FFCP PHASE1:Hg19::chr8:119919156..119919163,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C510|description=CAGE_peak_at_chr8:119919156..119919163,+|id=chr8:119919156..119919163,+|ontology_enrichment_celltype=CL:0002057!2.36e-14!42;CL:0000860!5.07e-13!45;CL:0002194!9.96e-11!63;CL:0000576!9.96e-11!63;CL:0000040!9.96e-11!63;CL:0000559!9.96e-11!63;CL:0002009!3.23e-10!65;CL:0000839!4.51e-09!70;CL:0000557!7.28e-09!71;CL:0000766!6.54e-08!76;CL:0000077!3.17e-07!19|ontology_enrichment_celltype_v019=CL:0000860;5.91e-13;33!CL:0002057;5.91e-13;33!CL:0000473;1.11e-08;39!CL:0000234;1.11e-08;39|ontology_enrichment_celltype_v019_2=CL:0000860,6.65e-11,42;CL:0002057,6.65e-11,42;CL:0000473,2.54e-09,48;CL:0000234,2.54e-09,48;CL:0002194,9.15e-09,59;CL:0000576,9.15e-09,59;CL:0000040,9.15e-09,59;CL:0000559,9.15e-09,59;CL:0002009,2.04e-08,61;CL:0000839,1.22e-07,66;CL:0000557,1.69e-07,67;CL:0000766,7.49e-07,72|ontology_enrichment_development_v019=CL:0002057;1.43e-07;42|ontology_enrichment_disease=DOID:2394!5.77e-14!14;DOID:120!7.79e-09!27;DOID:193!5.06e-08!29|ontology_enrichment_disease_v019=DOID:2394;7.09e-24;14!DOID:120;8.42e-12;27!DOID:193;6.65e-11;29!DOID:0060085;2.95e-07;1!DOID:3165;2.95e-07;1!DOID:0060121;2.95e-07;1!DOID:2438;2.95e-07;1!DOID:4418;2.95e-07;1!DOID:3347;7.82e-07;1|ontology_enrichment_disease_v019_2=DOID:2394,9.37e-24,14;DOID:120,9.66e-12,27;DOID:193,7.55e-11,29;DOID:0060085,2.95e-07,1;DOID:3165,2.95e-07,1;DOID:0060121,2.95e-07,1;DOID:2438,2.95e-07,1;DOID:4418,2.95e-07,1;DOID:3347,6.99e-07,1|ontology_enrichment_uberon=UBERON:0000992!1.18e-09!13;UBERON:0002119!1.60e-09!4;UBERON:0004531!1.60e-09!4;UBERON:0002371!3.06e-07!80;UBERON:0001474!3.55e-07!86;UBERON:0002118!3.87e-07!5;UBERON:0004532!3.87e-07!5|ontology_enrichment_uberon_v019=UBERON:0002119;3.22e-22;4!UBERON:0000992;9.85e-15;13!UBERON:0000991;6.70e-09;21|ontology_enrichment_uberon_v019_2=UBERON:0002119,2.97e-22,4;UBERON:0000992,9.99e-15,13;UBERON:0000991,6.76e-09,21;UBERON:0009196,6.76e-09,21;UBERON:0009117,6.76e-09,21;UBERON:0005564,6.76e-09,21;UBERON:0004176,1.82e-08,22;UBERON:0001474,5.28e-07,82|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0.822335776043652,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,2.41321976515633,0.645484683583826,1.35426486594342,0,0,0.449446968890169,1.22433556948361,1.60464513538047,0,0,0,0,1.16083695451434,1.70215567407342,1.24564449799115,0.251248665256743,0,0.868755378820466,1.21079900526674,4.41933163185078,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,6.62045904066094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323745888736263,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,6.25798129319264,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.839910640994298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,1.42636905040718,1.15825045334063,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.819989904948992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,2.73136752010076,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890469640183247,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,108.895607213238,0,0,0.320635281006135,0,0,0,0,0,0,0.124252535565433,0,4.48483880042926,3.87030531355633,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49762389287786,0,0,0,0,0,0,0,0,0,0,0,12.577642158734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.64624482385772,1.34940933649081,6.21051827505038,1.24411862352257,1.06336685823198,0,0,4.18885733385675,1.22061219961398,0,13.4263196303111,0.464033759878494,0.796191777397232,0.400027764663154,0,0,0,0,0.428883182749851,0,0,0.231522474323834,59.7157558995781,0.179088841081487,0,2.19284049578707,28.9770199351245,4.05119480368921,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,2.54403480522735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,2.7614397042404,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0.93061915699296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,1.46525883499754,0,0,0,0,0,0.406896178315738,0,0,0|short_description=p@chr8:119919156..119919163,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C510 | |||
|description=CAGE_peak_at_chr8:119919156..119919163,+ | |||
|id=chr8:119919156..119919163,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.36e-14!42;CL:0000860!5.07e-13!45;CL:0002194!9.96e-11!63;CL:0000576!9.96e-11!63;CL:0000040!9.96e-11!63;CL:0000559!9.96e-11!63;CL:0002009!3.23e-10!65;CL:0000839!4.51e-09!70;CL:0000557!7.28e-09!71;CL:0000766!6.54e-08!76;CL:0000077!3.17e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.91e-13;33!CL:0002057;5.91e-13;33!CL:0000473;1.11e-08;39!CL:0000234;1.11e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.65e-11,42;CL:0002057,6.65e-11,42;CL:0000473,2.54e-09,48;CL:0000234,2.54e-09,48;CL:0002194,9.15e-09,59;CL:0000576,9.15e-09,59;CL:0000040,9.15e-09,59;CL:0000559,9.15e-09,59;CL:0002009,2.04e-08,61;CL:0000839,1.22e-07,66;CL:0000557,1.69e-07,67;CL:0000766,7.49e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002057;1.43e-07;42 | |||
|ontology_enrichment_disease=DOID:2394!5.77e-14!14;DOID:120!7.79e-09!27;DOID:193!5.06e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.09e-24;14!DOID:120;8.42e-12;27!DOID:193;6.65e-11;29!DOID:0060085;2.95e-07;1!DOID:3165;2.95e-07;1!DOID:0060121;2.95e-07;1!DOID:2438;2.95e-07;1!DOID:4418;2.95e-07;1!DOID:3347;7.82e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.37e-24,14;DOID:120,9.66e-12,27;DOID:193,7.55e-11,29;DOID:0060085,2.95e-07,1;DOID:3165,2.95e-07,1;DOID:0060121,2.95e-07,1;DOID:2438,2.95e-07,1;DOID:4418,2.95e-07,1;DOID:3347,6.99e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000992!1.18e-09!13;UBERON:0002119!1.60e-09!4;UBERON:0004531!1.60e-09!4;UBERON:0002371!3.06e-07!80;UBERON:0001474!3.55e-07!86;UBERON:0002118!3.87e-07!5;UBERON:0004532!3.87e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002119;3.22e-22;4!UBERON:0000992;9.85e-15;13!UBERON:0000991;6.70e-09;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002119,2.97e-22,4;UBERON:0000992,9.99e-15,13;UBERON:0000991,6.76e-09,21;UBERON:0009196,6.76e-09,21;UBERON:0009117,6.76e-09,21;UBERON:0005564,6.76e-09,21;UBERON:0004176,1.82e-08,22;UBERON:0001474,5.28e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0.822335776043652,0.619412741790207,0.28769239232215,0.256160706529101,0.236482229888585,2.41321976515633,0.645484683583826,1.35426486594342,0,0,0.449446968890169,1.22433556948361,1.60464513538047,0,0,0,0,1.16083695451434,1.70215567407342,1.24564449799115,0.251248665256743,0,0.868755378820466,1.21079900526674,4.41933163185078,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,6.62045904066094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323745888736263,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,6.25798129319264,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.839910640994298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,1.42636905040718,1.15825045334063,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.819989904948992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,2.73136752010076,0.131124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890469640183247,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,108.895607213238,0,0,0.320635281006135,0,0,0,0,0,0,0.124252535565433,0,4.48483880042926,3.87030531355633,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49762389287786,0,0,0,0,0,0,0,0,0,0,0,12.577642158734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.64624482385772,1.34940933649081,6.21051827505038,1.24411862352257,1.06336685823198,0,0,4.18885733385675,1.22061219961398,0,13.4263196303111,0.464033759878494,0.796191777397232,0.400027764663154,0,0,0,0,0.428883182749851,0,0,0.231522474323834,59.7157558995781,0.179088841081487,0,2.19284049578707,28.9770199351245,4.05119480368921,0,0,0,0.607719912354764,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0.127894371303652,0,0,0,0,0,0.123935764259002,0,2.54403480522735,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235939446695481,0,0,0,2.7614397042404,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0.93061915699296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,1.46525883499754,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr8:119919156..119919163,+ | |||
}} |
Revision as of 03:18, 14 September 2013
Short description: | p@chr8:119919156..119919163, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:119919156..119919163, + |
Coexpression cluster: | C510_fibrous_mesothelioma_cholangiocellular_liposarcoma_Fibroblast_mesenchymal_leukemia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.65e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.65e-11 | 42 |
defensive cell | 2.54e-09 | 48 |
phagocyte | 2.54e-09 | 48 |
monopoietic cell | 9.15e-09 | 59 |
monocyte | 9.15e-09 | 59 |
monoblast | 9.15e-09 | 59 |
promonocyte | 9.15e-09 | 59 |
macrophage dendritic cell progenitor | 2.04e-08 | 61 |
myeloid lineage restricted progenitor cell | 1.22e-07 | 66 |
granulocyte monocyte progenitor cell | 1.69e-07 | 67 |
myeloid leukocyte | 7.49e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
left ovary | 2.97e-22 | 4 |
female gonad | 9.99e-15 | 13 |
gonad | 6.76e-09 | 21 |
indifferent external genitalia | 6.76e-09 | 21 |
indifferent gonad | 6.76e-09 | 21 |
gonad primordium | 6.76e-09 | 21 |
external genitalia | 1.82e-08 | 22 |
bone element | 5.28e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.37e-24 | 14 |
female reproductive organ cancer | 9.66e-12 | 27 |
reproductive organ cancer | 7.55e-11 | 29 |
organ system benign neoplasm | 2.95e-07 | 1 |
skin benign neoplasm | 2.95e-07 | 1 |
integumentary system benign neoplasm | 2.95e-07 | 1 |
dermis tumor | 2.95e-07 | 1 |
cutaneous fibrous histiocytoma | 2.95e-07 | 1 |
osteosarcoma | 6.99e-07 | 1 |
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