FFCP PHASE1:Hg19::chr5:74162119..74162144,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26049|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29138|TSSclassifier=S|UniProt=|association_with_transcript=24bp_to_ENST00000510609_5end|description=CAGE_peak_3_at_FAM169A_5end|id=chr5:74162119..74162144,-|ontology_enrichment_celltype=CL:0000838!2.82e-12!52;CL:0000542!9.91e-12!53;CL:0000051!9.91e-12!53;CL:0000791!8.18e-09!18;CL:0000789!8.18e-09!18;CL:0002420!8.18e-09!18;CL:0002419!8.18e-09!18;CL:0000790!8.18e-09!18;CL:0000084!1.24e-08!25;CL:0000827!1.24e-08!25;CL:0000625!1.70e-07!11|ontology_enrichment_celltype_v019=CL:0000791;9.06e-12;18!CL:0000789;9.06e-12;18!CL:0002419;9.06e-12;18!CL:0000625;1.49e-10;11!CL:0000084;3.18e-10;25!CL:0000542;2.15e-08;53|ontology_enrichment_celltype_v019_2=CL:0000838,2.79e-15,52;CL:0000542,7.72e-15,53;CL:0000051,7.72e-15,53;CL:0000791,2.52e-12,18;CL:0000789,2.52e-12,18;CL:0002420,2.52e-12,18;CL:0002419,2.52e-12,18;CL:0000790,2.52e-12,18;CL:0000625,1.10e-10,11;CL:0000084,1.26e-10,25;CL:0000827,1.26e-10,25|ontology_enrichment_development_v019=CL:0000790;9.06e-12;18!UBERON:0006601;8.05e-11;82!CL:0000051;2.15e-08;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.97e-27!94;UBERON:0001016!1.97e-27!94;UBERON:0001017!1.98e-27!82;UBERON:0001049!1.59e-26!57;UBERON:0005068!1.59e-26!57;UBERON:0006241!1.59e-26!57;UBERON:0007135!1.59e-26!57;UBERON:0005743!1.60e-26!86;UBERON:0000955!7.20e-26!69;UBERON:0006238!7.20e-26!69;UBERON:0002616!2.76e-23!59;UBERON:0002780!2.54e-22!41;UBERON:0001890!2.54e-22!41;UBERON:0006240!2.54e-22!41;UBERON:0003080!2.56e-21!42;UBERON:0000153!1.13e-19!129;UBERON:0007811!1.13e-19!129;UBERON:0000033!1.22e-18!123;UBERON:0007023!2.45e-18!115;UBERON:0002020!4.82e-18!34;UBERON:0003528!4.82e-18!34;UBERON:0001893!7.58e-18!34;UBERON:0002346!1.40e-17!90;UBERON:0003075!1.51e-17!86;UBERON:0007284!1.51e-17!86;UBERON:0002791!4.28e-17!33;UBERON:0001869!5.61e-17!32;UBERON:0000924!1.67e-16!173;UBERON:0006601!1.67e-16!173;UBERON:0004121!2.81e-16!169;UBERON:0003056!1.75e-15!61;UBERON:0000956!6.10e-13!25;UBERON:0000203!6.10e-13!25;UBERON:0002619!1.10e-12!22;UBERON:0001950!1.88e-11!20|ontology_enrichment_uberon_v019=UBERON:0000073;5.33e-27;53!UBERON:0002616;5.33e-27;53!UBERON:0001893;3.58e-26;34!UBERON:0003528;4.93e-26;34!UBERON:0002020;4.93e-26;34!UBERON:0002619;5.04e-26;22!UBERON:0002780;5.81e-26;41!UBERON:0001890;5.81e-26;41!UBERON:0001869;2.88e-25;32!UBERON:0002791;4.93e-25;32!UBERON:0001950;1.69e-23;20!UBERON:0000956;3.09e-22;25!UBERON:0000203;3.09e-22;25!UBERON:0000955;2.93e-16;68!UBERON:0001017;1.17e-14;75!UBERON:0001016;2.22e-13;83!UBERON:0004732;3.31e-11;13!UBERON:0000200;3.06e-10;6!UBERON:0002420;3.46e-10;9!UBERON:0000125;3.46e-10;9!UBERON:0007245;3.46e-10;9!UBERON:0002308;3.46e-10;9!UBERON:0010009;3.46e-10;9!UBERON:0010011;3.46e-10;9!UBERON:0000454;3.46e-10;9!UBERON:0004733;9.49e-10;12!UBERON:0002028;9.49e-10;12!UBERON:0002298;1.16e-09;6!UBERON:0000349;1.79e-08;5!UBERON:0001894;4.40e-08;7!UBERON:0001872;9.93e-08;5!UBERON:0002021;1.50e-07;5!UBERON:0009663;2.01e-07;7!UBERON:0007023;2.30e-07;114!UBERON:0003296;4.38e-07;4!UBERON:0010133;4.38e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.75e-48,56;UBERON:0005068,1.75e-48,56;UBERON:0006241,1.75e-48,56;UBERON:0007135,1.75e-48,56;UBERON:0000073,7.78e-47,53;UBERON:0002616,7.78e-47,53;UBERON:0000955,2.66e-38,68;UBERON:0006238,2.66e-38,68;UBERON:0002780,3.55e-38,41;UBERON:0001890,3.55e-38,41;UBERON:0003080,3.55e-38,41;UBERON:0006240,3.55e-38,41;UBERON:0001017,1.95e-36,81;UBERON:0001016,5.07e-33,89;UBERON:0003075,1.26e-31,82;UBERON:0007284,1.26e-31,82;UBERON:0003528,2.07e-31,34;UBERON:0002020,2.07e-31,34;UBERON:0001893,5.02e-31,34;UBERON:0002346,1.85e-29,86;UBERON:0001869,3.33e-29,32;UBERON:0002791,1.28e-28,32;UBERON:0010371,7.87e-28,104;UBERON:0002619,2.30e-26,22;UBERON:0003056,2.83e-25,61;UBERON:0001950,9.27e-24,20;UBERON:0000956,1.57e-22,25;UBERON:0000203,1.57e-22,25;UBERON:0007023,2.91e-22,114;UBERON:0010314,3.76e-15,132;UBERON:0004121,6.52e-15,171;UBERON:0000924,6.52e-15,171;UBERON:0006601,6.52e-15,171;UBERON:0011216,1.57e-12,223;UBERON:0003076,2.94e-11,15;UBERON:0003057,2.94e-11,15;UBERON:0004732,3.62e-11,13;UBERON:0002420,2.05e-10,9;UBERON:0007245,2.05e-10,9;UBERON:0010009,2.05e-10,9;UBERON:0010011,2.05e-10,9;UBERON:0000454,2.05e-10,9;UBERON:0000125,2.60e-10,9;UBERON:0002308,2.60e-10,9;UBERON:0000200,2.86e-10,6;UBERON:0004733,1.02e-09,12;UBERON:0002028,1.02e-09,12;UBERON:0007277,1.02e-09,12;UBERON:0002298,1.58e-09,6;UBERON:0000025,2.32e-09,192;UBERON:0000349,9.38e-09,5;UBERON:0001894,1.65e-08,7;UBERON:0006222,1.65e-08,7;UBERON:0001872,9.29e-08,5;UBERON:0002021,1.27e-07,5;UBERON:0009663,1.52e-07,7;UBERON:0003296,1.88e-07,4;UBERON:0010133,1.88e-07,4;UBERON:0000369,3.84e-07,4;UBERON:0002435,3.84e-07,4;UBERON:0000204,3.84e-07,4;UBERON:0010082,3.84e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.547497700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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26049 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29138 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=24bp_to_ENST00000510609_5end | |||
|description=CAGE_peak_3_at_FAM169A_5end | |||
|id=chr5:74162119..74162144,- | |||
|ontology_enrichment_celltype=CL:0000838!2.82e-12!52;CL:0000542!9.91e-12!53;CL:0000051!9.91e-12!53;CL:0000791!8.18e-09!18;CL:0000789!8.18e-09!18;CL:0002420!8.18e-09!18;CL:0002419!8.18e-09!18;CL:0000790!8.18e-09!18;CL:0000084!1.24e-08!25;CL:0000827!1.24e-08!25;CL:0000625!1.70e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.06e-12;18!CL:0000789;9.06e-12;18!CL:0002419;9.06e-12;18!CL:0000625;1.49e-10;11!CL:0000084;3.18e-10;25!CL:0000542;2.15e-08;53 | |||
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|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p3@FAM169A | |||
}} |
Revision as of 16:24, 13 September 2013
Short description: | p3@FAM169A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_FAM169A_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000510609_5end |
EntrezGene: | FAM169A |
HGNC: | 29138 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.79e-15 | 52 |
lymphocyte | 7.72e-15 | 53 |
common lymphoid progenitor | 7.72e-15 | 53 |
mature alpha-beta T cell | 2.52e-12 | 18 |
alpha-beta T cell | 2.52e-12 | 18 |
immature T cell | 2.52e-12 | 18 |
mature T cell | 2.52e-12 | 18 |
immature alpha-beta T cell | 2.52e-12 | 18 |
CD8-positive, alpha-beta T cell | 1.10e-10 | 11 |
T cell | 1.26e-10 | 25 |
pro-T cell | 1.26e-10 | 25 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.