FFCP PHASE1:Mm9::chr2:151907546..151907561,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=545474|HGNC=|MCL_coexpression_id=22|UniProt=Q8BTH6|association_with_transcript=281bp_to_ENSMUST00000064061,NM_001160410,uc012cgb.1_5end|description=CAGE_peak_1_at_Scrt2_5end|id=chr2:151907546..151907561,+|ontology_enrichment_celltype=CL:0000117!6.92e-19!23;CL:0000337!6.92e-19!23;CL:0000540!8.29e-13!33;CL:0000047!8.29e-13!33;CL:0000031!8.29e-13!33;CL:0000404!8.29e-13!33;CL:0000221!1.19e-10!44;CL:0000133!1.19e-10!44;CL:0002319!3.13e-10!43;CL:0000393!2.58e-09!39;CL:0000211!2.58e-09!39;CL:0000055!2.19e-07!50;CL:0002609!7.88e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,1.92e-23,23;CL:0000337,1.92e-23,23;CL:0000540,8.28e-14,33;CL:0000047,8.28e-14,33;CL:0000031,8.28e-14,33;CL:0000404,8.28e-14,33;CL:0000393,1.72e-10,39;CL:0000211,1.72e-10,39;CL:0000221,4.64e-10,44;CL:0000133,4.64e-10,44;CL:0002319,1.41e-09,43;CL:0002609,3.21e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!9.16e-33!71;UBERON:0003075!9.16e-33!71;UBERON:0007284!9.16e-33!71;UBERON:0000033!1.66e-32!63;UBERON:0004121!5.47e-29!102;UBERON:0000924!5.47e-29!102;UBERON:0006601!5.47e-29!102;UBERON:0003056!8.26e-28!49;UBERON:0001049!2.10e-27!52;UBERON:0005068!2.10e-27!52;UBERON:0006241!2.10e-27!52;UBERON:0007135!2.10e-27!52;UBERON:0000073!3.99e-27!75;UBERON:0001016!3.99e-27!75;UBERON:0001017!1.21e-26!73;UBERON:0005743!1.21e-26!73;UBERON:0000955!7.00e-26!50;UBERON:0006238!7.00e-26!50;UBERON:0002616!3.87e-25!49;UBERON:0003080!1.41e-20!40;UBERON:0007811!6.30e-20!86;UBERON:0002780!8.88e-20!39;UBERON:0001890!8.88e-20!39;UBERON:0006240!8.88e-20!39;UBERON:0002020!1.19e-19!34;UBERON:0000153!2.26e-16!94;UBERON:0002791!3.53e-16!29;UBERON:0003528!3.53e-16!29;UBERON:0001893!3.53e-16!29;UBERON:0000956!1.13e-10!21;UBERON:0001869!1.13e-10!21;UBERON:0000203!1.13e-10!21;UBERON:0000970!4.55e-08!9;UBERON:0000019!4.55e-08!9;UBERON:0000047!4.55e-08!9;UBERON:0004088!4.55e-08!9;UBERON:0002104!4.55e-08!9;UBERON:0001456!4.55e-08!9;UBERON:0003072!4.55e-08!9;UBERON:0003071!4.55e-08!9;UBERON:0004128!4.55e-08!9;UBERON:0002619!1.08e-07!17;UBERON:0000020!1.39e-07!12;UBERON:0001032!1.39e-07!12;UBERON:0004456!1.39e-07!12;UBERON:0003076!2.69e-07!12;UBERON:0003057!2.69e-07!12;UBERON:0002420!6.69e-07!8;UBERON:0007245!6.69e-07!8;UBERON:0010009!6.69e-07!8;UBERON:0010011!6.69e-07!8;UBERON:0000454!6.69e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.49e-34,64;UBERON:0003075,2.49e-34,64;UBERON:0007284,2.49e-34,64;UBERON:0000073,1.82e-29,54;UBERON:0010371,3.07e-29,73;UBERON:0003056,8.28e-28,49;UBERON:0004121,9.51e-28,95;UBERON:0000924,9.51e-28,95;UBERON:0006601,9.51e-28,95;UBERON:0001049,1.12e-27,52;UBERON:0005068,1.12e-27,52;UBERON:0006241,1.12e-27,52;UBERON:0007135,1.12e-27,52;UBERON:0001017,3.55e-25,73;UBERON:0001016,4.58e-24,75;UBERON:0002020,1.82e-23,34;UBERON:0000955,3.59e-23,47;UBERON:0006238,3.59e-23,47;UBERON:0002616,2.62e-22,46;UBERON:0010314,1.18e-19,92;UBERON:0003080,3.00e-19,40;UBERON:0003528,4.16e-19,29;UBERON:0002791,4.16e-19,29;UBERON:0001893,4.16e-19,29;UBERON:0002780,2.56e-18,39;UBERON:0001890,2.56e-18,39;UBERON:0006240,2.56e-18,39;UBERON:0000956,3.14e-12,21;UBERON:0001869,3.14e-12,21;UBERON:0000203,3.14e-12,21;UBERON:0000970,8.85e-10,9;UBERON:0000019,8.85e-10,9;UBERON:0000047,8.85e-10,9;UBERON:0010312,8.85e-10,9;UBERON:0004088,8.85e-10,9;UBERON:0002104,8.85e-10,9;UBERON:0001456,8.85e-10,9;UBERON:0003072,8.85e-10,9;UBERON:0004128,8.85e-10,9;UBERON:0003071,8.85e-10,9;UBERON:0003076,5.60e-09,12;UBERON:0003057,5.60e-09,12;UBERON:0002619,1.50e-08,17;UBERON:0002420,2.61e-08,8;UBERON:0007245,2.61e-08,8;UBERON:0010009,2.61e-08,8;UBERON:0010011,2.61e-08,8;UBERON:0000454,2.61e-08,8;UBERON:0000020,4.56e-08,12;UBERON:0001032,4.56e-08,12;UBERON:0004456,4.56e-08,12;UBERON:0001444,1.55e-07,11;UBERON:0000033,3.12e-07,13;UBERON:0005085,3.12e-07,13|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0,0,0,0,0,0,0,0,0,0,34.191481885272,38.0873505075864,20.2826049121977,0,0,0,0,0,0,0.384218305321555,17.7309237047497,22.8160035780557,17.0363218694619,2.85650984403804,2.42955395046775,15.3113499018693,19.5524760877202,20.2228133054205,3.30347642998166,6.63974158042976,4.91540906419979,8.17694983927202,7.04454855738554,4.16730696445408,8.09630697104005,2.25105044012672,1.98637722109853,7.36571463684169,2.56269025438385,25.7231235238915,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0.913396434936424,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,3.22058876712702,2.93225389538837,0,0,0,0,7.48953197024113,7.77751024791665,11.1832373380449,2.60736480288415,2.55715457330331,6.02585329222724,4.05603157669394,0,0,0,1.47309299120532,3.513251959993,13.3343220571414,16.9258402017028,10.8507468841715,14.4917743192328,12.4270308676304,19.3962569838639,3.88055056108524,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0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| ||
|EntrezGene=545474 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=Q8BTH6 | |||
|association_with_transcript=281bp_to_ENSMUST00000064061,NM_001160410,uc012cgb.1_5end | |||
|description=CAGE_peak_1_at_Scrt2_5end | |||
|id=chr2:151907546..151907561,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.92e-19!23;CL:0000337!6.92e-19!23;CL:0000540!8.29e-13!33;CL:0000047!8.29e-13!33;CL:0000031!8.29e-13!33;CL:0000404!8.29e-13!33;CL:0000221!1.19e-10!44;CL:0000133!1.19e-10!44;CL:0002319!3.13e-10!43;CL:0000393!2.58e-09!39;CL:0000211!2.58e-09!39;CL:0000055!2.19e-07!50;CL:0002609!7.88e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.92e-23,23;CL:0000337,1.92e-23,23;CL:0000540,8.28e-14,33;CL:0000047,8.28e-14,33;CL:0000031,8.28e-14,33;CL:0000404,8.28e-14,33;CL:0000393,1.72e-10,39;CL:0000211,1.72e-10,39;CL:0000221,4.64e-10,44;CL:0000133,4.64e-10,44;CL:0002319,1.41e-09,43;CL:0002609,3.21e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.16e-33!71;UBERON:0003075!9.16e-33!71;UBERON:0007284!9.16e-33!71;UBERON:0000033!1.66e-32!63;UBERON:0004121!5.47e-29!102;UBERON:0000924!5.47e-29!102;UBERON:0006601!5.47e-29!102;UBERON:0003056!8.26e-28!49;UBERON:0001049!2.10e-27!52;UBERON:0005068!2.10e-27!52;UBERON:0006241!2.10e-27!52;UBERON:0007135!2.10e-27!52;UBERON:0000073!3.99e-27!75;UBERON:0001016!3.99e-27!75;UBERON:0001017!1.21e-26!73;UBERON:0005743!1.21e-26!73;UBERON:0000955!7.00e-26!50;UBERON:0006238!7.00e-26!50;UBERON:0002616!3.87e-25!49;UBERON:0003080!1.41e-20!40;UBERON:0007811!6.30e-20!86;UBERON:0002780!8.88e-20!39;UBERON:0001890!8.88e-20!39;UBERON:0006240!8.88e-20!39;UBERON:0002020!1.19e-19!34;UBERON:0000153!2.26e-16!94;UBERON:0002791!3.53e-16!29;UBERON:0003528!3.53e-16!29;UBERON:0001893!3.53e-16!29;UBERON:0000956!1.13e-10!21;UBERON:0001869!1.13e-10!21;UBERON:0000203!1.13e-10!21;UBERON:0000970!4.55e-08!9;UBERON:0000019!4.55e-08!9;UBERON:0000047!4.55e-08!9;UBERON:0004088!4.55e-08!9;UBERON:0002104!4.55e-08!9;UBERON:0001456!4.55e-08!9;UBERON:0003072!4.55e-08!9;UBERON:0003071!4.55e-08!9;UBERON:0004128!4.55e-08!9;UBERON:0002619!1.08e-07!17;UBERON:0000020!1.39e-07!12;UBERON:0001032!1.39e-07!12;UBERON:0004456!1.39e-07!12;UBERON:0003076!2.69e-07!12;UBERON:0003057!2.69e-07!12;UBERON:0002420!6.69e-07!8;UBERON:0007245!6.69e-07!8;UBERON:0010009!6.69e-07!8;UBERON:0010011!6.69e-07!8;UBERON:0000454!6.69e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.49e-34,64;UBERON:0003075,2.49e-34,64;UBERON:0007284,2.49e-34,64;UBERON:0000073,1.82e-29,54;UBERON:0010371,3.07e-29,73;UBERON:0003056,8.28e-28,49;UBERON:0004121,9.51e-28,95;UBERON:0000924,9.51e-28,95;UBERON:0006601,9.51e-28,95;UBERON:0001049,1.12e-27,52;UBERON:0005068,1.12e-27,52;UBERON:0006241,1.12e-27,52;UBERON:0007135,1.12e-27,52;UBERON:0001017,3.55e-25,73;UBERON:0001016,4.58e-24,75;UBERON:0002020,1.82e-23,34;UBERON:0000955,3.59e-23,47;UBERON:0006238,3.59e-23,47;UBERON:0002616,2.62e-22,46;UBERON:0010314,1.18e-19,92;UBERON:0003080,3.00e-19,40;UBERON:0003528,4.16e-19,29;UBERON:0002791,4.16e-19,29;UBERON:0001893,4.16e-19,29;UBERON:0002780,2.56e-18,39;UBERON:0001890,2.56e-18,39;UBERON:0006240,2.56e-18,39;UBERON:0000956,3.14e-12,21;UBERON:0001869,3.14e-12,21;UBERON:0000203,3.14e-12,21;UBERON:0000970,8.85e-10,9;UBERON:0000019,8.85e-10,9;UBERON:0000047,8.85e-10,9;UBERON:0010312,8.85e-10,9;UBERON:0004088,8.85e-10,9;UBERON:0002104,8.85e-10,9;UBERON:0001456,8.85e-10,9;UBERON:0003072,8.85e-10,9;UBERON:0004128,8.85e-10,9;UBERON:0003071,8.85e-10,9;UBERON:0003076,5.60e-09,12;UBERON:0003057,5.60e-09,12;UBERON:0002619,1.50e-08,17;UBERON:0002420,2.61e-08,8;UBERON:0007245,2.61e-08,8;UBERON:0010009,2.61e-08,8;UBERON:0010011,2.61e-08,8;UBERON:0000454,2.61e-08,8;UBERON:0000020,4.56e-08,12;UBERON:0001032,4.56e-08,12;UBERON:0004456,4.56e-08,12;UBERON:0001444,1.55e-07,11;UBERON:0000033,3.12e-07,13;UBERON:0005085,3.12e-07,13 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0,0,0,0,0,0,0,0,0,0,34.191481885272,38.0873505075864,20.2826049121977,0,0,0,0,0,0,0.384218305321555,17.7309237047497,22.8160035780557,17.0363218694619,2.85650984403804,2.42955395046775,15.3113499018693,19.5524760877202,20.2228133054205,3.30347642998166,6.63974158042976,4.91540906419979,8.17694983927202,7.04454855738554,4.16730696445408,8.09630697104005,2.25105044012672,1.98637722109853,7.36571463684169,2.56269025438385,25.7231235238915,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0.913396434936424,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,3.22058876712702,2.93225389538837,0,0,0,0,7.48953197024113,7.77751024791665,11.1832373380449,2.60736480288415,2.55715457330331,6.02585329222724,4.05603157669394,0,0,0,1.47309299120532,3.513251959993,13.3343220571414,16.9258402017028,10.8507468841715,14.4917743192328,12.4270308676304,19.3962569838639,3.88055056108524,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,5.45394445610208,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,5.62616095642575,0,0,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0,4.17717711348349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.517434735131018,0.214337035031592,0.532020700926821,1.24858172321449,1.64549020602121,2.13125464380219,0.23467170806371,0,0,0,0,0,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810900861160657,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,3.22227665555024,1.14579102687879,1.03111909406213,2.05524755931193,0.755393897389701,1.35004500046361,4.5032120322422,1.81256963593682,2.07104124700728,24.2862393346973,34.3161391124887,12.9757540373142,2.18796045361465,5.24032906569956,0.735374033800057,2.66696073361938,2.47242068686673,2.88827288632634,1.26348605881899,3.29523089857312,1.50901073108861,1.77918864192777,1.34452820050225,1.55075766180156,1.42888107384922,0.811190281613988,1.92909220463705,1.23625770240992,2.06078488188156,1.37147700954166,0.887379030796687,1.66905332963125,1.45346416632329,1.97629698872194,2.45382362885862,1.28049581010941,1.05227884575137,1.35804113845862,1.68342681497322,1.42362021749009,1.37906275325789,0.818462086339379,1.08455788830176,0.771626443924566,4.24677982494508,1.16965804222704,0.644613162144895,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Scrt2 | |||
}} |
Revision as of 22:25, 13 September 2013
Short description: | p1@Scrt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Scrt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 281bp_to_ENSMUST00000064061, NM_001160410, uc012cgb.1_5end |
EntrezGene: | Scrt2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.92e-23 | 23 |
neuroblast (sensu Vertebrata) | 1.92e-23 | 23 |
neuron | 8.28e-14 | 33 |
neuronal stem cell | 8.28e-14 | 33 |
neuroblast | 8.28e-14 | 33 |
electrically signaling cell | 8.28e-14 | 33 |
electrically responsive cell | 1.72e-10 | 39 |
electrically active cell | 1.72e-10 | 39 |
ectodermal cell | 4.64e-10 | 44 |
neurectodermal cell | 4.64e-10 | 44 |
neural cell | 1.41e-09 | 43 |
neuron of cerebral cortex | 3.21e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.