.50935356814416,2.69645822596266,2.16138049874694,1.99141273254367,0.379335801906163,0.456994050438915,0,0.610953983535943,0.581857461502877,0.420814919341911,0.252946148497029,0.295220295959204,0.627994911365499,0.123397163921801,2.07516838961004,5.00535317148282,2.94838492669805,4.04751802292737,5.88294352026658,6.51178331331525,8.65727896056827,9.49397253587675,7.62035565842666,4.3929826110093,2.87536413054709,2.60498663367952,3.12037673114561,1.01031551178845,0.896987067609561,0.964887042726734,9.97667226899665,0,1.14075483509418,0.848725428875941,2.34690248288502,1.50755631697634,5.47500374037832,2.34160377429359,3.4679731703362,1.99318220683897,2.07291199254733,7.53771247692395,8.28887912956299,7.5217510462386,1.50791283939272,9.24639662491806,0.983528546038072,1.93155722413313,0.481651769963376,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0.642642632843614,1.13552068166615,0.178065603667255,0.81443479676788,4.45419332025846,0,0.485561272309963,0,0.943025398779491,1.18120757152309,1.22974059177571,1.03371317267288,0.363533729477506,0.356497378384721,0.948110273807448,1.05418608574999,1.03135543248187,0.340439605753788,1.08036656418786,0.776152102696527,0.214337035031592,0.354680467284547,0.356737635204141,0.493647061806363,0.608929898229199,0.704015124191131,0,0.441056796109924,0.98931751764888,0.807322133479528,0.663442174209714,0,0.164140899745061,1.7488850197791,0.741701208042039,18.2831842453702,9.08102219038179,16.6675074632741,12.4323181623096,11.4823151285661,9.83746144788047,2.37969801991397,4.19854356970974,3.59319931891502,0,0.949007980743406,1.01659733563424,1.40406943068342,0.418176592028937,1.09181281873089,0,0.991841468704031,1.04702376793612,0.388844919875379,1.24267862617385,0,0.299033092087958,0.66183396182839,0.777804753376191,0.387479470433193,0.337912250981556,0.704143431874524,0.13020438484395,0.104859344425711,0,0,15.8005560314089,2.02725215290164,2.97861775777999,6.75588279484534,11.9947886097213,19.6694541233452,10.0964177596774,16.0981584620289,13.2266049432073,10.745159738355,16.7371467327155,17.5424185331554,16.067377553935,16.4796432076012,0.906921534460845,0,0,0,0.965947970160952,1.50145980360946,2.38097111547445,1.92931541171159,0,0.564751842617067,0.920650473014354,0,1.03111909406213,0.685082519770642,0.755393897389701,1.35004500046361,0.900642406448441,0.906284817968409,0,0.415149390336707,0.399024873401031,1.02440163452481,1.21553358534147,0.628839487883947,0.919217542250071,0.888986911206461,1.44224540067226,0.962757628775446,0.758091635291392,0.760437899670719,1.69763707247469,0.936415074698824,1.47257850531199,0.804096565378586,0.476293691283074,0.695305955669133,0.578727661391115,1.23625770240992,0.735994600671987,0,0.70990322463735,1.66905332963125,1.30811774969096,0.846984423737976,1.52306294205018,0.914639864363863,1.57841826862706,0.814824683075171,2.24456908663095,1.89816028998679,1.28055827088233,1.22769312950907,1.23949472948773,1.73615949883027,0,4.21076895201735,0.859484216193193,1.72159498861959,3.75005412503176,2.55054619182464 | |||
|short_description=p5@Sla | |||
}} |
Revision as of 10:45, 13 September 2013
Short description: | p5@Sla |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Sla_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -66bp_to_ENSMUST00000100572, NM_009192, uc007was.1, uc011ztn.1_5end |
EntrezGene: | Sla |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.67e-08 | 32 |
hematopoietic oligopotent progenitor cell | 6.67e-08 | 32 |
hematopoietic stem cell | 6.67e-08 | 32 |
hematopoietic multipotent progenitor cell | 6.67e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.98e-15 | 48 |
immune system | 5.98e-15 | 48 |
hematopoietic system | 9.11e-14 | 45 |
blood island | 9.11e-14 | 45 |
foregut | 6.09e-12 | 80 |
hemopoietic organ | 6.93e-11 | 29 |
immune organ | 6.93e-11 | 29 |
digestive system | 9.86e-10 | 116 |
digestive tract | 9.86e-10 | 116 |
primitive gut | 9.86e-10 | 116 |
subdivision of digestive tract | 2.65e-09 | 114 |
endoderm-derived structure | 3.37e-09 | 118 |
endoderm | 3.37e-09 | 118 |
presumptive endoderm | 3.37e-09 | 118 |
endo-epithelium | 2.40e-08 | 69 |
respiratory system | 2.72e-08 | 42 |
respiratory tract | 3.59e-08 | 41 |
mixed endoderm/mesoderm-derived structure | 4.10e-08 | 35 |
gland of gut | 2.81e-07 | 24 |
thymus | 3.44e-07 | 23 |
neck | 3.44e-07 | 23 |
respiratory system epithelium | 3.44e-07 | 23 |
hemolymphoid system gland | 3.44e-07 | 23 |
pharyngeal epithelium | 3.44e-07 | 23 |
thymic region | 3.44e-07 | 23 |
pharyngeal gland | 3.44e-07 | 23 |
entire pharyngeal arch endoderm | 3.44e-07 | 23 |
thymus primordium | 3.44e-07 | 23 |
early pharyngeal endoderm | 3.44e-07 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.