FFCP PHASE1:Mm9::chr6:117857120..117857171,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=98758|HGNC=|MCL_coexpression_id=0|UniProt=Q9Z2X1|association_with_transcript=320bp_to_ENSMUST00000163168,ENSMUST00000170346,NM_001166430,NM_001166431,uc009dlf.2,uc012eqy.1_5end|description=CAGE_peak_7_at_Hnrnpf_5end|id=chr6:117857120..117857171,+|ontology_enrichment_celltype=CL:0000988!9.50e-10!32;CL:0002032!9.50e-10!32;CL:0000037!9.50e-10!32;CL:0000566!9.50e-10!32;CL:0000837!9.50e-10!32;CL:0000219!1.69e-09!54;CL:0000738!9.70e-09!17;CL:0002087!9.70e-09!17;CL:0002320!1.26e-08!46;CL:0000134!1.26e-08!46;CL:0000838!1.30e-08!12;CL:0000084!4.75e-08!11;CL:0000827!4.75e-08!11;CL:0000542!6.90e-08!13;CL:0000051!6.90e-08!13;CL:0000791!4.58e-07!9;CL:0000789!4.58e-07!9;CL:0002420!4.58e-07!9;CL:0002419!4.58e-07!9;CL:0000790!4.58e-07!9;CL:0002031!6.23e-07!25;CL:0000063!8.61e-07!66|ontology_enrichment_celltype_v019_2=CL:0000988,8.50e-10,32;CL:0002032,8.50e-10,32;CL:0000037,8.50e-10,32;CL:0000837,8.50e-10,32;CL:0000219,3.27e-09,54;CL:0000738,8.83e-09,17;CL:0002087,8.83e-09,17;CL:0000838,1.18e-08,12;CL:0002320,2.49e-08,46;CL:0000134,2.49e-08,46;CL:0000084,4.36e-08,11;CL:0000827,4.36e-08,11;CL:0000542,6.36e-08,13;CL:0000051,6.36e-08,13;CL:0000791,4.26e-07,9;CL:0000789,4.26e-07,9;CL:0002420,4.26e-07,9;CL:0002419,4.26e-07,9;CL:0000790,4.26e-07,9;CL:0002031,5.78e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!1.10e-12!128;UBERON:0001555!1.10e-12!128;UBERON:0007026!1.10e-12!128;UBERON:0004119!1.99e-12!130;UBERON:0000925!1.99e-12!130;UBERON:0006595!1.99e-12!130;UBERON:0004921!3.22e-12!126;UBERON:0004185!3.22e-12!126;UBERON:0001041!3.86e-10!92;UBERON:0002405!4.47e-10!70;UBERON:0000077!4.80e-10!97;UBERON:0005911!7.67e-09!69;UBERON:0002384!1.26e-08!46;UBERON:0002193!1.74e-08!48;UBERON:0002390!1.18e-07!45;UBERON:0003061!1.18e-07!45;UBERON:0000065!2.52e-07!41;UBERON:0001004!3.66e-07!42;UBERON:0005057!4.32e-07!51;UBERON:0003929!7.79e-07!55;UBERON:0000926!9.90e-07!193;UBERON:0004120!9.90e-07!193;UBERON:0006603!9.90e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.65e-14,116;UBERON:0001555,4.65e-14,116;UBERON:0007026,4.65e-14,116;UBERON:0004119,9.39e-14,118;UBERON:0000925,9.39e-14,118;UBERON:0006595,9.39e-14,118;UBERON:0004921,1.41e-13,114;UBERON:0001041,8.59e-12,80;UBERON:0005911,3.99e-09,69;UBERON:0002193,1.54e-08,48;UBERON:0002405,1.54e-08,48;UBERON:0002384,2.49e-08,46;UBERON:0002390,1.06e-07,45;UBERON:0003061,1.06e-07,45;UBERON:0000065,1.29e-07,41;UBERON:0001004,1.90e-07,42;UBERON:0003929,4.30e-07,55|phase1_expression=3.04282809499109,2.09385244583617,1.81999695755814,1.81478526784098,0.500895729946347,6.04365378882803,8.1764424208434,24.2751848070163,22.80777298857,22.9383235795554,19.5188483777076,16.113976117058,27.2209160590617,28.4116307861742,7.66152452176024,4.656931149966,0.699561878128147,6.46697438984387,8.91243818437302,8.06340338416257,80.8761689336674,12.7092417537133,11.2315909329742,4.95976510659561,5.50582274561208,2.8711598205751,1.29228598847722,5.38678081714723,5.51067916423484,3.02436155711917,3.76941868114018,1.27006134691926,0.61506478758457,0,9.24325183204079,10.6390173029435,10.6168065256432,1.67412652294763,2.3440060335714,3.14114246384279,4.1176204162171,0,0.485510353031154,2.51793635951155,2.83855407414641,2.56965453026354,1.56478268869608,3.92445281484804,4.17403747195497,5.24960727500565,7.13930750289349,12.9377307928474,16.9460432118314,21.7608642603403,31.9289109185341,3.8588915405392,1.71920063963254,4.12537673821954,0.606949382578793,0,1.90149421051854,0.677689064138264,0.889294796111139,2.2497492932035,0.988866362566974,0.7104801149461,5.69240209984969,9.60545763303886,0.518448061542388,0.540023753326763,0.210324961351382,1.42825492201902,1.54607978666129,0.61245399607477,0.766763768145891,0,0,0.127687338085188,0.307213066512487,1.18697658957174,0.640413505216868,0,0.837548997004143,0.56276261003168,0.61119299110724,2.06240009831567,1.13897344639282,0.559198337475902,4.16494063332512,3.47629176491213,4.05810284182349,3.44169550792555,13.599426674155,4.31762553310254,9.74664626171504,7.16843019355737,13.7635531729117,5.11290967734173,5.19572009205738,4.94675404314476,2.95771181531029,0,0,0,3.68034769719064,3.04031838570118,3.0331466700887,17.127581957859,13.7237078333001,0.593768556259299,1.04091196059682,2.13125834818499,2.07553947530453,1.20578112442098,1.88141931417128,1.25666591329675,5.6854842578906,2.60278842455841,3.5384422077995,4.36770494858005,3.97514733228708,3.39412677194655,9.31958806090611,0,0,3.57639877292028,21.2072770375479,19.7967901227825,17.4086211090099,0.149790639404823,0.457500602818626,1.00523481690292,0.347648640384553,0.767146371990992,1.45451631191692,0.648965052271031,2.54598409625791,4.47865094196335,2.77995034277042,1.47309299120532,1.30120442962704,0.919608417733892,1.44049703844279,1.9591626318643,3.12967896096108,2.8185018462667,1.49922759295566,1.03481348295606,0.646703978798527,0.756424320671277,1.05570674498369,2.19195732427575,3.05851974148158,7.3132954969655,7.819721183501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| ||
|EntrezGene=98758 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q9Z2X1 | |||
|association_with_transcript=320bp_to_ENSMUST00000163168,ENSMUST00000170346,NM_001166430,NM_001166431,uc009dlf.2,uc012eqy.1_5end | |||
|description=CAGE_peak_7_at_Hnrnpf_5end | |||
|id=chr6:117857120..117857171,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.50e-10!32;CL:0002032!9.50e-10!32;CL:0000037!9.50e-10!32;CL:0000566!9.50e-10!32;CL:0000837!9.50e-10!32;CL:0000219!1.69e-09!54;CL:0000738!9.70e-09!17;CL:0002087!9.70e-09!17;CL:0002320!1.26e-08!46;CL:0000134!1.26e-08!46;CL:0000838!1.30e-08!12;CL:0000084!4.75e-08!11;CL:0000827!4.75e-08!11;CL:0000542!6.90e-08!13;CL:0000051!6.90e-08!13;CL:0000791!4.58e-07!9;CL:0000789!4.58e-07!9;CL:0002420!4.58e-07!9;CL:0002419!4.58e-07!9;CL:0000790!4.58e-07!9;CL:0002031!6.23e-07!25;CL:0000063!8.61e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.50e-10,32;CL:0002032,8.50e-10,32;CL:0000037,8.50e-10,32;CL:0000837,8.50e-10,32;CL:0000219,3.27e-09,54;CL:0000738,8.83e-09,17;CL:0002087,8.83e-09,17;CL:0000838,1.18e-08,12;CL:0002320,2.49e-08,46;CL:0000134,2.49e-08,46;CL:0000084,4.36e-08,11;CL:0000827,4.36e-08,11;CL:0000542,6.36e-08,13;CL:0000051,6.36e-08,13;CL:0000791,4.26e-07,9;CL:0000789,4.26e-07,9;CL:0002420,4.26e-07,9;CL:0002419,4.26e-07,9;CL:0000790,4.26e-07,9;CL:0002031,5.78e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.10e-12!128;UBERON:0001555!1.10e-12!128;UBERON:0007026!1.10e-12!128;UBERON:0004119!1.99e-12!130;UBERON:0000925!1.99e-12!130;UBERON:0006595!1.99e-12!130;UBERON:0004921!3.22e-12!126;UBERON:0004185!3.22e-12!126;UBERON:0001041!3.86e-10!92;UBERON:0002405!4.47e-10!70;UBERON:0000077!4.80e-10!97;UBERON:0005911!7.67e-09!69;UBERON:0002384!1.26e-08!46;UBERON:0002193!1.74e-08!48;UBERON:0002390!1.18e-07!45;UBERON:0003061!1.18e-07!45;UBERON:0000065!2.52e-07!41;UBERON:0001004!3.66e-07!42;UBERON:0005057!4.32e-07!51;UBERON:0003929!7.79e-07!55;UBERON:0000926!9.90e-07!193;UBERON:0004120!9.90e-07!193;UBERON:0006603!9.90e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.65e-14,116;UBERON:0001555,4.65e-14,116;UBERON:0007026,4.65e-14,116;UBERON:0004119,9.39e-14,118;UBERON:0000925,9.39e-14,118;UBERON:0006595,9.39e-14,118;UBERON:0004921,1.41e-13,114;UBERON:0001041,8.59e-12,80;UBERON:0005911,3.99e-09,69;UBERON:0002193,1.54e-08,48;UBERON:0002405,1.54e-08,48;UBERON:0002384,2.49e-08,46;UBERON:0002390,1.06e-07,45;UBERON:0003061,1.06e-07,45;UBERON:0000065,1.29e-07,41;UBERON:0001004,1.90e-07,42;UBERON:0003929,4.30e-07,55 | |||
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| |||
|short_description=p7@Hnrnpf | |||
}} |
Revision as of 08:39, 14 September 2013
Short description: | p7@Hnrnpf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Hnrnpf_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 320bp_to_ENSMUST00000163168, ENSMUST00000170346, NM_001166430, NM_001166431, uc009dlf.2, uc012eqy.1_5end |
EntrezGene: | Hnrnpf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.50e-10 | 32 |
hematopoietic oligopotent progenitor cell | 8.50e-10 | 32 |
hematopoietic stem cell | 8.50e-10 | 32 |
hematopoietic multipotent progenitor cell | 8.50e-10 | 32 |
motile cell | 3.27e-09 | 54 |
leukocyte | 8.83e-09 | 17 |
nongranular leukocyte | 8.83e-09 | 17 |
lymphoid lineage restricted progenitor cell | 1.18e-08 | 12 |
connective tissue cell | 2.49e-08 | 46 |
mesenchymal cell | 2.49e-08 | 46 |
T cell | 4.36e-08 | 11 |
pro-T cell | 4.36e-08 | 11 |
lymphocyte | 6.36e-08 | 13 |
common lymphoid progenitor | 6.36e-08 | 13 |
mature alpha-beta T cell | 4.26e-07 | 9 |
alpha-beta T cell | 4.26e-07 | 9 |
immature T cell | 4.26e-07 | 9 |
mature T cell | 4.26e-07 | 9 |
immature alpha-beta T cell | 4.26e-07 | 9 |
hematopoietic lineage restricted progenitor cell | 5.78e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
digestive system | 4.65e-14 | 116 |
digestive tract | 4.65e-14 | 116 |
primitive gut | 4.65e-14 | 116 |
endoderm-derived structure | 9.39e-14 | 118 |
endoderm | 9.39e-14 | 118 |
presumptive endoderm | 9.39e-14 | 118 |
subdivision of digestive tract | 1.41e-13 | 114 |
foregut | 8.59e-12 | 80 |
endo-epithelium | 3.99e-09 | 69 |
hemolymphoid system | 1.54e-08 | 48 |
immune system | 1.54e-08 | 48 |
connective tissue | 2.49e-08 | 46 |
hematopoietic system | 1.06e-07 | 45 |
blood island | 1.06e-07 | 45 |
respiratory tract | 1.29e-07 | 41 |
respiratory system | 1.90e-07 | 42 |
gut epithelium | 4.30e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.