FFCP PHASE1:Mm9::chr15:71558654..71558674,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=70363|HGNC=|MCL_coexpression_id=39|UniProt=Q9DAI6,Q8BLS3|association_with_transcript=-386bp_to_ENSMUST00000022953,NM_177819,uc007wbi.1,uc011ztr.1_5end|description=CAGE_peak_2_at_Fam135b_5end|id=chr15:71558654..71558674,-|ontology_enrichment_celltype=CL:0000117!1.29e-15!23;CL:0000337!1.29e-15!23;CL:0000540!7.66e-13!33;CL:0000047!7.66e-13!33;CL:0000031!7.66e-13!33;CL:0000404!7.66e-13!33;CL:0000393!1.49e-09!39;CL:0000211!1.49e-09!39;CL:0002319!6.38e-08!43;CL:0000221!1.45e-07!44;CL:0000133!1.45e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,6.93e-13,23;CL:0000337,6.93e-13,23;CL:0000540,3.65e-08,33;CL:0000047,3.65e-08,33;CL:0000031,3.65e-08,33;CL:0000404,3.65e-08,33;CL:0002614,4.04e-07,3;CL:0002612,5.18e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.53e-28!52;UBERON:0005068!2.53e-28!52;UBERON:0006241!2.53e-28!52;UBERON:0007135!2.53e-28!52;UBERON:0001017!4.44e-27!73;UBERON:0005743!4.44e-27!73;UBERON:0000955!5.37e-26!50;UBERON:0006238!5.37e-26!50;UBERON:0000073!7.87e-26!75;UBERON:0001016!7.87e-26!75;UBERON:0002020!7.98e-26!34;UBERON:0002616!2.88e-25!49;UBERON:0002346!1.42e-23!71;UBERON:0003075!1.42e-23!71;UBERON:0007284!1.42e-23!71;UBERON:0004121!2.23e-23!102;UBERON:0000924!2.23e-23!102;UBERON:0006601!2.23e-23!102;UBERON:0000033!7.41e-22!63;UBERON:0002791!2.60e-21!29;UBERON:0003528!2.60e-21!29;UBERON:0001893!2.60e-21!29;UBERON:0003080!1.96e-20!40;UBERON:0002780!1.51e-19!39;UBERON:0001890!1.51e-19!39;UBERON:0006240!1.51e-19!39;UBERON:0003056!5.93e-18!49;UBERON:0000956!4.21e-15!21;UBERON:0001869!4.21e-15!21;UBERON:0000203!4.21e-15!21;UBERON:0007811!1.02e-13!86;UBERON:0002619!1.21e-12!17;UBERON:0002021!1.44e-11!10;UBERON:0000411!1.44e-11!10;UBERON:0001950!1.44e-11!10;UBERON:0000153!3.19e-11!94;UBERON:0003076!2.46e-08!12;UBERON:0003057!2.46e-08!12;UBERON:0002420!2.26e-07!8;UBERON:0007245!2.26e-07!8;UBERON:0010009!2.26e-07!8;UBERON:0010011!2.26e-07!8;UBERON:0000454!2.26e-07!8;UBERON:0000025!3.60e-07!114;UBERON:0000064!4.25e-07!99;UBERON:0002298!9.70e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.00e-43,54;UBERON:0001049,2.52e-40,52;UBERON:0005068,2.52e-40,52;UBERON:0006241,2.52e-40,52;UBERON:0007135,2.52e-40,52;UBERON:0002346,7.04e-36,64;UBERON:0003075,7.04e-36,64;UBERON:0007284,7.04e-36,64;UBERON:0002020,1.35e-34,34;UBERON:0001017,1.59e-32,73;UBERON:0001016,1.85e-31,75;UBERON:0010371,1.53e-30,73;UBERON:0002616,1.76e-29,46;UBERON:0000955,1.02e-28,47;UBERON:0006238,1.02e-28,47;UBERON:0004121,1.55e-26,95;UBERON:0000924,1.55e-26,95;UBERON:0006601,1.55e-26,95;UBERON:0003528,1.61e-25,29;UBERON:0002791,1.61e-25,29;UBERON:0001893,1.61e-25,29;UBERON:0002021,4.28e-24,10;UBERON:0000411,4.28e-24,10;UBERON:0001950,4.28e-24,10;UBERON:0003080,1.38e-23,40;UBERON:0010314,1.07e-22,92;UBERON:0002619,3.48e-22,17;UBERON:0003056,4.65e-22,49;UBERON:0002780,5.87e-22,39;UBERON:0001890,5.87e-22,39;UBERON:0006240,5.87e-22,39;UBERON:0000956,3.02e-20,21;UBERON:0001869,3.02e-20,21;UBERON:0000203,3.02e-20,21;UBERON:0003076,4.11e-18,12;UBERON:0003057,4.11e-18,12;UBERON:0000025,1.87e-14,114;UBERON:0002240,3.45e-13,6;UBERON:0005174,3.45e-13,6;UBERON:0001137,3.45e-13,6;UBERON:0004111,4.98e-13,122;UBERON:0001948,6.76e-11,5;UBERON:0002315,6.76e-11,5;UBERON:0002950,4.59e-09,4;UBERON:0001891,4.59e-09,4;UBERON:0009616,4.59e-09,4;UBERON:0010286,4.59e-09,4;UBERON:0000483,1.92e-08,174;UBERON:0000119,2.92e-08,176;UBERON:0011216,1.81e-07,194;UBERON:0002038,4.04e-07,3;UBERON:0009663,4.04e-07,3;UBERON:0009661,4.04e-07,3;UBERON:0000125,4.04e-07,3;UBERON:0002308,4.04e-07,3;UBERON:0002257,5.18e-07,3;UBERON:0004733,5.39e-07,6;UBERON:0004732,5.39e-07,6;UBERON:0002028,5.39e-07,6;UBERON:0007277,5.39e-07,6|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.725827286159344,0.405017814995072,0.210324961351382,3.71346279724945,2.87129103237098,0.489963196859816,0.383381884072945,1.83843757322004,1.10115880999389,2.68143409978894,1.68967186581868,0.659431438650969,0.640413505216868,1.04182674111352,2.23346399201105,2.25105044012672,3.36156145108982,4.12480019663135,2.27794689278565,1.1183966749518,0,0,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0,0,0.741584903203122,0.144599356919912,0,0,0,0,0,13.7606974595427,8.79676168616511,0,0,0,0,3.2953940669061,2.74500361691176,0.628271760564322,4.86708096538374,4.60287823194595,1.45451631191692,3.0825839982874,0.305518091550949,0,0,1.68353484709179,0,0,0,0,0,0.12811372028485,0,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04246778825747,2.05809224758569,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,5.61927064957272,5.39173758324135,0,0,0,0.390438744296638,0,0,0,0,0,0.584511715822624,0.790575555893047,0.642642632843614,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0.304464949114599,0.704015124191131,1.90648863777438,0,0.32977250588296,0.161464426695906,0.0603129249281559,0,0.328281799490123,0,8.34413859047294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0.93841237725591,0.183151624267265,0,0,12.4245405375755,9.20650473014354,5.72895513439397,5.67115501734169,6.16574267793578,8.3093328712867,7.42524750254986,6.30449684513909,6.34399372577886,6.73088405277366,0,0,0,0,0,0,0,0.618105171716683,0.64183841918363,0.252697211763798,1.2673964994512,0.188626341386076,0.37456602987953,0.192075457214608,0.34461281373368,0,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.581385666529314,0.376437521661322,0.423073039458382,0,0.526139422875686,0,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.309873682371932,0,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0,0|short_description=p2@Fam135b}} | ||
|EntrezGene=70363 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|UniProt=Q9DAI6,Q8BLS3 | |||
|association_with_transcript=-386bp_to_ENSMUST00000022953,NM_177819,uc007wbi.1,uc011ztr.1_5end | |||
|description=CAGE_peak_2_at_Fam135b_5end | |||
|id=chr15:71558654..71558674,- | |||
|ontology_enrichment_celltype=CL:0000117!1.29e-15!23;CL:0000337!1.29e-15!23;CL:0000540!7.66e-13!33;CL:0000047!7.66e-13!33;CL:0000031!7.66e-13!33;CL:0000404!7.66e-13!33;CL:0000393!1.49e-09!39;CL:0000211!1.49e-09!39;CL:0002319!6.38e-08!43;CL:0000221!1.45e-07!44;CL:0000133!1.45e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.93e-13,23;CL:0000337,6.93e-13,23;CL:0000540,3.65e-08,33;CL:0000047,3.65e-08,33;CL:0000031,3.65e-08,33;CL:0000404,3.65e-08,33;CL:0002614,4.04e-07,3;CL:0002612,5.18e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.53e-28!52;UBERON:0005068!2.53e-28!52;UBERON:0006241!2.53e-28!52;UBERON:0007135!2.53e-28!52;UBERON:0001017!4.44e-27!73;UBERON:0005743!4.44e-27!73;UBERON:0000955!5.37e-26!50;UBERON:0006238!5.37e-26!50;UBERON:0000073!7.87e-26!75;UBERON:0001016!7.87e-26!75;UBERON:0002020!7.98e-26!34;UBERON:0002616!2.88e-25!49;UBERON:0002346!1.42e-23!71;UBERON:0003075!1.42e-23!71;UBERON:0007284!1.42e-23!71;UBERON:0004121!2.23e-23!102;UBERON:0000924!2.23e-23!102;UBERON:0006601!2.23e-23!102;UBERON:0000033!7.41e-22!63;UBERON:0002791!2.60e-21!29;UBERON:0003528!2.60e-21!29;UBERON:0001893!2.60e-21!29;UBERON:0003080!1.96e-20!40;UBERON:0002780!1.51e-19!39;UBERON:0001890!1.51e-19!39;UBERON:0006240!1.51e-19!39;UBERON:0003056!5.93e-18!49;UBERON:0000956!4.21e-15!21;UBERON:0001869!4.21e-15!21;UBERON:0000203!4.21e-15!21;UBERON:0007811!1.02e-13!86;UBERON:0002619!1.21e-12!17;UBERON:0002021!1.44e-11!10;UBERON:0000411!1.44e-11!10;UBERON:0001950!1.44e-11!10;UBERON:0000153!3.19e-11!94;UBERON:0003076!2.46e-08!12;UBERON:0003057!2.46e-08!12;UBERON:0002420!2.26e-07!8;UBERON:0007245!2.26e-07!8;UBERON:0010009!2.26e-07!8;UBERON:0010011!2.26e-07!8;UBERON:0000454!2.26e-07!8;UBERON:0000025!3.60e-07!114;UBERON:0000064!4.25e-07!99;UBERON:0002298!9.70e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.00e-43,54;UBERON:0001049,2.52e-40,52;UBERON:0005068,2.52e-40,52;UBERON:0006241,2.52e-40,52;UBERON:0007135,2.52e-40,52;UBERON:0002346,7.04e-36,64;UBERON:0003075,7.04e-36,64;UBERON:0007284,7.04e-36,64;UBERON:0002020,1.35e-34,34;UBERON:0001017,1.59e-32,73;UBERON:0001016,1.85e-31,75;UBERON:0010371,1.53e-30,73;UBERON:0002616,1.76e-29,46;UBERON:0000955,1.02e-28,47;UBERON:0006238,1.02e-28,47;UBERON:0004121,1.55e-26,95;UBERON:0000924,1.55e-26,95;UBERON:0006601,1.55e-26,95;UBERON:0003528,1.61e-25,29;UBERON:0002791,1.61e-25,29;UBERON:0001893,1.61e-25,29;UBERON:0002021,4.28e-24,10;UBERON:0000411,4.28e-24,10;UBERON:0001950,4.28e-24,10;UBERON:0003080,1.38e-23,40;UBERON:0010314,1.07e-22,92;UBERON:0002619,3.48e-22,17;UBERON:0003056,4.65e-22,49;UBERON:0002780,5.87e-22,39;UBERON:0001890,5.87e-22,39;UBERON:0006240,5.87e-22,39;UBERON:0000956,3.02e-20,21;UBERON:0001869,3.02e-20,21;UBERON:0000203,3.02e-20,21;UBERON:0003076,4.11e-18,12;UBERON:0003057,4.11e-18,12;UBERON:0000025,1.87e-14,114;UBERON:0002240,3.45e-13,6;UBERON:0005174,3.45e-13,6;UBERON:0001137,3.45e-13,6;UBERON:0004111,4.98e-13,122;UBERON:0001948,6.76e-11,5;UBERON:0002315,6.76e-11,5;UBERON:0002950,4.59e-09,4;UBERON:0001891,4.59e-09,4;UBERON:0009616,4.59e-09,4;UBERON:0010286,4.59e-09,4;UBERON:0000483,1.92e-08,174;UBERON:0000119,2.92e-08,176;UBERON:0011216,1.81e-07,194;UBERON:0002038,4.04e-07,3;UBERON:0009663,4.04e-07,3;UBERON:0009661,4.04e-07,3;UBERON:0000125,4.04e-07,3;UBERON:0002308,4.04e-07,3;UBERON:0002257,5.18e-07,3;UBERON:0004733,5.39e-07,6;UBERON:0004732,5.39e-07,6;UBERON:0002028,5.39e-07,6;UBERON:0007277,5.39e-07,6 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.725827286159344,0.405017814995072,0.210324961351382,3.71346279724945,2.87129103237098,0.489963196859816,0.383381884072945,1.83843757322004,1.10115880999389,2.68143409978894,1.68967186581868,0.659431438650969,0.640413505216868,1.04182674111352,2.23346399201105,2.25105044012672,3.36156145108982,4.12480019663135,2.27794689278565,1.1183966749518,0,0,0,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0.304465478312141,0,0.150722640552623,0,0,0.741584903203122,0.144599356919912,0,0,0,0,0,13.7606974595427,8.79676168616511,0,0,0,0,3.2953940669061,2.74500361691176,0.628271760564322,4.86708096538374,4.60287823194595,1.45451631191692,3.0825839982874,0.305518091550949,0,0,1.68353484709179,0,0,0,0,0,0.12811372028485,0,2.32833033665114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.04246778825747,2.05809224758569,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,5.61927064957272,5.39173758324135,0,0,0,0.390438744296638,0,0,0,0,0,0.584511715822624,0.790575555893047,0.642642632843614,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0.329098041204242,0.304464949114599,0.704015124191131,1.90648863777438,0,0.32977250588296,0.161464426695906,0.0603129249281559,0,0.328281799490123,0,8.34413859047294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0.93841237725591,0.183151624267265,0,0,12.4245405375755,9.20650473014354,5.72895513439397,5.67115501734169,6.16574267793578,8.3093328712867,7.42524750254986,6.30449684513909,6.34399372577886,6.73088405277366,0,0,0,0,0,0,0,0.618105171716683,0.64183841918363,0.252697211763798,1.2673964994512,0.188626341386076,0.37456602987953,0.192075457214608,0.34461281373368,0,0.231768651889711,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0,0.581385666529314,0.376437521661322,0.423073039458382,0,0.526139422875686,0,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.309873682371932,0,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p2@Fam135b | |||
}} |
Revision as of 10:47, 13 September 2013
Short description: | p2@Fam135b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fam135b_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | -386bp_to_ENSMUST00000022953, NM_177819, uc007wbi.1, uc011ztr.1_5end |
EntrezGene: | Fam135b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.93e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.93e-13 | 23 |
neuron | 3.65e-08 | 33 |
neuronal stem cell | 3.65e-08 | 33 |
neuroblast | 3.65e-08 | 33 |
electrically signaling cell | 3.65e-08 | 33 |
neuron of the substantia nigra | 4.04e-07 | 3 |
neuron of the ventral spinal cord | 5.18e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.