FFCP PHASE1:Mm9::chr2:31008686..31008692,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:31008686..31008692,-|id=chr2:31008686..31008692,-|ontology_enrichment_celltype=CL:0000239!6.57e-12!6;CL:0000677!6.57e-12!6;CL:0000212!6.57e-12!6;CL:0000584!6.57e-12!6;CL:0000066!7.53e-12!25;CL:0000075!4.79e-10!7;CL:0002563!7.05e-10!9;CL:0002251!7.05e-10!9;CL:0000223!3.01e-09!20;CL:0002076!1.01e-08!15|ontology_enrichment_celltype_v019_2=CL:0000239,6.32e-46,6;CL:0000677,6.32e-46,6;CL:0000584,6.32e-46,6;CL:0000075,1.94e-39,7;CL:0002563,8.81e-31,9;CL:0002251,8.81e-31,9;CL:0000066,1.68e-21,25;CL:0002076,1.26e-18,15;CL:0000682,2.04e-15,3;CL:0000223,4.81e-14,20;CL:0000473,3.77e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.94e-13!15;UBERON:0001242!2.15e-10!13;UBERON:0000060!2.15e-10!13;UBERON:0001262!2.15e-10!13;UBERON:0004786!2.15e-10!13;UBERON:0004923!4.46e-10!24;UBERON:0003350!7.05e-10!9;UBERON:0004808!7.05e-10!9;UBERON:0001277!7.05e-10!9;UBERON:0000485!8.09e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.81e-31,9;UBERON:0004808,8.81e-31,9;UBERON:0001277,8.81e-31,9;UBERON:0001242,2.22e-30,13;UBERON:0001262,2.22e-30,13;UBERON:0004786,2.22e-30,13;UBERON:0000344,2.28e-26,15;UBERON:0000485,2.91e-25,11;UBERON:0004923,1.46e-16,24;UBERON:0000160,7.50e-13,31;UBERON:0005409,1.71e-08,47|phase1_expression=0,8.37540978334467,5.0049916332849,11.1911758183527,10.0179145989269,1.00727563147134,0.700837921786577,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.91763712426868,2.29692785646008,3.01533397311352,0.861884930743556,0.190023419456374,1.00812051903972,0,0,0,0,0,0,0.204169356262369,0.418531630736908,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0.167782606057736,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0.869593466105033,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0.741584903203122,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.443971906748129,0.179427713218951,0.167884616364078,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:31008686..31008692,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:31008686..31008692,- | |||
|id=chr2:31008686..31008692,- | |||
|ontology_enrichment_celltype=CL:0000239!6.57e-12!6;CL:0000677!6.57e-12!6;CL:0000212!6.57e-12!6;CL:0000584!6.57e-12!6;CL:0000066!7.53e-12!25;CL:0000075!4.79e-10!7;CL:0002563!7.05e-10!9;CL:0002251!7.05e-10!9;CL:0000223!3.01e-09!20;CL:0002076!1.01e-08!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.32e-46,6;CL:0000677,6.32e-46,6;CL:0000584,6.32e-46,6;CL:0000075,1.94e-39,7;CL:0002563,8.81e-31,9;CL:0002251,8.81e-31,9;CL:0000066,1.68e-21,25;CL:0002076,1.26e-18,15;CL:0000682,2.04e-15,3;CL:0000223,4.81e-14,20;CL:0000473,3.77e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.94e-13!15;UBERON:0001242!2.15e-10!13;UBERON:0000060!2.15e-10!13;UBERON:0001262!2.15e-10!13;UBERON:0004786!2.15e-10!13;UBERON:0004923!4.46e-10!24;UBERON:0003350!7.05e-10!9;UBERON:0004808!7.05e-10!9;UBERON:0001277!7.05e-10!9;UBERON:0000485!8.09e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.81e-31,9;UBERON:0004808,8.81e-31,9;UBERON:0001277,8.81e-31,9;UBERON:0001242,2.22e-30,13;UBERON:0001262,2.22e-30,13;UBERON:0004786,2.22e-30,13;UBERON:0000344,2.28e-26,15;UBERON:0000485,2.91e-25,11;UBERON:0004923,1.46e-16,24;UBERON:0000160,7.50e-13,31;UBERON:0005409,1.71e-08,47 | |||
|phase1_expression=0,8.37540978334467,5.0049916332849,11.1911758183527,10.0179145989269,1.00727563147134,0.700837921786577,0.129123323441576,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.91763712426868,2.29692785646008,3.01533397311352,0.861884930743556,0.190023419456374,1.00812051903972,0,0,0,0,0,0,0.204169356262369,0.418531630736908,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0,0,0,0,0.167782606057736,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0.869593466105033,0,0.679971333707751,0,0,0,0,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0.741584903203122,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0.898819408654221,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.443971906748129,0.179427713218951,0.167884616364078,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:31008686..31008692,- | |||
}} |
Revision as of 23:43, 13 September 2013
Short description: | p@chr2:31008686..31008692, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:31008686..31008692, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.32e-46 | 6 |
gut absorptive cell | 6.32e-46 | 6 |
enterocyte | 6.32e-46 | 6 |
columnar/cuboidal epithelial cell | 1.94e-39 | 7 |
intestinal epithelial cell | 8.81e-31 | 9 |
epithelial cell of alimentary canal | 8.81e-31 | 9 |
epithelial cell | 1.68e-21 | 25 |
endo-epithelial cell | 1.26e-18 | 15 |
M cell of gut | 2.04e-15 | 3 |
endodermal cell | 4.81e-14 | 20 |
defensive cell | 3.77e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 8.81e-31 | 9 |
gastrointestinal system epithelium | 8.81e-31 | 9 |
intestinal epithelium | 8.81e-31 | 9 |
intestinal mucosa | 2.22e-30 | 13 |
wall of intestine | 2.22e-30 | 13 |
gastrointestinal system mucosa | 2.22e-30 | 13 |
mucosa | 2.28e-26 | 15 |
simple columnar epithelium | 2.91e-25 | 11 |
organ component layer | 1.46e-16 | 24 |
intestine | 7.50e-13 | 31 |
gastrointestinal system | 1.71e-08 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.