FFCP PHASE1:Hg19::chr7:150329530..150329552,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=474344|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21918|TSSclassifier=S|UniProt=Q6P9H5|association_with_transcript=-57bp_to_ENST00000328902_5end|coexpression_cluster_id=C1092|description=CAGE_peak_2_at_GIMAP6_5end|id=chr7:150329530..150329552,-|ontology_enrichment_celltype=CL:0002139!6.76e-23!24;CL:0000115!8.96e-23!35;CL:0000071!6.39e-18!18;CL:0002546!6.39e-18!18;CL:0002078!2.80e-15!44;CL:0000791!7.59e-15!18;CL:0000789!7.59e-15!18;CL:0002420!7.59e-15!18;CL:0002419!7.59e-15!18;CL:0000790!7.59e-15!18;CL:0002087!3.71e-14!119;CL:0000084!2.08e-13!25;CL:0000827!2.08e-13!25;CL:0000738!4.45e-13!140;CL:0002031!6.62e-12!124;CL:0000037!7.86e-12!172;CL:0000566!7.86e-12!172;CL:0000988!2.10e-10!182;CL:0000625!2.50e-10!11;CL:0002032!2.98e-10!165;CL:0000837!2.98e-10!165;CL:1000413!1.54e-09!9;CL:0000213!5.17e-09!57;CL:0000215!5.17e-09!57;CL:0002057!1.57e-08!42;CL:0000838!7.75e-08!52;CL:0000542!1.65e-07!53;CL:0000051!1.65e-07!53;CL:0000860!2.23e-07!45;CL:0002543!3.57e-07!6;CL:0002544!5.89e-07!6|ontology_enrichment_celltype_v019=CL:0002139;1.75e-32;24!CL:0000115;6.34e-28;36!CL:0000071;3.31e-25;18!CL:0000791;4.35e-19;18!CL:0000789;4.35e-19;18!CL:0002419;4.35e-19;18!CL:0000084;7.59e-17;25!CL:0002078;1.89e-15;45!CL:0000625;3.04e-14;11!CL:1000413;4.44e-13;9!CL:0000213;3.53e-10;58!CL:0000215;3.53e-10;58!CL:0002543;1.11e-09;6!CL:0002544;2.20e-09;6!CL:0002138;8.19e-09;6!CL:0000624;6.21e-08;6|ontology_enrichment_celltype_v019_2=CL:0000115,8.38e-33,36;CL:0002139,1.77e-32,24;CL:0000071,2.97e-25,18;CL:0002546,2.97e-25,18;CL:0002078,6.89e-24,45;CL:0000791,3.55e-19,18;CL:0000789,3.55e-19,18;CL:0002420,3.55e-19,18;CL:0002419,3.55e-19,18;CL:0000790,3.55e-19,18;CL:0000084,6.50e-17,25;CL:0000827,6.50e-17,25;CL:0000213,4.71e-16,58;CL:0000215,4.71e-16,58;CL:0000625,3.01e-14,11;CL:1000413,4.17e-13,9;CL:0002543,1.08e-09,6;CL:0002544,2.23e-09,6;CL:0005020,9.19e-09,6;CL:0002138,9.19e-09,6;CL:0005022,9.19e-09,6;CL:0000838,4.58e-08,52;CL:0000624,5.06e-08,6;CL:0000542,8.62e-08,53;CL:0000051,8.62e-08,53|ontology_enrichment_development_v019=CL:0002546;3.31e-25;18!CL:0000790;4.35e-19;18!CL:0005022;8.19e-09;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.48e-39!115;UBERON:0001986!6.39e-18!18;UBERON:0004638!6.39e-18!18;UBERON:0004852!6.39e-18!18;UBERON:0002193!1.95e-13!112;UBERON:0000487!3.77e-13!22;UBERON:0006914!1.23e-10!25;UBERON:0002390!3.65e-10!102;UBERON:0003061!3.65e-10!102;UBERON:0003915!1.54e-09!9;UBERON:0004700!1.54e-09!9;UBERON:0001917!1.54e-09!9;UBERON:0003081!2.80e-09!216;UBERON:0002405!2.43e-07!115;UBERON:0000178!5.07e-07!15;UBERON:0000179!5.07e-07!15;UBERON:0000463!5.07e-07!15;UBERON:0001009!6.35e-07!113|ontology_enrichment_uberon_v019=UBERON:0004638;3.31e-25;18!UBERON:0001986;3.31e-25;18!UBERON:0004852;3.31e-25;18!UBERON:0000487;2.19e-19;22!UBERON:0006914;2.86e-16;25!UBERON:0003915;4.44e-13;9!UBERON:0004700;4.44e-13;9!UBERON:0001917;4.44e-13;9!UBERON:0000490;4.46e-10;33!UBERON:0000178;8.65e-09;15!UBERON:0000179;8.65e-09;15!UBERON:0000463;8.65e-09;15!UBERON:0002465;5.60e-08;10!UBERON:0002193;5.62e-08;42!UBERON:0001638;6.39e-08;9!UBERON:0003920;6.39e-08;9!UBERON:0004582;6.39e-08;9|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.97e-25,18;UBERON:0001986,2.97e-25,18;UBERON:0004852,2.97e-25,18;UBERON:0000487,2.01e-19,22;UBERON:0006914,2.65e-16,25;UBERON:0007023,3.66e-15,114;UBERON:0001009,2.12e-13,112;UBERON:0003915,4.17e-13,9;UBERON:0004700,4.17e-13,9;UBERON:0001917,4.17e-13,9;UBERON:0004535,1.21e-12,109;UBERON:0000055,4.49e-11,68;UBERON:0000178,7.74e-09,15;UBERON:0000179,7.74e-09,15;UBERON:0000463,7.74e-09,15;UBERON:0003081,1.05e-08,203;UBERON:0002049,1.71e-08,78;UBERON:0007798,1.71e-08,78;UBERON:0002465,5.26e-08,10;UBERON:0001638,6.17e-08,9;UBERON:0003920,6.17e-08,9;UBERON:0004582,6.17e-08,9;UBERON:0007500,6.96e-08,59;UBERON:0001981,6.96e-08,59;UBERON:0004537,6.96e-08,59;UBERON:0006965,6.96e-08,59;UBERON:0004872,4.14e-07,83|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.314843125254717,1.57345710739562,0.767658796194425,1.08371286321253,0,0,0,0,0,0.293600439334847,0.553995408531877,0.601633342410425,1.73608696572681,1.34349284543955,0,0.77272670290256,0.872389432677388,0.377875943688809,0.485168122375632,0.464858073811369,0.411167888021826,0.309706370895104,0,0.512321413058201,0.47296445977717,0.344745680736619,0.645484683583826,0,0.188242339542605,0,0,1.22433556948361,0.320929027076094,0,1.64925650093358,0.997318288108159,1.70489900213078,0.580418477257168,0,0,0.502497330513487,1.5644487552606,0.868755378820466,0.605399502633369,0.368277635987565,0,1.69004229049553,1.70083439972035,1.67726916406701,2.2465726229299,1.80212271409808,0.48217676009124,1.42506371870624,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,3.73748563216283,3.93010762749165,5.34563897398724,0.50155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77,4.35433495793923,1.71116650542641,1.75115337837928,0.645499848534087,1.99596213927608,0,0,0,0,0,3.91172621385173,0.813792356631477,2.66302709674205,3.62292828463847,0.641136984606466|short_description=p2@GIMAP6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=474344 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21918 | |||
|TSSclassifier=S | |||
|UniProt=Q6P9H5 | |||
|association_with_transcript=-57bp_to_ENST00000328902_5end | |||
|coexpression_cluster_id=C1092 | |||
|description=CAGE_peak_2_at_GIMAP6_5end | |||
|id=chr7:150329530..150329552,- | |||
|ontology_enrichment_celltype=CL:0002139!6.76e-23!24;CL:0000115!8.96e-23!35;CL:0000071!6.39e-18!18;CL:0002546!6.39e-18!18;CL:0002078!2.80e-15!44;CL:0000791!7.59e-15!18;CL:0000789!7.59e-15!18;CL:0002420!7.59e-15!18;CL:0002419!7.59e-15!18;CL:0000790!7.59e-15!18;CL:0002087!3.71e-14!119;CL:0000084!2.08e-13!25;CL:0000827!2.08e-13!25;CL:0000738!4.45e-13!140;CL:0002031!6.62e-12!124;CL:0000037!7.86e-12!172;CL:0000566!7.86e-12!172;CL:0000988!2.10e-10!182;CL:0000625!2.50e-10!11;CL:0002032!2.98e-10!165;CL:0000837!2.98e-10!165;CL:1000413!1.54e-09!9;CL:0000213!5.17e-09!57;CL:0000215!5.17e-09!57;CL:0002057!1.57e-08!42;CL:0000838!7.75e-08!52;CL:0000542!1.65e-07!53;CL:0000051!1.65e-07!53;CL:0000860!2.23e-07!45;CL:0002543!3.57e-07!6;CL:0002544!5.89e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.75e-32;24!CL:0000115;6.34e-28;36!CL:0000071;3.31e-25;18!CL:0000791;4.35e-19;18!CL:0000789;4.35e-19;18!CL:0002419;4.35e-19;18!CL:0000084;7.59e-17;25!CL:0002078;1.89e-15;45!CL:0000625;3.04e-14;11!CL:1000413;4.44e-13;9!CL:0000213;3.53e-10;58!CL:0000215;3.53e-10;58!CL:0002543;1.11e-09;6!CL:0002544;2.20e-09;6!CL:0002138;8.19e-09;6!CL:0000624;6.21e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.38e-33,36;CL:0002139,1.77e-32,24;CL:0000071,2.97e-25,18;CL:0002546,2.97e-25,18;CL:0002078,6.89e-24,45;CL:0000791,3.55e-19,18;CL:0000789,3.55e-19,18;CL:0002420,3.55e-19,18;CL:0002419,3.55e-19,18;CL:0000790,3.55e-19,18;CL:0000084,6.50e-17,25;CL:0000827,6.50e-17,25;CL:0000213,4.71e-16,58;CL:0000215,4.71e-16,58;CL:0000625,3.01e-14,11;CL:1000413,4.17e-13,9;CL:0002543,1.08e-09,6;CL:0002544,2.23e-09,6;CL:0005020,9.19e-09,6;CL:0002138,9.19e-09,6;CL:0005022,9.19e-09,6;CL:0000838,4.58e-08,52;CL:0000624,5.06e-08,6;CL:0000542,8.62e-08,53;CL:0000051,8.62e-08,53 | |||
|ontology_enrichment_development_v019=CL:0002546;3.31e-25;18!CL:0000790;4.35e-19;18!CL:0005022;8.19e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.48e-39!115;UBERON:0001986!6.39e-18!18;UBERON:0004638!6.39e-18!18;UBERON:0004852!6.39e-18!18;UBERON:0002193!1.95e-13!112;UBERON:0000487!3.77e-13!22;UBERON:0006914!1.23e-10!25;UBERON:0002390!3.65e-10!102;UBERON:0003061!3.65e-10!102;UBERON:0003915!1.54e-09!9;UBERON:0004700!1.54e-09!9;UBERON:0001917!1.54e-09!9;UBERON:0003081!2.80e-09!216;UBERON:0002405!2.43e-07!115;UBERON:0000178!5.07e-07!15;UBERON:0000179!5.07e-07!15;UBERON:0000463!5.07e-07!15;UBERON:0001009!6.35e-07!113 | |||
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| |||
|short_description=p2@GIMAP6 | |||
}} |
Revision as of 23:56, 13 September 2013
Short description: | p2@GIMAP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GIMAP6_5end |
Coexpression cluster: | C1092_Hepatic_CD8_CD4_Endothelial_Renal_lymph_spleen |
Association with transcript: | -57bp_to_ENST00000328902_5end |
EntrezGene: | GIMAP6 |
HGNC: | 21918 |
UniProt: | Q6P9H5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.38e-33 | 36 |
endothelial cell of vascular tree | 1.77e-32 | 24 |
blood vessel endothelial cell | 2.97e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.97e-25 | 18 |
meso-epithelial cell | 6.89e-24 | 45 |
mature alpha-beta T cell | 3.55e-19 | 18 |
alpha-beta T cell | 3.55e-19 | 18 |
immature T cell | 3.55e-19 | 18 |
mature T cell | 3.55e-19 | 18 |
immature alpha-beta T cell | 3.55e-19 | 18 |
T cell | 6.50e-17 | 25 |
pro-T cell | 6.50e-17 | 25 |
lining cell | 4.71e-16 | 58 |
barrier cell | 4.71e-16 | 58 |
CD8-positive, alpha-beta T cell | 3.01e-14 | 11 |
endothelial cell of artery | 4.17e-13 | 9 |
vein endothelial cell | 1.08e-09 | 6 |
aortic endothelial cell | 2.23e-09 | 6 |
lymphangioblast | 9.19e-09 | 6 |
endothelial cell of lymphatic vessel | 9.19e-09 | 6 |
vascular lymphangioblast | 9.19e-09 | 6 |
lymphoid lineage restricted progenitor cell | 4.58e-08 | 52 |
CD4-positive, alpha-beta T cell | 5.06e-08 | 6 |
lymphocyte | 8.62e-08 | 53 |
common lymphoid progenitor | 8.62e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.97e-25 | 18 |
endothelium | 2.97e-25 | 18 |
cardiovascular system endothelium | 2.97e-25 | 18 |
simple squamous epithelium | 2.01e-19 | 22 |
squamous epithelium | 2.65e-16 | 25 |
adult organism | 3.66e-15 | 114 |
circulatory system | 2.12e-13 | 112 |
endothelial tube | 4.17e-13 | 9 |
arterial system endothelium | 4.17e-13 | 9 |
endothelium of artery | 4.17e-13 | 9 |
cardiovascular system | 1.21e-12 | 109 |
vessel | 4.49e-11 | 68 |
blood | 7.74e-09 | 15 |
haemolymphatic fluid | 7.74e-09 | 15 |
organism substance | 7.74e-09 | 15 |
lateral plate mesoderm | 1.05e-08 | 203 |
vasculature | 1.71e-08 | 78 |
vascular system | 1.71e-08 | 78 |
lymphoid system | 5.26e-08 | 10 |
vein | 6.17e-08 | 9 |
venous blood vessel | 6.17e-08 | 9 |
venous system | 6.17e-08 | 9 |
epithelial tube open at both ends | 6.96e-08 | 59 |
blood vessel | 6.96e-08 | 59 |
blood vasculature | 6.96e-08 | 59 |
vascular cord | 6.96e-08 | 59 |
splanchnic layer of lateral plate mesoderm | 4.14e-07 | 83 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.