FFCP PHASE1:Mm9::chr5:52957429..52957457,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=246316|HGNC=|MCL_coexpression_id=1|UniProt=Q8K4Z0|association_with_transcript=26bp_to_ENSMUST00000113928_5end|description=CAGE_peak_4_at_Lgi2_5end|id=chr5:52957429..52957457,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.20e-13!71;UBERON:0003075!1.20e-13!71;UBERON:0007284!1.20e-13!71;UBERON:0000033!1.25e-13!63;UBERON:0001049!1.30e-11!52;UBERON:0005068!1.30e-11!52;UBERON:0006241!1.30e-11!52;UBERON:0007135!1.30e-11!52;UBERON:0000955!3.17e-11!50;UBERON:0006238!3.17e-11!50;UBERON:0003056!7.74e-11!49;UBERON:0002616!1.11e-10!49;UBERON:0001017!1.09e-08!73;UBERON:0005743!1.09e-08!73;UBERON:0002021!1.31e-08!10;UBERON:0000411!1.31e-08!10;UBERON:0001950!1.31e-08!10;UBERON:0002020!1.63e-08!34;UBERON:0004121!1.77e-08!102;UBERON:0000924!1.77e-08!102;UBERON:0006601!1.77e-08!102;UBERON:0000073!5.95e-08!75;UBERON:0001016!5.95e-08!75;UBERON:0003080!7.14e-08!40;UBERON:0002780!2.34e-07!39;UBERON:0001890!2.34e-07!39;UBERON:0006240!2.34e-07!39;UBERON:0007811!2.40e-07!86;UBERON:0000153!9.95e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.28e-23,54;UBERON:0002346,6.50e-23,64;UBERON:0003075,6.50e-23,64;UBERON:0007284,6.50e-23,64;UBERON:0001049,5.75e-21,52;UBERON:0005068,5.75e-21,52;UBERON:0006241,5.75e-21,52;UBERON:0007135,5.75e-21,52;UBERON:0000955,3.31e-20,47;UBERON:0006238,3.31e-20,47;UBERON:0002021,3.61e-19,10;UBERON:0000411,3.61e-19,10;UBERON:0001950,3.61e-19,10;UBERON:0010371,5.00e-19,73;UBERON:0002616,5.97e-19,46;UBERON:0001017,4.03e-18,73;UBERON:0003056,7.29e-18,49;UBERON:0004121,1.97e-17,95;UBERON:0000924,1.97e-17,95;UBERON:0006601,1.97e-17,95;UBERON:0001016,2.05e-17,75;UBERON:0003080,1.25e-14,40;UBERON:0010314,2.25e-14,92;UBERON:0002020,3.31e-14,34;UBERON:0003528,8.64e-14,29;UBERON:0002791,8.64e-14,29;UBERON:0001893,8.64e-14,29;UBERON:0002780,1.95e-13,39;UBERON:0001890,1.95e-13,39;UBERON:0006240,1.95e-13,39;UBERON:0002619,2.79e-12,17;UBERON:0000956,2.14e-11,21;UBERON:0001869,2.14e-11,21;UBERON:0000203,2.14e-11,21;UBERON:0002950,6.23e-08,4;UBERON:0001891,6.23e-08,4;UBERON:0009616,6.23e-08,4;UBERON:0010286,6.23e-08,4;UBERON:0003076,3.64e-07,12;UBERON:0003057,3.64e-07,12;UBERON:0000025,6.17e-07,114|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,0,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,1.14260393761521,2.65042249141936,0,0,0,3.30347642998166,3.19218345212969,2.76491759861238,0.659431438650969,0.457438218012048,0,4.4669279840221,2.8138130501584,3.66715794664344,0.589257170947335,0.854230084794618,0.559198337475902,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.867426633830679,0,1.15307748628029,0.150722640552623,0.23517741427141,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0,0,0,7.31951992528868,5.02672096352292,0,0,0,0,4.19413790333504,2.28750301409313,0.879580464790051,6.08385120672968,5.62574006126727,4.1557608911912,3.40706652442291,1.01839363850316,0.248813941220186,0,0.210441855886474,0.390361328888111,0.459804208866946,1.62055916824814,1.20563854268572,1.49680298132921,1.66547836370305,0.749613796477831,1.81092359517311,0,0,0.527853372491847,0.657587197282725,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0.134206418760372,2.10289948564127,0.308713837137853,0,0.264450566663544,0.853153002140936,0.696710015581316,0.257734922644187,0.605050573870028,0.444756087689741,0.951128130562796,0,0.494096864172033,0,0.795825888164603,0.19496408711912,1.79763881730844,0.216138049874694,0,0.569003702859245,0.571242563048644,1.1270773567308,0.610953983535943,0.193952487167626,0.280543279561274,0.505892296994058,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,1.24815069245824,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.509235257325564,0,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0,0,0.433947175744535,0,0,0,0,8.34863067936518,7.97039468826982,0,0,0.631016438832513,0,0,0,0,0,0,0,0,2.89189184779626,0.425820255624806,2.31485284767432,2.28041743095006,0.164970122972535,0,0.728341908464944,0.906970670894253,1.13163047853539,2.36241514304618,1.84461088766356,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0,1.24858172321449,0.658196082408484,0.304464949114599,0,0,0,0.49465875882444,0,0.0603129249281559,0,0.164140899745061,0.291480836629851,7.6024373824309,0,0.412773735926445,0.555583582109135,0,0,0,0,0,0,0,0.474503990371703,1.62655573701479,0.972048067396211,0.836353184057875,0.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| ||
|EntrezGene=246316 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8K4Z0 | |||
|association_with_transcript=26bp_to_ENSMUST00000113928_5end | |||
|description=CAGE_peak_4_at_Lgi2_5end | |||
|id=chr5:52957429..52957457,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.20e-13!71;UBERON:0003075!1.20e-13!71;UBERON:0007284!1.20e-13!71;UBERON:0000033!1.25e-13!63;UBERON:0001049!1.30e-11!52;UBERON:0005068!1.30e-11!52;UBERON:0006241!1.30e-11!52;UBERON:0007135!1.30e-11!52;UBERON:0000955!3.17e-11!50;UBERON:0006238!3.17e-11!50;UBERON:0003056!7.74e-11!49;UBERON:0002616!1.11e-10!49;UBERON:0001017!1.09e-08!73;UBERON:0005743!1.09e-08!73;UBERON:0002021!1.31e-08!10;UBERON:0000411!1.31e-08!10;UBERON:0001950!1.31e-08!10;UBERON:0002020!1.63e-08!34;UBERON:0004121!1.77e-08!102;UBERON:0000924!1.77e-08!102;UBERON:0006601!1.77e-08!102;UBERON:0000073!5.95e-08!75;UBERON:0001016!5.95e-08!75;UBERON:0003080!7.14e-08!40;UBERON:0002780!2.34e-07!39;UBERON:0001890!2.34e-07!39;UBERON:0006240!2.34e-07!39;UBERON:0007811!2.40e-07!86;UBERON:0000153!9.95e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.28e-23,54;UBERON:0002346,6.50e-23,64;UBERON:0003075,6.50e-23,64;UBERON:0007284,6.50e-23,64;UBERON:0001049,5.75e-21,52;UBERON:0005068,5.75e-21,52;UBERON:0006241,5.75e-21,52;UBERON:0007135,5.75e-21,52;UBERON:0000955,3.31e-20,47;UBERON:0006238,3.31e-20,47;UBERON:0002021,3.61e-19,10;UBERON:0000411,3.61e-19,10;UBERON:0001950,3.61e-19,10;UBERON:0010371,5.00e-19,73;UBERON:0002616,5.97e-19,46;UBERON:0001017,4.03e-18,73;UBERON:0003056,7.29e-18,49;UBERON:0004121,1.97e-17,95;UBERON:0000924,1.97e-17,95;UBERON:0006601,1.97e-17,95;UBERON:0001016,2.05e-17,75;UBERON:0003080,1.25e-14,40;UBERON:0010314,2.25e-14,92;UBERON:0002020,3.31e-14,34;UBERON:0003528,8.64e-14,29;UBERON:0002791,8.64e-14,29;UBERON:0001893,8.64e-14,29;UBERON:0002780,1.95e-13,39;UBERON:0001890,1.95e-13,39;UBERON:0006240,1.95e-13,39;UBERON:0002619,2.79e-12,17;UBERON:0000956,2.14e-11,21;UBERON:0001869,2.14e-11,21;UBERON:0000203,2.14e-11,21;UBERON:0002950,6.23e-08,4;UBERON:0001891,6.23e-08,4;UBERON:0009616,6.23e-08,4;UBERON:0010286,6.23e-08,4;UBERON:0003076,3.64e-07,12;UBERON:0003057,3.64e-07,12;UBERON:0000025,6.17e-07,114 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.85960031981627,0.515672092277442,0,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0,1.14260393761521,2.65042249141936,0,0,0,3.30347642998166,3.19218345212969,2.76491759861238,0.659431438650969,0.457438218012048,0,4.4669279840221,2.8138130501584,3.66715794664344,0.589257170947335,0.854230084794618,0.559198337475902,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0,0,0.867426633830679,0,1.15307748628029,0.150722640552623,0.23517741427141,0.251333182659351,0,0.289198713839823,0,0.161766849947409,0,0,0,7.31951992528868,5.02672096352292,0,0,0,0,4.19413790333504,2.28750301409313,0.879580464790051,6.08385120672968,5.62574006126727,4.1557608911912,3.40706652442291,1.01839363850316,0.248813941220186,0,0.210441855886474,0.390361328888111,0.459804208866946,1.62055916824814,1.20563854268572,1.49680298132921,1.66547836370305,0.749613796477831,1.81092359517311,0,0,0.527853372491847,0.657587197282725,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.116765342367169,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0.134206418760372,2.10289948564127,0.308713837137853,0,0.264450566663544,0.853153002140936,0.696710015581316,0.257734922644187,0.605050573870028,0.444756087689741,0.951128130562796,0,0.494096864172033,0,0.795825888164603,0.19496408711912,1.79763881730844,0.216138049874694,0,0.569003702859245,0.571242563048644,1.1270773567308,0.610953983535943,0.193952487167626,0.280543279561274,0.505892296994058,0.147610147979602,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,1.24815069245824,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0.509235257325564,0,0,0.238043640886014,0,0.157635144106191,0.44292937929755,0.159454768657487,0,0,0.433947175744535,0,0,0,0,8.34863067936518,7.97039468826982,0,0,0.631016438832513,0,0,0,0,0,0,0,0,2.89189184779626,0.425820255624806,2.31485284767432,2.28041743095006,0.164970122972535,0,0.728341908464944,0.906970670894253,1.13163047853539,2.36241514304618,1.84461088766356,0.258428293168221,0.363533729477506,0.712994756769443,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0,1.24858172321449,0.658196082408484,0.304464949114599,0,0,0,0.49465875882444,0,0.0603129249281559,0,0.164140899745061,0.291480836629851,7.6024373824309,0,0.412773735926445,0.555583582109135,0,0,0,0,0,0,0,0.474503990371703,1.62655573701479,0.972048067396211,0.836353184057875,0.436725127492355,0.269728692769641,0.495920734352016,0,0,0,0,0.149516546043979,0.330916980914195,1.16670713006429,1.29159823477731,0.337912250981556,0.469428954583016,0.781226309063701,0.524296722128554,0,0,0,0.202725215290164,0.102710957164827,0.51968329191118,0,0,0.240390899039938,0,0.201932899896295,0.304827226619999,0.201652370273681,0.0974578807397524,0,0,0,0,0,0,0,0.375364950902364,0,0.214368379079066,0,6.7770221114048,5.06357760157895,5.72895513439397,11.3423100346834,8.22099023724771,2.2661816921691,11.4753825039407,6.75481804836331,5.43770890781046,5.69536342927002,0,0.399024873401031,0.341467211508268,0.729320151204882,0.209613162627982,0.183843508450014,0.888986911206461,0.412070114477788,0.320919209591815,0.758091635291392,0.760437899670719,0.377252682772152,0.37456602987953,0.128050304809739,0.459483751644906,0,0.347652977834566,0,0,0.147198920134397,0.342869252385415,0.354951612318675,0,0.581385666529314,0.282328141245992,0.25384382367503,0.914639864363863,0.263069711437843,0.407412341537585,1.12228454331548,0.355905054372522,0.394017929502254,0.409231043169689,0.619747364743864,0.385813221962283,0.999242311751784,0.701794825336225,0.429742108096597,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p4@Lgi2 | |||
}} |
Revision as of 07:44, 14 September 2013
Short description: | p4@Lgi2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lgi2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 26bp_to_ENSMUST00000113928_5end |
EntrezGene: | Lgi2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.