FFCP PHASE1:Mm9::chr16:72563657..72563666,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=141|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:72563657..72563666,+|id=chr16:72563657..72563666,+|ontology_enrichment_celltype=CL:0000117!2.45e-16!23;CL:0000337!2.45e-16!23;CL:0000540!3.19e-10!33;CL:0000047!3.19e-10!33;CL:0000031!3.19e-10!33;CL:0000404!3.19e-10!33;CL:0000393!4.37e-08!39;CL:0000211!4.37e-08!39;CL:0002613!1.27e-07!3;CL:0002612!4.89e-07!3;CL:0002319!5.28e-07!43;CL:0000221!9.14e-07!44;CL:0000133!9.14e-07!44|ontology_enrichment_celltype_v019_2=CL:0002613,3.65e-65,3;CL:0000117,2.18e-09,23;CL:0000337,2.18e-09,23;CL:0000540,8.60e-07,33;CL:0000047,8.60e-07,33;CL:0000031,8.60e-07,33;CL:0000404,8.60e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!9.14e-12!6;UBERON:0005174!9.14e-12!6;UBERON:0001137!9.14e-12!6;UBERON:0001948!2.62e-10!5;UBERON:0002315!2.62e-10!5;UBERON:0002420!4.28e-09!8;UBERON:0007245!4.28e-09!8;UBERON:0010009!4.28e-09!8;UBERON:0010011!4.28e-09!8;UBERON:0000454!4.28e-09!8;UBERON:0001049!4.31e-09!52;UBERON:0005068!4.31e-09!52;UBERON:0006241!4.31e-09!52;UBERON:0007135!4.31e-09!52;UBERON:0002346!8.96e-09!71;UBERON:0003075!8.96e-09!71;UBERON:0007284!8.96e-09!71;UBERON:0001017!1.62e-07!73;UBERON:0005743!1.62e-07!73;UBERON:0003076!2.27e-07!12;UBERON:0003057!2.27e-07!12;UBERON:0002020!3.09e-07!34;UBERON:0000073!3.54e-07!75;UBERON:0001016!3.54e-07!75;UBERON:0002257!4.89e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.33e-39,5;UBERON:0002435,1.33e-39,5;UBERON:0000204,1.33e-39,5;UBERON:0010082,1.33e-39,5;UBERON:0002420,3.49e-25,8;UBERON:0007245,3.49e-25,8;UBERON:0010009,3.49e-25,8;UBERON:0010011,3.49e-25,8;UBERON:0000454,3.49e-25,8;UBERON:0003528,1.28e-07,29;UBERON:0002791,1.28e-07,29;UBERON:0001893,1.28e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0.191690942036473,0,0,0.127687338085188,0.153606533256243,1.45074916503213,3.38504281328916,1.04182674111352,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.569486723196412,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0.180062129805349,0,0.136072998302656,0,0.281105173679186,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,2.39414924040619,0.682934423016537,0,0,0,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0.561142271657738,0.355905054372522,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr16:72563657..72563666,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=141 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:72563657..72563666,+ | |||
|id=chr16:72563657..72563666,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.45e-16!23;CL:0000337!2.45e-16!23;CL:0000540!3.19e-10!33;CL:0000047!3.19e-10!33;CL:0000031!3.19e-10!33;CL:0000404!3.19e-10!33;CL:0000393!4.37e-08!39;CL:0000211!4.37e-08!39;CL:0002613!1.27e-07!3;CL:0002612!4.89e-07!3;CL:0002319!5.28e-07!43;CL:0000221!9.14e-07!44;CL:0000133!9.14e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,3.65e-65,3;CL:0000117,2.18e-09,23;CL:0000337,2.18e-09,23;CL:0000540,8.60e-07,33;CL:0000047,8.60e-07,33;CL:0000031,8.60e-07,33;CL:0000404,8.60e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!9.14e-12!6;UBERON:0005174!9.14e-12!6;UBERON:0001137!9.14e-12!6;UBERON:0001948!2.62e-10!5;UBERON:0002315!2.62e-10!5;UBERON:0002420!4.28e-09!8;UBERON:0007245!4.28e-09!8;UBERON:0010009!4.28e-09!8;UBERON:0010011!4.28e-09!8;UBERON:0000454!4.28e-09!8;UBERON:0001049!4.31e-09!52;UBERON:0005068!4.31e-09!52;UBERON:0006241!4.31e-09!52;UBERON:0007135!4.31e-09!52;UBERON:0002346!8.96e-09!71;UBERON:0003075!8.96e-09!71;UBERON:0007284!8.96e-09!71;UBERON:0001017!1.62e-07!73;UBERON:0005743!1.62e-07!73;UBERON:0003076!2.27e-07!12;UBERON:0003057!2.27e-07!12;UBERON:0002020!3.09e-07!34;UBERON:0000073!3.54e-07!75;UBERON:0001016!3.54e-07!75;UBERON:0002257!4.89e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.33e-39,5;UBERON:0002435,1.33e-39,5;UBERON:0000204,1.33e-39,5;UBERON:0010082,1.33e-39,5;UBERON:0002420,3.49e-25,8;UBERON:0007245,3.49e-25,8;UBERON:0010009,3.49e-25,8;UBERON:0010011,3.49e-25,8;UBERON:0000454,3.49e-25,8;UBERON:0003528,1.28e-07,29;UBERON:0002791,1.28e-07,29;UBERON:0001893,1.28e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0.191690942036473,0,0,0.127687338085188,0.153606533256243,1.45074916503213,3.38504281328916,1.04182674111352,0.279182999001381,0.56276261003168,0.15279824777681,0.294628585473668,0.569486723196412,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0,0,0.130120442962704,0,0.180062129805349,0,0.136072998302656,0,0.281105173679186,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540183282093931,0.129358683782755,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415149390336707,2.39414924040619,0.682934423016537,0,0,0,0,0.206035057238894,0,0.252697211763798,0.50695859978048,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0.561142271657738,0.355905054372522,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:72563657..72563666,+ | |||
}} |
Revision as of 13:04, 13 September 2013
Short description: | p@chr16:72563657..72563666, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:72563657..72563666, + |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 3.65e-65 | 3 |
CNS neuron (sensu Vertebrata) | 2.18e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.18e-09 | 23 |
neuron | 8.60e-07 | 33 |
neuronal stem cell | 8.60e-07 | 33 |
neuroblast | 8.60e-07 | 33 |
electrically signaling cell | 8.60e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.33e-39 | 5 |
striatum | 1.33e-39 | 5 |
ventral part of telencephalon | 1.33e-39 | 5 |
future corpus striatum | 1.33e-39 | 5 |
basal ganglion | 3.49e-25 | 8 |
nuclear complex of neuraxis | 3.49e-25 | 8 |
aggregate regional part of brain | 3.49e-25 | 8 |
collection of basal ganglia | 3.49e-25 | 8 |
cerebral subcortex | 3.49e-25 | 8 |
brain grey matter | 1.28e-07 | 29 |
regional part of telencephalon | 1.28e-07 | 29 |
telencephalon | 1.28e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.