FFCP PHASE1:Mm9::chr7:19912585..19912612,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=366|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:19912585..19912612,-|id=chr7:19912585..19912612,-|ontology_enrichment_celltype=CL:0000063!4.11e-10!66;CL:0000144!1.30e-09!121;CL:0000012!1.30e-09!121;CL:0002563!7.29e-09!9;CL:0002251!7.29e-09!9;CL:0000548!1.98e-08!115;CL:0000004!1.98e-08!115;CL:0000255!1.98e-08!115;CL:0002371!6.84e-08!118;CL:0000049!9.04e-08!19;CL:0000557!1.34e-07!7;CL:0000066!2.37e-07!25;CL:0000219!9.88e-07!54|ontology_enrichment_celltype_v019_2=CL:0002563,3.62e-23,9;CL:0002251,3.62e-23,9;CL:0000239,1.62e-13,6;CL:0000677,1.62e-13,6;CL:0000584,1.62e-13,6;CL:0002076,2.00e-13,15;CL:0000223,1.53e-12,20;CL:0002250,1.45e-11,3;CL:0000075,1.48e-11,7;CL:0000049,7.26e-10,19;CL:0000066,9.89e-10,25;CL:0000557,2.69e-07,7;CL:0000034,8.37e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000485!4.34e-10!11;UBERON:0003350!7.29e-09!9;UBERON:0004808!7.29e-09!9;UBERON:0001277!7.29e-09!9|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.62e-23,9;UBERON:0004808,3.62e-23,9;UBERON:0001277,3.62e-23,9;UBERON:0000485,9.64e-19,11;UBERON:0001242,1.12e-15,13;UBERON:0001262,1.12e-15,13;UBERON:0004786,1.12e-15,13;UBERON:0000344,2.00e-13,15;UBERON:0004923,6.13e-08,24|phase1_expression=0.160148847104794,2.09385244583617,0,1.51232105653415,1.50268718983904,2.01455126294268,1.63528848416868,0.129123323441576,0.281577444303333,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0.57423196411502,0,0,0,0,0,0.635030673459631,1.23012957516914,0,9.24325183204079,2.32728503501889,8.98345167554424,0,0,0,2.35292595212406,0,0,0,0.202753862439029,0,0,0.218025156380447,0.659058548203415,0.388859798148567,0.139986421625363,0,0,0,0,0,0.286533439938757,1.54701627683233,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0.383062014255563,0,0,0,0,0.279182999001381,0,0,0,0,0,0.302904773332736,0.604572480854284,20.5803786978191,2.58127163094416,0,0,0,0.448026887097336,0,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0.506719730950197,0,0,0,0.29688427812965,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.628340120440365,0,2.75574786363617,5.99902730993408,2.03312363316904,0,0,0,0,0.255715457330331,0.41557608911912,0.486723789203273,0,0,0,0,0,0,0,0,0.204109497453984,0.2562274405697,0,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,1.40442637462647,1.54408744268829,1.13665399758237,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0.203651327845314,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0.491589944147214,0,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0.177340233642274,0,0,0,0,0,0,1.81374878235628,0,0.241251699712623,0,0,0,0.18542530201051,0,0,0,0,0,0,3.56954702987096,3.21888340344413,1.52019971184866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.717710852875806,0.167884616364078,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.515559547031063,2.74033007908257,0.755393897389701,0,0.900642406448441,1.35942722695261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421|short_description=p@chr7:19912585..19912612,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=366 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:19912585..19912612,- | |||
|id=chr7:19912585..19912612,- | |||
|ontology_enrichment_celltype=CL:0000063!4.11e-10!66;CL:0000144!1.30e-09!121;CL:0000012!1.30e-09!121;CL:0002563!7.29e-09!9;CL:0002251!7.29e-09!9;CL:0000548!1.98e-08!115;CL:0000004!1.98e-08!115;CL:0000255!1.98e-08!115;CL:0002371!6.84e-08!118;CL:0000049!9.04e-08!19;CL:0000557!1.34e-07!7;CL:0000066!2.37e-07!25;CL:0000219!9.88e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.62e-23,9;CL:0002251,3.62e-23,9;CL:0000239,1.62e-13,6;CL:0000677,1.62e-13,6;CL:0000584,1.62e-13,6;CL:0002076,2.00e-13,15;CL:0000223,1.53e-12,20;CL:0002250,1.45e-11,3;CL:0000075,1.48e-11,7;CL:0000049,7.26e-10,19;CL:0000066,9.89e-10,25;CL:0000557,2.69e-07,7;CL:0000034,8.37e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!4.34e-10!11;UBERON:0003350!7.29e-09!9;UBERON:0004808!7.29e-09!9;UBERON:0001277!7.29e-09!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.62e-23,9;UBERON:0004808,3.62e-23,9;UBERON:0001277,3.62e-23,9;UBERON:0000485,9.64e-19,11;UBERON:0001242,1.12e-15,13;UBERON:0001262,1.12e-15,13;UBERON:0004786,1.12e-15,13;UBERON:0000344,2.00e-13,15;UBERON:0004923,6.13e-08,24 | |||
|phase1_expression=0.160148847104794,2.09385244583617,0,1.51232105653415,1.50268718983904,2.01455126294268,1.63528848416868,0.129123323441576,0.281577444303333,0.234064526321993,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0.57423196411502,0,0,0,0,0,0.635030673459631,1.23012957516914,0,9.24325183204079,2.32728503501889,8.98345167554424,0,0,0,2.35292595212406,0,0,0,0.202753862439029,0,0,0.218025156380447,0.659058548203415,0.388859798148567,0.139986421625363,0,0,0,0,0,0.286533439938757,1.54701627683233,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0.383062014255563,0,0,0,0,0.279182999001381,0,0,0,0,0,0.302904773332736,0.604572480854284,20.5803786978191,2.58127163094416,0,0,0,0.448026887097336,0,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0.506719730950197,0,0,0,0.29688427812965,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0.628340120440365,0,2.75574786363617,5.99902730993408,2.03312363316904,0,0,0,0,0.255715457330331,0.41557608911912,0.486723789203273,0,0,0,0,0,0,0,0,0.204109497453984,0.2562274405697,0,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0,1.40442637462647,1.54408744268829,1.13665399758237,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.379335801906163,0,0,0.203651327845314,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0.169745085775188,0,0,0,0,0,0,0,0.491589944147214,0,0.144649058581512,1.50791283939272,0.54390568381871,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,1.02131881726136,0,0,0,0.177340233642274,0,0,0,0,0,0,1.81374878235628,0,0.241251699712623,0,0,0,0.18542530201051,0,0,0,0,0,0,3.56954702987096,3.21888340344413,1.52019971184866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.717710852875806,0.167884616364078,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.515559547031063,2.74033007908257,0.755393897389701,0,0.900642406448441,1.35942722695261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p@chr7:19912585..19912612,- | |||
}} |
Revision as of 12:41, 14 September 2013
Short description: | p@chr7:19912585..19912612, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:19912585..19912612, - |
Coexpression cluster: | MCL_coexpression_mm9:366 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.62e-23 | 9 |
epithelial cell of alimentary canal | 3.62e-23 | 9 |
brush border epithelial cell | 1.62e-13 | 6 |
gut absorptive cell | 1.62e-13 | 6 |
enterocyte | 1.62e-13 | 6 |
endo-epithelial cell | 2.00e-13 | 15 |
endodermal cell | 1.53e-12 | 20 |
intestinal crypt stem cell | 1.45e-11 | 3 |
columnar/cuboidal epithelial cell | 1.48e-11 | 7 |
common myeloid progenitor | 7.26e-10 | 19 |
epithelial cell | 9.89e-10 | 25 |
granulocyte monocyte progenitor cell | 2.69e-07 | 7 |
stem cell | 8.37e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.62e-23 | 9 |
gastrointestinal system epithelium | 3.62e-23 | 9 |
intestinal epithelium | 3.62e-23 | 9 |
simple columnar epithelium | 9.64e-19 | 11 |
intestinal mucosa | 1.12e-15 | 13 |
wall of intestine | 1.12e-15 | 13 |
gastrointestinal system mucosa | 1.12e-15 | 13 |
mucosa | 2.00e-13 | 15 |
organ component layer | 6.13e-08 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.