FFCP PHASE1:Mm9::chr2:25324376..25324388,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=234|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:25324376..25324388,-|id=chr2:25324376..25324388,-|ontology_enrichment_celltype=CL:0002319!4.92e-08!43;CL:0000221!1.03e-07!44;CL:0000133!1.03e-07!44;CL:0000117!2.10e-07!23;CL:0000337!2.10e-07!23|ontology_enrichment_celltype_v019_2=CL:0002614,1.08e-10,3;CL:0002610,5.03e-10,3;CL:0000878,4.03e-07,2;CL:0000129,4.03e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.80e-30!73;UBERON:0005743!6.80e-30!73;UBERON:0001049!1.05e-28!52;UBERON:0005068!1.05e-28!52;UBERON:0006241!1.05e-28!52;UBERON:0007135!1.05e-28!52;UBERON:0000073!1.12e-28!75;UBERON:0001016!1.12e-28!75;UBERON:0000955!7.58e-28!50;UBERON:0006238!7.58e-28!50;UBERON:0000033!1.09e-27!63;UBERON:0002616!9.22e-27!49;UBERON:0002346!5.84e-25!71;UBERON:0003075!5.84e-25!71;UBERON:0007284!5.84e-25!71;UBERON:0004121!2.43e-23!102;UBERON:0000924!2.43e-23!102;UBERON:0006601!2.43e-23!102;UBERON:0003056!8.62e-20!49;UBERON:0002020!1.54e-18!34;UBERON:0003080!3.34e-17!40;UBERON:0007811!1.45e-16!86;UBERON:0002780!2.92e-16!39;UBERON:0001890!2.92e-16!39;UBERON:0006240!2.92e-16!39;UBERON:0002791!2.53e-14!29;UBERON:0003528!2.53e-14!29;UBERON:0001893!2.53e-14!29;UBERON:0000153!5.06e-14!94;UBERON:0002021!5.20e-13!10;UBERON:0000411!5.20e-13!10;UBERON:0001950!5.20e-13!10;UBERON:0003076!7.09e-13!12;UBERON:0003057!7.09e-13!12;UBERON:0000956!2.07e-10!21;UBERON:0001869!2.07e-10!21;UBERON:0000203!2.07e-10!21;UBERON:0002619!2.37e-10!17;UBERON:0000025!9.69e-10!114;UBERON:0002298!9.78e-09!6;UBERON:0004111!2.68e-08!122;UBERON:0004733!8.58e-08!6;UBERON:0004732!8.58e-08!6;UBERON:0002028!8.58e-08!6;UBERON:0007277!8.58e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.90e-27,54;UBERON:0001017,6.77e-25,73;UBERON:0001016,4.31e-24,75;UBERON:0000955,1.78e-23,47;UBERON:0006238,1.78e-23,47;UBERON:0002021,3.97e-23,10;UBERON:0000411,3.97e-23,10;UBERON:0001950,3.97e-23,10;UBERON:0002616,1.05e-21,46;UBERON:0001049,6.47e-21,52;UBERON:0005068,6.47e-21,52;UBERON:0006241,6.47e-21,52;UBERON:0007135,6.47e-21,52;UBERON:0004121,1.68e-19,95;UBERON:0000924,1.68e-19,95;UBERON:0006601,1.68e-19,95;UBERON:0002346,6.54e-18,64;UBERON:0003075,6.54e-18,64;UBERON:0007284,6.54e-18,64;UBERON:0003528,2.32e-15,29;UBERON:0002791,2.32e-15,29;UBERON:0001893,2.32e-15,29;UBERON:0010371,3.95e-15,73;UBERON:0002020,7.03e-15,34;UBERON:0003080,6.93e-14,40;UBERON:0002950,5.59e-13,4;UBERON:0001891,5.59e-13,4;UBERON:0009616,5.59e-13,4;UBERON:0010286,5.59e-13,4;UBERON:0002619,6.04e-13,17;UBERON:0000956,1.51e-12,21;UBERON:0001869,1.51e-12,21;UBERON:0000203,1.51e-12,21;UBERON:0002780,1.95e-12,39;UBERON:0001890,1.95e-12,39;UBERON:0006240,1.95e-12,39;UBERON:0003056,2.51e-12,49;UBERON:0004733,1.42e-11,6;UBERON:0004732,1.42e-11,6;UBERON:0002028,1.42e-11,6;UBERON:0007277,1.42e-11,6;UBERON:0010314,4.81e-11,92;UBERON:0002038,1.08e-10,3;UBERON:0009663,1.08e-10,3;UBERON:0009661,1.08e-10,3;UBERON:0000125,1.08e-10,3;UBERON:0002308,1.08e-10,3;UBERON:0004684,5.03e-10,3;UBERON:0002275,5.03e-10,3;UBERON:0000025,6.29e-09,114;UBERON:0004111,4.99e-08,122;UBERON:0003076,5.10e-08,12;UBERON:0003057,5.10e-08,12;UBERON:0002037,8.84e-07,4;UBERON:0002680,8.84e-07,4;UBERON:0001895,8.84e-07,4;UBERON:0010092,8.84e-07,4;UBERON:0006215,8.84e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0.65407546914134,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99600110518405,6.14749288514487,0.207379224616955,0,0,0.285650984403804,3.3130281142742,0,0,0,9.91042928994498,4.85211884723713,3.07213066512487,0.131886287730194,0.182975287204819,0,17.0301629390842,15.757353080887,17.4190002465564,0.883885756421003,0.996601765593721,0.186399445825301,0,0,0,0,0,1.07940638327563,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,1.67557365450764,0,0,0,0,1.19832511523858,0.915001205637253,0,2.25971616249959,0.767146371990992,0.41557608911912,1.1356888414743,0,0,1.0108910337347,1.26265113531884,0,0,0,0.30140963567143,0.0680364991513279,0.384341160854549,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0.268273401399619,0,0,0,0,0,0,0.134206418760372,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,1.40654023910644,0,0,0,0,0,0,0,0,0,0.584511715822624,0.790575555893047,1.28528526568723,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.709360934569094,0.535106452806212,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.387479470433193,0.337912250981556,0.352071715937262,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,4.60325236507177,2.86447756719698,0.68741272937475,4.11049511862385,5.2877572817279,2.02506750069542,5.40385443869065,6.79713613476307,5.69536342927002,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0.294397840268795,0,0,0,0.436039249896986,0.0941093804153306,0,0.548783918618318,0,0,1.68342681497322,0,0.0985044823755635,0,0,0,0.499621155875892,0.233931608445408,0,0.382576664137687,0.220591419119515,0|short_description=p@chr2:25324376..25324388,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=234 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:25324376..25324388,- | |||
|id=chr2:25324376..25324388,- | |||
|ontology_enrichment_celltype=CL:0002319!4.92e-08!43;CL:0000221!1.03e-07!44;CL:0000133!1.03e-07!44;CL:0000117!2.10e-07!23;CL:0000337!2.10e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.08e-10,3;CL:0002610,5.03e-10,3;CL:0000878,4.03e-07,2;CL:0000129,4.03e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.80e-30!73;UBERON:0005743!6.80e-30!73;UBERON:0001049!1.05e-28!52;UBERON:0005068!1.05e-28!52;UBERON:0006241!1.05e-28!52;UBERON:0007135!1.05e-28!52;UBERON:0000073!1.12e-28!75;UBERON:0001016!1.12e-28!75;UBERON:0000955!7.58e-28!50;UBERON:0006238!7.58e-28!50;UBERON:0000033!1.09e-27!63;UBERON:0002616!9.22e-27!49;UBERON:0002346!5.84e-25!71;UBERON:0003075!5.84e-25!71;UBERON:0007284!5.84e-25!71;UBERON:0004121!2.43e-23!102;UBERON:0000924!2.43e-23!102;UBERON:0006601!2.43e-23!102;UBERON:0003056!8.62e-20!49;UBERON:0002020!1.54e-18!34;UBERON:0003080!3.34e-17!40;UBERON:0007811!1.45e-16!86;UBERON:0002780!2.92e-16!39;UBERON:0001890!2.92e-16!39;UBERON:0006240!2.92e-16!39;UBERON:0002791!2.53e-14!29;UBERON:0003528!2.53e-14!29;UBERON:0001893!2.53e-14!29;UBERON:0000153!5.06e-14!94;UBERON:0002021!5.20e-13!10;UBERON:0000411!5.20e-13!10;UBERON:0001950!5.20e-13!10;UBERON:0003076!7.09e-13!12;UBERON:0003057!7.09e-13!12;UBERON:0000956!2.07e-10!21;UBERON:0001869!2.07e-10!21;UBERON:0000203!2.07e-10!21;UBERON:0002619!2.37e-10!17;UBERON:0000025!9.69e-10!114;UBERON:0002298!9.78e-09!6;UBERON:0004111!2.68e-08!122;UBERON:0004733!8.58e-08!6;UBERON:0004732!8.58e-08!6;UBERON:0002028!8.58e-08!6;UBERON:0007277!8.58e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.90e-27,54;UBERON:0001017,6.77e-25,73;UBERON:0001016,4.31e-24,75;UBERON:0000955,1.78e-23,47;UBERON:0006238,1.78e-23,47;UBERON:0002021,3.97e-23,10;UBERON:0000411,3.97e-23,10;UBERON:0001950,3.97e-23,10;UBERON:0002616,1.05e-21,46;UBERON:0001049,6.47e-21,52;UBERON:0005068,6.47e-21,52;UBERON:0006241,6.47e-21,52;UBERON:0007135,6.47e-21,52;UBERON:0004121,1.68e-19,95;UBERON:0000924,1.68e-19,95;UBERON:0006601,1.68e-19,95;UBERON:0002346,6.54e-18,64;UBERON:0003075,6.54e-18,64;UBERON:0007284,6.54e-18,64;UBERON:0003528,2.32e-15,29;UBERON:0002791,2.32e-15,29;UBERON:0001893,2.32e-15,29;UBERON:0010371,3.95e-15,73;UBERON:0002020,7.03e-15,34;UBERON:0003080,6.93e-14,40;UBERON:0002950,5.59e-13,4;UBERON:0001891,5.59e-13,4;UBERON:0009616,5.59e-13,4;UBERON:0010286,5.59e-13,4;UBERON:0002619,6.04e-13,17;UBERON:0000956,1.51e-12,21;UBERON:0001869,1.51e-12,21;UBERON:0000203,1.51e-12,21;UBERON:0002780,1.95e-12,39;UBERON:0001890,1.95e-12,39;UBERON:0006240,1.95e-12,39;UBERON:0003056,2.51e-12,49;UBERON:0004733,1.42e-11,6;UBERON:0004732,1.42e-11,6;UBERON:0002028,1.42e-11,6;UBERON:0007277,1.42e-11,6;UBERON:0010314,4.81e-11,92;UBERON:0002038,1.08e-10,3;UBERON:0009663,1.08e-10,3;UBERON:0009661,1.08e-10,3;UBERON:0000125,1.08e-10,3;UBERON:0002308,1.08e-10,3;UBERON:0004684,5.03e-10,3;UBERON:0002275,5.03e-10,3;UBERON:0000025,6.29e-09,114;UBERON:0004111,4.99e-08,122;UBERON:0003076,5.10e-08,12;UBERON:0003057,5.10e-08,12;UBERON:0002037,8.84e-07,4;UBERON:0002680,8.84e-07,4;UBERON:0001895,8.84e-07,4;UBERON:0010092,8.84e-07,4;UBERON:0006215,8.84e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34717403304412,0.65407546914134,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99600110518405,6.14749288514487,0.207379224616955,0,0,0.285650984403804,3.3130281142742,0,0,0,9.91042928994498,4.85211884723713,3.07213066512487,0.131886287730194,0.182975287204819,0,17.0301629390842,15.757353080887,17.4190002465564,0.883885756421003,0.996601765593721,0.186399445825301,0,0,0,0,0,1.07940638327563,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17112318804619,1.67557365450764,0,0,0,0,1.19832511523858,0.915001205637253,0,2.25971616249959,0.767146371990992,0.41557608911912,1.1356888414743,0,0,1.0108910337347,1.26265113531884,0,0,0,0.30140963567143,0.0680364991513279,0.384341160854549,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0.268273401399619,0,0,0,0,0,0,0.134206418760372,0.420579897128254,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,1.40654023910644,0,0,0,0,0,0,0,0,0,0.584511715822624,0.790575555893047,1.28528526568723,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.709360934569094,0.535106452806212,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.387479470433193,0.337912250981556,0.352071715937262,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,4.60325236507177,2.86447756719698,0.68741272937475,4.11049511862385,5.2877572817279,2.02506750069542,5.40385443869065,6.79713613476307,5.69536342927002,0,0,0,0,0,0,0.44449345560323,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0,0,0,0.294397840268795,0,0,0,0.436039249896986,0.0941093804153306,0,0.548783918618318,0,0,1.68342681497322,0,0.0985044823755635,0,0,0,0.499621155875892,0.233931608445408,0,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr2:25324376..25324388,- | |||
}} |
Revision as of 23:27, 13 September 2013
Short description: | p@chr2:25324376..25324388, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:25324376..25324388, - |
Coexpression cluster: | MCL_coexpression_mm9:234 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.08e-10 | 3 |
raphe nuclei neuron | 5.03e-10 | 3 |
central nervous system macrophage | 4.03e-07 | 2 |
microglial cell | 4.03e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.