FFCP PHASE1:Mm9::chr6:113421509..113421534,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=171095|HGNC=|MCL_coexpression_id=24|UniProt=E9QN10,D3Z7I4|association_with_transcript=8bp_to_ENSMUST00000113061,ENSMUST00000113062_5end|description=CAGE_peak_2_at_Il17rc_5end|id=chr6:113421509..113421534,+|ontology_enrichment_celltype=CL:0000066!2.01e-09!25;CL:0000223!1.28e-08!20;CL:0002076!2.43e-07!15|ontology_enrichment_celltype_v019_2=CL:0000066,3.16e-10,25;CL:0000223,1.37e-09,20;CL:0002563,5.64e-08,9;CL:0002251,5.64e-08,9;CL:0002076,5.68e-08,15;CL:0002453,4.20e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.70e-10!15;UBERON:0001242!2.58e-09!13;UBERON:0000060!2.58e-09!13;UBERON:0001262!2.58e-09!13;UBERON:0004786!2.58e-09!13;UBERON:0000160!4.93e-08!43;UBERON:0005409!1.31e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.04e-12,15;UBERON:0001242,3.09e-11,13;UBERON:0001262,3.09e-11,13;UBERON:0004786,3.09e-11,13;UBERON:0000160,6.39e-11,31;UBERON:0005409,1.57e-09,47;UBERON:0001007,1.90e-08,116;UBERON:0001555,1.90e-08,116;UBERON:0007026,1.90e-08,116;UBERON:0003350,5.64e-08,9;UBERON:0004808,5.64e-08,9;UBERON:0001277,5.64e-08,9;UBERON:0004119,5.81e-08,118;UBERON:0000925,5.81e-08,118;UBERON:0006595,5.81e-08,118;UBERON:0004921,1.40e-07,114|phase1_expression=0.80074423552397,29.3139342417063,25.9349566452036,70.4741612344914,81.1451082513082,13.0945832091274,9.57811826441655,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0.198581902401771,0,11.5194544411253,13.9939661450974,25.8404383851759,33.1686737042488,20.6852383378453,34.2042155021473,39.8207605020691,20.6209374909433,0,0,0,4.91047753577167,5.31950865147176,5.10423390655923,0,0,0,0,0,0,2.39203954153597,3.24406179902447,0.917733760808408,17.9950009200049,14.171635164729,29.8773208518882,38.3026901176338,11.198913730029,8.62515386189829,0,0,0,2.82985379639542,2.86533439938757,3.6097046459421,0,0,0,6.09920157724438,13.3394219416671,2.6996991518442,0.988866362566974,2.1314403448383,2.69640099466564,5.76327457982332,0,0.135005938331691,0.420649922702764,0.285650984403804,0.662605622854841,0,0,0,1.10115880999389,0.255374676170375,0,0,0,0.52091337055676,0.558365998002762,1.12552522006336,0.916789486660861,0.589257170947335,0.142371680799103,0,0.302904773332736,1.51143120213571,1.15945795480671,3.44169550792555,2.03991400112325,3.77792234146472,2.59910566979068,1.79210754838934,1.26399978118577,6.98764322570037,4.93593408745451,8.12681021373782,0.14084341977668,3.84979432242953,7.64415719119937,14.2213340630666,0.649473123033642,0.506719730950197,1.51657333504435,4.22480354960522,0.258937883647172,1.03909497345377,0.346970653532272,0.304465478312141,0.461230994512117,0.753613202763113,0.470354828542819,1.50799909595611,0,1.44599356919912,0,0.647067399789637,0.662524555381181,0,3.72783522436244,0.292780797011547,0.209446706813455,15.8383374229327,0,0,0,0.599162557619291,0,0,1.04294592115366,0.255715457330331,0,0.324482526135515,1.42575109390443,0.746441823660558,1.0108910337347,0.631325567659422,0,0.229902104433473,0.180062129805349,0.452114453507145,0.408218994907967,0.12811372028485,0.468508622798644,0.517406741478031,0,0.378212160335639,0,0.876782929710299,1.94633074457919,1.0447564995665,1.4404749548556,0.398068533636986,0,0,0,0,0,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,1.16266972375204,1.87791380979733,0.583826711835847,0.658239399653922,0.32833492815819,0.243206428637567,0.584799949701329,0.658650345873152,0.939444931322602,0.210289948564127,0.205809224758569,14.8688452342709,5.55346189993443,0.213288250535234,0.232236671860439,0.38660238396628,1.00841762311671,0.889512175379481,0.951128130562796,10.4396393539793,0.658795818896044,1.25667604400135,1.39269530428806,1.55971269695296,6.29173586057955,8.64552199498777,8.96135729644652,0.189667900953082,0.114248512609729,0,0.814605311381257,0.775809948670503,0.771494018793504,0.885311519739602,0.295220295959204,0.941992367048249,0.616985819609003,4.44678940630723,0,0.196558995113203,0.449724224769707,0.202860121388503,0,0,1.43848068725405,0.162135226775035,1.37280706594041,1.43768206527355,1.11642284300551,0.624075346229121,1.51547326768267,1.79397413521912,1.92977408545347,1.47802552133284,0.189491411770485,0.325929952884052,0.509235257325564,0.469380496577004,3.01511263395268,1.90434912708811,2.14647012643579,2.04925687338048,1.10732344824387,1.91345722388985,2.45794972073607,1.20879487306127,1.3018415272336,0,0,1.47529281905711,1.10374698521893,0.321101179975584,0.703270119553219,6.22952792431367,1.51482556322624,1.26203287766503,1.17131623288992,0.430846795465598,0.716906393857656,0.668396022247182,1.41538265394416,0.809621403349789,1.46127928955656,0.395287777946524,0.321321316421807,0.851640511249612,1.42452482933804,0.81443479676788,1.31976098378028,0,1.21390318077491,0.906970670894253,0.377210159511796,1.18120757152309,0.614870295887855,1.03371317267288,2.18120237686503,0.712994756769443,0.316036757935816,1.05418608574999,0,1.36175842301515,0.18006109403131,0.388076051348264,0.42867407006318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| ||
|EntrezGene=171095 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=E9QN10,D3Z7I4 | |||
|association_with_transcript=8bp_to_ENSMUST00000113061,ENSMUST00000113062_5end | |||
|description=CAGE_peak_2_at_Il17rc_5end | |||
|id=chr6:113421509..113421534,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.01e-09!25;CL:0000223!1.28e-08!20;CL:0002076!2.43e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.16e-10,25;CL:0000223,1.37e-09,20;CL:0002563,5.64e-08,9;CL:0002251,5.64e-08,9;CL:0002076,5.68e-08,15;CL:0002453,4.20e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.70e-10!15;UBERON:0001242!2.58e-09!13;UBERON:0000060!2.58e-09!13;UBERON:0001262!2.58e-09!13;UBERON:0004786!2.58e-09!13;UBERON:0000160!4.93e-08!43;UBERON:0005409!1.31e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.04e-12,15;UBERON:0001242,3.09e-11,13;UBERON:0001262,3.09e-11,13;UBERON:0004786,3.09e-11,13;UBERON:0000160,6.39e-11,31;UBERON:0005409,1.57e-09,47;UBERON:0001007,1.90e-08,116;UBERON:0001555,1.90e-08,116;UBERON:0007026,1.90e-08,116;UBERON:0003350,5.64e-08,9;UBERON:0004808,5.64e-08,9;UBERON:0001277,5.64e-08,9;UBERON:0004119,5.81e-08,118;UBERON:0000925,5.81e-08,118;UBERON:0006595,5.81e-08,118;UBERON:0004921,1.40e-07,114 | |||
|phase1_expression=0.80074423552397,29.3139342417063,25.9349566452036,70.4741612344914,81.1451082513082,13.0945832091274,9.57811826441655,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0.198581902401771,0,11.5194544411253,13.9939661450974,25.8404383851759,33.1686737042488,20.6852383378453,34.2042155021473,39.8207605020691,20.6209374909433,0,0,0,4.91047753577167,5.31950865147176,5.10423390655923,0,0,0,0,0,0,2.39203954153597,3.24406179902447,0.917733760808408,17.9950009200049,14.171635164729,29.8773208518882,38.3026901176338,11.198913730029,8.62515386189829,0,0,0,2.82985379639542,2.86533439938757,3.6097046459421,0,0,0,6.09920157724438,13.3394219416671,2.6996991518442,0.988866362566974,2.1314403448383,2.69640099466564,5.76327457982332,0,0.135005938331691,0.420649922702764,0.285650984403804,0.662605622854841,0,0,0,1.10115880999389,0.255374676170375,0,0,0,0.52091337055676,0.558365998002762,1.12552522006336,0.916789486660861,0.589257170947335,0.142371680799103,0,0.302904773332736,1.51143120213571,1.15945795480671,3.44169550792555,2.03991400112325,3.77792234146472,2.59910566979068,1.79210754838934,1.26399978118577,6.98764322570037,4.93593408745451,8.12681021373782,0.14084341977668,3.84979432242953,7.64415719119937,14.2213340630666,0.649473123033642,0.506719730950197,1.51657333504435,4.22480354960522,0.258937883647172,1.03909497345377,0.346970653532272,0.304465478312141,0.461230994512117,0.753613202763113,0.470354828542819,1.50799909595611,0,1.44599356919912,0,0.647067399789637,0.662524555381181,0,3.72783522436244,0.292780797011547,0.209446706813455,15.8383374229327,0,0,0,0.599162557619291,0,0,1.04294592115366,0.255715457330331,0,0.324482526135515,1.42575109390443,0.746441823660558,1.0108910337347,0.631325567659422,0,0.229902104433473,0.180062129805349,0.452114453507145,0.408218994907967,0.12811372028485,0.468508622798644,0.517406741478031,0,0.378212160335639,0,0.876782929710299,1.94633074457919,1.0447564995665,1.4404749548556,0.398068533636986,0,0,0,0,0,0.36012412292203,0.23674473558521,0.196764231747404,0.462801338662135,1.16266972375204,1.87791380979733,0.583826711835847,0.658239399653922,0.32833492815819,0.243206428637567,0.584799949701329,0.658650345873152,0.939444931322602,0.210289948564127,0.205809224758569,14.8688452342709,5.55346189993443,0.213288250535234,0.232236671860439,0.38660238396628,1.00841762311671,0.889512175379481,0.951128130562796,10.4396393539793,0.658795818896044,1.25667604400135,1.39269530428806,1.55971269695296,6.29173586057955,8.64552199498777,8.96135729644652,0.189667900953082,0.114248512609729,0,0.814605311381257,0.775809948670503,0.771494018793504,0.885311519739602,0.295220295959204,0.941992367048249,0.616985819609003,4.44678940630723,0,0.196558995113203,0.449724224769707,0.202860121388503,0,0,1.43848068725405,0.162135226775035,1.37280706594041,1.43768206527355,1.11642284300551,0.624075346229121,1.51547326768267,1.79397413521912,1.92977408545347,1.47802552133284,0.189491411770485,0.325929952884052,0.509235257325564,0.469380496577004,3.01511263395268,1.90434912708811,2.14647012643579,2.04925687338048,1.10732344824387,1.91345722388985,2.45794972073607,1.20879487306127,1.3018415272336,0,0,1.47529281905711,1.10374698521893,0.321101179975584,0.703270119553219,6.22952792431367,1.51482556322624,1.26203287766503,1.17131623288992,0.430846795465598,0.716906393857656,0.668396022247182,1.41538265394416,0.809621403349789,1.46127928955656,0.395287777946524,0.321321316421807,0.851640511249612,1.42452482933804,0.81443479676788,1.31976098378028,0,1.21390318077491,0.906970670894253,0.377210159511796,1.18120757152309,0.614870295887855,1.03371317267288,2.18120237686503,0.712994756769443,0.316036757935816,1.05418608574999,0,1.36175842301515,0.18006109403131,0.388076051348264,0.428674070063185,0.709360934569094,1.60531935841864,1.48094118541909,0.608929898229199,0.469343416127421,0.42366414172764,1.10264199027481,2.80306630000516,1.13025098687134,1.80938774784468,2.50681922406587,2.1338316966858,2.33184669303881,0.556275906031529,0,0.412773735926445,0.740778109478847,0.188368457004691,0.410082683163076,0,0,0,0.138199973804424,4.77335309007557,0,1.21991680276109,0.86404272657441,1.25452977608681,2.18362563746178,2.29269388854195,2.39695021603474,5.75863072364865,8.03612834409116,0,0,0.299033092087958,0.66183396182839,1.16670713006429,0.645799117388655,0.844780627453891,0.469428954583016,1.0416350787516,0.419437377702843,0.241584120826006,0,0.316011120628178,0.608175645870493,0.308132871494482,0.25984164595559,0.358053391334963,0,0.240390899039938,0.147689527174577,0,0.0762068066549998,0.201652370273681,0.0974578807397524,0,0.116876902181569,1.36038230169127,1.10992976687032,0.179427713218951,0.503653849092235,2.31827512838629,2.62755465631655,1.28206136987086,2.14368379079066,1.50471631210609,0,0,0,0,0,0,0.675022500231806,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0.486213434136588,0.209613162627982,1.2869045591501,1.11123363900808,1.85431551515005,0.962757628775446,1.26348605881899,0.2534792998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| |||
|short_description=p2@Il17rc | |||
}} | |||
Revision as of 08:32, 14 September 2013
| Short description: | p2@Il17rc |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Il17rc_5end |
| Coexpression cluster: | MCL_coexpression_mm9:24 |
| Association with transcript: | 8bp_to_ENSMUST00000113061, ENSMUST00000113062_5end |
| EntrezGene: | Il17rc |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 3.16e-10 | 25 |
| endodermal cell | 1.37e-09 | 20 |
| intestinal epithelial cell | 5.64e-08 | 9 |
| epithelial cell of alimentary canal | 5.64e-08 | 9 |
| endo-epithelial cell | 5.68e-08 | 15 |
| oligodendrocyte precursor cell | 4.20e-07 | 8 |
| Ontology term | p-value | n |
|---|---|---|
| mucosa | 1.04e-12 | 15 |
| intestinal mucosa | 3.09e-11 | 13 |
| wall of intestine | 3.09e-11 | 13 |
| gastrointestinal system mucosa | 3.09e-11 | 13 |
| intestine | 6.39e-11 | 31 |
| gastrointestinal system | 1.57e-09 | 47 |
| digestive system | 1.90e-08 | 116 |
| digestive tract | 1.90e-08 | 116 |
| primitive gut | 1.90e-08 | 116 |
| epithelium of mucosa | 5.64e-08 | 9 |
| gastrointestinal system epithelium | 5.64e-08 | 9 |
| intestinal epithelium | 5.64e-08 | 9 |
| endoderm-derived structure | 5.81e-08 | 118 |
| endoderm | 5.81e-08 | 118 |
| presumptive endoderm | 5.81e-08 | 118 |
| subdivision of digestive tract | 1.40e-07 | 114 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
