FFCP PHASE1:Mm9::chr19:9063511..9063554,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=66395|HGNC=|UniProt=G5E8I9|association_with_transcript=-195bp_to_ENSMUST00000079602_5end|description=CAGE_peak_4_at_Ahnak_5end|id=chr19:9063511..9063554,+|ontology_enrichment_celltype=CL:0000222!6.28e-07!7|ontology_enrichment_celltype_v019_2=CL:0000222,4.24e-30,7;CL:0000680,6.21e-25,6;CL:0000187,6.21e-25,6;CL:0000056,6.21e-25,6;CL:0000192,1.78e-18,3;CL:0000359,1.78e-18,3;CL:0002539,1.78e-18,3;CL:0000514,1.78e-18,3;CL:0000355,1.24e-16,9;CL:0000708,2.11e-13,2;CL:0002605,8.36e-13,2;CL:0002604,8.36e-13,2;CL:0000151,3.12e-09,3;CL:0000499,3.12e-09,3;CL:0000327,3.12e-09,3;CL:0002494,4.94e-09,3;CL:0000737,4.94e-09,3;CL:0000746,4.94e-09,3;CL:0000513,4.94e-09,3;CL:0000215,2.06e-08,3;CL:0002321,3.40e-07,70;CL:0000213,7.23e-07,1;CL:0002078,7.23e-07,1;CL:0000115,7.23e-07,1;CL:0002262,7.23e-07,1;CL:1000398,7.23e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000055,5.12e-19,5;UBERON:0007500,5.12e-19,5;UBERON:0001981,5.12e-19,5;UBERON:0002049,5.12e-19,5;UBERON:0007798,5.12e-19,5;UBERON:0004537,5.12e-19,5;UBERON:0006965,5.12e-19,5;UBERON:0001135,1.78e-18,3;UBERON:0004237,1.78e-18,3;UBERON:0004695,1.78e-18,3;UBERON:0002111,1.78e-18,3;UBERON:0004178,1.78e-18,3;UBERON:0001134,1.24e-16,9;UBERON:0002036,1.24e-16,9;UBERON:0002385,1.24e-16,9;UBERON:0000486,1.24e-16,9;UBERON:0007503,1.24e-16,9;UBERON:0001015,1.24e-16,9;UBERON:0002329,1.24e-16,9;UBERON:0003082,1.24e-16,9;UBERON:0003059,1.24e-16,9;UBERON:0007282,1.24e-16,9;UBERON:0004290,1.24e-16,9;UBERON:0009618,1.24e-16,9;UBERON:0000383,5.75e-15,10;UBERON:0000947,5.16e-14,4;UBERON:0001637,5.16e-14,4;UBERON:0004573,5.16e-14,4;UBERON:0003509,5.16e-14,4;UBERON:0004571,5.16e-14,4;UBERON:0010191,5.16e-14,4;UBERON:0004572,5.16e-14,4;UBERON:0007524,1.33e-13,11;UBERON:0003077,1.33e-13,11;UBERON:0007285,1.33e-13,11;UBERON:0003210,2.11e-13,2;UBERON:0004535,5.90e-09,23;UBERON:0001009,5.90e-09,23;UBERON:0000305,1.20e-07,1;UBERON:0002394,7.23e-07,1;UBERON:0001281,7.23e-07,1;UBERON:0000353,7.23e-07,1;UBERON:0003497,7.23e-07,1;UBERON:0003909,7.23e-07,1;UBERON:0003928,7.23e-07,1;UBERON:0003835,7.23e-07,1;UBERON:0003513,7.23e-07,1;UBERON:0001280,7.23e-07,1;UBERON:0004647,7.23e-07,1;UBERON:0002294,7.23e-07,1;UBERON:0001173,7.23e-07,1;UBERON:0004912,7.23e-07,1;UBERON:0005171,7.23e-07,1|phase1_expression=0.160148847104794,0.697950815278722,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,1.62203089951223,1.83546752161682,0,0.436050312760893,1.31811709640683,3.11087838518853,0.979904951377538,0,0,0,0,1.80081605225163,0.286533439938757,3.6097046459421,0,0,0,3.72728985276045,3.55717918444456,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,1.21161909333094,0.529000920747499,1.15945795480671,0,0,0.539703191637817,0.649776417447669,0.896053774194671,0,0,0.259786004602869,0,0,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0,0.346970653532272,0,0.691846491768175,0.301445281105245,0.117588707135705,0.125666591329675,7.91023896749996,0.433798070759735,0,0.647067399789637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.544291993210623,0.12811372028485,0.0937017245597288,0,0,0.378212160335639,0,0,0,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0.536546802799238,0,0.329119699826961,0,0,0,0.439100230582101,0.134206418760372,0,0,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.210407459670956,0.126473074248515,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0.827810238914197,0,0.117211686592203,0.327869890753351,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.488660878060728,0,1.32745138339963,0,0.302323556964751,0,0,0.307435147943927,0.775284879504663,0,0.712994756769443,0.316036757935816,1.05418608574999,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0.847328283455281,0.220528398054962,0,0,0.422190474497091,0.119372344003136,0.328281799490123,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.41326727862668,0.26175594198403,0,0,0,0,0,0,0.516639293910924,0.168956125490778,0.469428954583016,0.2604087696879,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0.453460767230423,0.221985953374065,0.0897138566094757,0.671538465456314,0.19318959403219,0.375364950902364,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0,0.209613162627982,0,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0,0.320125762024346,0.287177344778066,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.355905054372522,0.29551344712669,0.409231043169689,0.309873682371932,0,0.749431733813838,0.467863216890817,0,0.765153328275374,0.220591419119515,0.231867835620421|short_description=p4@Ahnak}} | ||
|EntrezGene=66395 | |||
|HGNC= | |||
|UniProt=G5E8I9 | |||
|association_with_transcript=-195bp_to_ENSMUST00000079602_5end | |||
|description=CAGE_peak_4_at_Ahnak_5end | |||
|id=chr19:9063511..9063554,+ | |||
|ontology_enrichment_celltype=CL:0000222!6.28e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.24e-30,7;CL:0000680,6.21e-25,6;CL:0000187,6.21e-25,6;CL:0000056,6.21e-25,6;CL:0000192,1.78e-18,3;CL:0000359,1.78e-18,3;CL:0002539,1.78e-18,3;CL:0000514,1.78e-18,3;CL:0000355,1.24e-16,9;CL:0000708,2.11e-13,2;CL:0002605,8.36e-13,2;CL:0002604,8.36e-13,2;CL:0000151,3.12e-09,3;CL:0000499,3.12e-09,3;CL:0000327,3.12e-09,3;CL:0002494,4.94e-09,3;CL:0000737,4.94e-09,3;CL:0000746,4.94e-09,3;CL:0000513,4.94e-09,3;CL:0000215,2.06e-08,3;CL:0002321,3.40e-07,70;CL:0000213,7.23e-07,1;CL:0002078,7.23e-07,1;CL:0000115,7.23e-07,1;CL:0002262,7.23e-07,1;CL:1000398,7.23e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,5.12e-19,5;UBERON:0007500,5.12e-19,5;UBERON:0001981,5.12e-19,5;UBERON:0002049,5.12e-19,5;UBERON:0007798,5.12e-19,5;UBERON:0004537,5.12e-19,5;UBERON:0006965,5.12e-19,5;UBERON:0001135,1.78e-18,3;UBERON:0004237,1.78e-18,3;UBERON:0004695,1.78e-18,3;UBERON:0002111,1.78e-18,3;UBERON:0004178,1.78e-18,3;UBERON:0001134,1.24e-16,9;UBERON:0002036,1.24e-16,9;UBERON:0002385,1.24e-16,9;UBERON:0000486,1.24e-16,9;UBERON:0007503,1.24e-16,9;UBERON:0001015,1.24e-16,9;UBERON:0002329,1.24e-16,9;UBERON:0003082,1.24e-16,9;UBERON:0003059,1.24e-16,9;UBERON:0007282,1.24e-16,9;UBERON:0004290,1.24e-16,9;UBERON:0009618,1.24e-16,9;UBERON:0000383,5.75e-15,10;UBERON:0000947,5.16e-14,4;UBERON:0001637,5.16e-14,4;UBERON:0004573,5.16e-14,4;UBERON:0003509,5.16e-14,4;UBERON:0004571,5.16e-14,4;UBERON:0010191,5.16e-14,4;UBERON:0004572,5.16e-14,4;UBERON:0007524,1.33e-13,11;UBERON:0003077,1.33e-13,11;UBERON:0007285,1.33e-13,11;UBERON:0003210,2.11e-13,2;UBERON:0004535,5.90e-09,23;UBERON:0001009,5.90e-09,23;UBERON:0000305,1.20e-07,1;UBERON:0002394,7.23e-07,1;UBERON:0001281,7.23e-07,1;UBERON:0000353,7.23e-07,1;UBERON:0003497,7.23e-07,1;UBERON:0003909,7.23e-07,1;UBERON:0003928,7.23e-07,1;UBERON:0003835,7.23e-07,1;UBERON:0003513,7.23e-07,1;UBERON:0001280,7.23e-07,1;UBERON:0004647,7.23e-07,1;UBERON:0002294,7.23e-07,1;UBERON:0001173,7.23e-07,1;UBERON:0004912,7.23e-07,1;UBERON:0005171,7.23e-07,1 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01434908760924,1.62203089951223,1.83546752161682,0,0.436050312760893,1.31811709640683,3.11087838518853,0.979904951377538,0,0,0,0,1.80081605225163,0.286533439938757,3.6097046459421,0,0,0,3.72728985276045,3.55717918444456,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,1.21161909333094,0.529000920747499,1.15945795480671,0,0,0.539703191637817,0.649776417447669,0.896053774194671,0,0,0.259786004602869,0,0,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0,0.346970653532272,0,0.691846491768175,0.301445281105245,0.117588707135705,0.125666591329675,7.91023896749996,0.433798070759735,0,0.647067399789637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.544291993210623,0.12811372028485,0.0937017245597288,0,0,0.378212160335639,0,0,0,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0.536546802799238,0,0.329119699826961,0,0,0,0.439100230582101,0.134206418760372,0,0,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.210407459670956,0.126473074248515,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0.585400943573396,0,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0.827810238914197,0,0.117211686592203,0.327869890753351,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.488660878060728,0,1.32745138339963,0,0.302323556964751,0,0,0.307435147943927,0.775284879504663,0,0.712994756769443,0.316036757935816,1.05418608574999,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0,0.847328283455281,0.220528398054962,0,0,0.422190474497091,0.119372344003136,0.328281799490123,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0.269728692769641,0.41326727862668,0.26175594198403,0,0,0,0,0,0,0.516639293910924,0.168956125490778,0.469428954583016,0.2604087696879,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,0.453460767230423,0.221985953374065,0.0897138566094757,0.671538465456314,0.19318959403219,0.375364950902364,0.36630324853453,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0,0.209613162627982,0,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0,0.320125762024346,0.287177344778066,0,0.115884325944855,0.38581844092741,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0,0,0.355905054372522,0.29551344712669,0.409231043169689,0.309873682371932,0,0.749431733813838,0.467863216890817,0,0.765153328275374,0.220591419119515,0.231867835620421 | |||
|short_description=p4@Ahnak | |||
}} |
Revision as of 18:29, 13 September 2013
Short description: | p4@Ahnak |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ahnak_5end |
Coexpression cluster: | NA |
Association with transcript: | -195bp_to_ENSMUST00000079602_5end |
EntrezGene: | Ahnak |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.24e-30 | 7 |
muscle precursor cell | 6.21e-25 | 6 |
muscle cell | 6.21e-25 | 6 |
myoblast | 6.21e-25 | 6 |
smooth muscle cell | 1.78e-18 | 3 |
vascular associated smooth muscle cell | 1.78e-18 | 3 |
aortic smooth muscle cell | 1.78e-18 | 3 |
smooth muscle myoblast | 1.78e-18 | 3 |
multi-potent skeletal muscle stem cell | 1.24e-16 | 9 |
leptomeningeal cell | 2.11e-13 | 2 |
astrocyte of the cerebral cortex | 8.36e-13 | 2 |
astrocyte of the hippocampus | 8.36e-13 | 2 |
secretory cell | 3.12e-09 | 3 |
stromal cell | 3.12e-09 | 3 |
extracellular matrix secreting cell | 3.12e-09 | 3 |
cardiocyte | 4.94e-09 | 3 |
striated muscle cell | 4.94e-09 | 3 |
cardiac muscle cell | 4.94e-09 | 3 |
cardiac muscle myoblast | 4.94e-09 | 3 |
barrier cell | 2.06e-08 | 3 |
embryonic cell | 3.40e-07 | 70 |
lining cell | 7.23e-07 | 1 |
meso-epithelial cell | 7.23e-07 | 1 |
endothelial cell | 7.23e-07 | 1 |
endothelial cell of sinusoid | 7.23e-07 | 1 |
endothelial cell of hepatic sinusoid | 7.23e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.