FFCP PHASE1:Hg19::chrX:55115486..55115496,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=203569|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=31804|TSSclassifier=S|UniProt=Q7Z2X7|association_with_transcript=0bp_to_NM_207339,uc004duf.1_5end|coexpression_cluster_id=C312|description=CAGE_peak_3_at_PAGE2_5end|id=chrX:55115486..55115496,+|ontology_enrichment_celltype=CL:1000415!2.15e-07!2|ontology_enrichment_celltype_v019=CL:1000415;3.11e-21;2|ontology_enrichment_celltype_v019_2=CL:1000415,3.11e-21,2|ontology_enrichment_development_v019=UBERON:0007123;3.35e-09;5|ontology_enrichment_disease=DOID:4231!4.98e-07!2;DOID:1907!4.98e-07!2|ontology_enrichment_disease_v019=DOID:5093;3.10e-11;4!DOID:1612;3.10e-11;4|ontology_enrichment_disease_v019_2=DOID:5093,3.10e-11,4;DOID:1612,3.10e-11,4|ontology_enrichment_uberon=UBERON:0001282!1.82e-13!1;UBERON:0009842!1.82e-13!1;UBERON:0003704!1.82e-13!1;UBERON:0001171!1.82e-13!1;UBERON:0001172!1.82e-13!1;UBERON:0007195!2.32e-13!1;UBERON:0002294!7.30e-08!7;UBERON:0001173!7.30e-08!7;UBERON:0004912!7.30e-08!7;UBERON:0000473!8.60e-07!8|ontology_enrichment_uberon_v019=UBERON:0001282;9.91e-41;1!UBERON:0009842;9.91e-41;1!UBERON:0003704;9.91e-41;1!UBERON:0001171;9.91e-41;1!UBERON:0001172;9.91e-41;1!UBERON:0007195;2.70e-40;1!UBERON:0002294;1.02e-23;7!UBERON:0001173;1.02e-23;7!UBERON:0002110;1.22e-14;3!UBERON:0001280;1.40e-14;3!UBERON:0004647;1.40e-14;3!UBERON:0002394;2.80e-11;4!UBERON:0003928;2.80e-11;4!UBERON:0002046;3.35e-09;5!UBERON:0002423;2.13e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0001282,9.91e-41,1;UBERON:0009842,9.91e-41,1;UBERON:0003704,9.91e-41,1;UBERON:0001171,9.91e-41,1;UBERON:0001172,9.91e-41,1;UBERON:0007195,2.21e-40,1;UBERON:0002294,1.03e-18,9;UBERON:0001173,1.03e-18,9;UBERON:0004912,1.03e-18,9;UBERON:0002110,1.22e-14,3;UBERON:0006242,1.22e-14,3;UBERON:0001280,1.40e-14,3;UBERON:0004647,1.40e-14,3;UBERON:0005171,1.40e-14,3;UBERON:0002046,3.49e-09,5;UBERON:0004117,3.49e-09,5;UBERON:0007689,3.49e-09,5;UBERON:0007123,3.49e-09,5;UBERON:0003091,3.49e-09,5;UBERON:0002394,5.92e-08,6;UBERON:0003928,5.92e-08,6;UBERON:0003929,2.08e-07,54;UBERON:0009497,2.14e-07,25;UBERON:0000015,2.14e-07,25;UBERON:0002423,2.14e-07,25;UBERON:0006235,2.14e-07,25;UBERON:0004161,2.14e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,2.86470537193757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41826167541004,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.61905843018405,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757786982182394,0.267964130156178,0,0,0,0,0,0,1.00918676322552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@PAGE2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=203569 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31804 | |||
|TSSclassifier=S | |||
|UniProt=Q7Z2X7 | |||
|association_with_transcript=0bp_to_NM_207339,uc004duf.1_5end | |||
|coexpression_cluster_id=C312 | |||
|description=CAGE_peak_3_at_PAGE2_5end | |||
|id=chrX:55115486..55115496,+ | |||
|ontology_enrichment_celltype=CL:1000415!2.15e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1000415;3.11e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,3.11e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.35e-09;5 | |||
|ontology_enrichment_disease=DOID:4231!4.98e-07!2;DOID:1907!4.98e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:5093;3.10e-11;4!DOID:1612;3.10e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.10e-11,4;DOID:1612,3.10e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0001282!1.82e-13!1;UBERON:0009842!1.82e-13!1;UBERON:0003704!1.82e-13!1;UBERON:0001171!1.82e-13!1;UBERON:0001172!1.82e-13!1;UBERON:0007195!2.32e-13!1;UBERON:0002294!7.30e-08!7;UBERON:0001173!7.30e-08!7;UBERON:0004912!7.30e-08!7;UBERON:0000473!8.60e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;9.91e-41;1!UBERON:0009842;9.91e-41;1!UBERON:0003704;9.91e-41;1!UBERON:0001171;9.91e-41;1!UBERON:0001172;9.91e-41;1!UBERON:0007195;2.70e-40;1!UBERON:0002294;1.02e-23;7!UBERON:0001173;1.02e-23;7!UBERON:0002110;1.22e-14;3!UBERON:0001280;1.40e-14;3!UBERON:0004647;1.40e-14;3!UBERON:0002394;2.80e-11;4!UBERON:0003928;2.80e-11;4!UBERON:0002046;3.35e-09;5!UBERON:0002423;2.13e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,9.91e-41,1;UBERON:0009842,9.91e-41,1;UBERON:0003704,9.91e-41,1;UBERON:0001171,9.91e-41,1;UBERON:0001172,9.91e-41,1;UBERON:0007195,2.21e-40,1;UBERON:0002294,1.03e-18,9;UBERON:0001173,1.03e-18,9;UBERON:0004912,1.03e-18,9;UBERON:0002110,1.22e-14,3;UBERON:0006242,1.22e-14,3;UBERON:0001280,1.40e-14,3;UBERON:0004647,1.40e-14,3;UBERON:0005171,1.40e-14,3;UBERON:0002046,3.49e-09,5;UBERON:0004117,3.49e-09,5;UBERON:0007689,3.49e-09,5;UBERON:0007123,3.49e-09,5;UBERON:0003091,3.49e-09,5;UBERON:0002394,5.92e-08,6;UBERON:0003928,5.92e-08,6;UBERON:0003929,2.08e-07,54;UBERON:0009497,2.14e-07,25;UBERON:0000015,2.14e-07,25;UBERON:0002423,2.14e-07,25;UBERON:0006235,2.14e-07,25;UBERON:0004161,2.14e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,2.86470537193757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41826167541004,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.61905843018405,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757786982182394,0.267964130156178,0,0,0,0,0,0,1.00918676322552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@PAGE2 | |||
}} |
Revision as of 12:16, 14 September 2013
Short description: | p3@PAGE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PAGE2_5end |
Coexpression cluster: | C312_gall_squamous_small_chronic_thyroid_cholangiocellular_testicular |
Association with transcript: | 0bp_to_NM_207339, uc004duf.1_5end |
EntrezGene: | PAGE2 |
HGNC: | 31804 |
UniProt: | Q7Z2X7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 3.11e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 9.91e-41 | 1 |
acinus | 9.91e-41 | 1 |
intrahepatic bile duct | 9.91e-41 | 1 |
portal lobule | 9.91e-41 | 1 |
hepatic acinus | 9.91e-41 | 1 |
stroma of bone marrow | 2.21e-40 | 1 |
biliary system | 1.03e-18 | 9 |
biliary tree | 1.03e-18 | 9 |
biliary bud | 1.03e-18 | 9 |
gallbladder | 1.22e-14 | 3 |
gall bladder primordium | 1.22e-14 | 3 |
liver parenchyma | 1.40e-14 | 3 |
liver lobule | 1.40e-14 | 3 |
hepatic duct | 1.40e-14 | 3 |
thyroid gland | 3.49e-09 | 5 |
pharyngeal pouch | 3.49e-09 | 5 |
thyroid diverticulum | 3.49e-09 | 5 |
pharyngeal pouch 2 | 3.49e-09 | 5 |
thyroid primordium | 3.49e-09 | 5 |
bile duct | 5.92e-08 | 6 |
digestive system duct | 5.92e-08 | 6 |
gut epithelium | 2.08e-07 | 54 |
epithelium of foregut-midgut junction | 2.14e-07 | 25 |
anatomical boundary | 2.14e-07 | 25 |
hepatobiliary system | 2.14e-07 | 25 |
foregut-midgut junction | 2.14e-07 | 25 |
septum transversum | 2.14e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.10e-11 | 4 |
breast cancer | 3.10e-11 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.