FFCP PHASE1:Mm9::chr7:28140963..28140996,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=192192|HGNC=|MCL_coexpression_id=116|UniProt=|association_with_transcript=0bp_to_ENSMUST00000123190_5end|description=CAGE_peak_1_at_Shkbp1_5end|id=chr7:28140963..28140996,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.47e-08!48;UBERON:0002390!5.37e-07!45;UBERON:0003061!5.37e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.04e-08,48;UBERON:0002405,7.04e-08,48;UBERON:0002390,5.08e-07,45;UBERON:0003061,5.08e-07,45|phase1_expression=1.28119077683835,1.39590163055744,4.09499315450582,3.93203474698879,4.00716583957078,3.52546471014969,2.33612640595526,5.16493293766305,1.40788722151667,0.936258105287974,1.88339765048055,2.07407613387875,8.04643430676667,5.85716696207283,6.99530499812892,3.44207954562704,4.19737126876888,6.94016763788123,5.34746291062381,5.09267582157636,2.12608225377674,6.056748023254,4.4403964153619,3.83981814704176,5.27641346454491,2.29692785646008,3.4460959692726,3.878482188346,1.90023419456374,3.2763916868791,2.88249663851896,2.54012269383853,3.69038872550742,0,1.73310971850765,1.99481574430191,0.816677425049476,22.600708059793,13.2827008569046,17.2762835511353,20.5881020810855,23.9065919735456,19.9059244742773,1.76255545165808,2.12891555560981,3.12029478674859,5.47673941043627,4.14247797122848,3.51497892375155,3.88859798148567,2.79972843250725,1.43752564364972,8.89247812106003,12.3311564141929,4.7053131879945,4.3734104126111,5.44413535883638,4.12537673821954,6.47412674750713,5.81890077199236,10.1413024560989,5.42151251310611,5.33576877666684,11.2487464660175,16.8107281636386,24.1563239081674,7.19040265244171,7.68436610643109,7.67303131082735,4.86021377994086,10.0955981448663,2.57085885963423,1.76694832761291,6.1245399607477,7.28425579738596,11.0306254393203,0,1.14918604276669,0.921639199537461,4.61602007055678,5.76372154695181,6.25096044668112,1.67509799400829,0,1.06958773443767,1.76777151284201,2.27794689278565,2.23679334990361,2.95332153999418,2.64500460373749,3.18850937571846,2.58127163094416,0.679971333707751,1.61910957491345,1.94932925234301,1.34408066129201,2.24711072210803,3.2381761289831,2.85764605063156,3.18005617059306,2.67602497575693,0,2.54805239706646,0,3.89683873820185,6.58735650235256,5.56076889516262,2.62622923353838,5.17875767294343,2.3750742250372,4.16364784238726,2.74018930480927,1.84492397804847,1.3565037649736,1.52865319276416,2.89033160058254,2.71914464507811,1.44599356919912,7.07688441559899,2.10296904931632,2.87093973998512,2.90925151881133,7.45567044872489,0.292780797011547,1.67557365450764,4.34276993854605,2.15667224110656,0.599902730993408,2.66847476853436,0.299581278809645,0.457500602818626,2.89005009859588,0.695297280769106,0.767146371990992,0.62336413367868,1.46017136760982,2.74966282395854,3.98102305952298,2.0217820674694,2.52530227063769,1.17108398666433,4.13823787980251,3.60124259610698,2.56198190320716,1.90502197623718,1.92170580427275,2.43624483855295,2.06962696591213,4.52692785158969,4.72765200419548,4.75068035242662,3.94552318369635,3.33656699070717,2.089512999133,1.64625709126355,1.59227413454795,2.80885274925294,1.54408744268829,3.40996199274711,2.69263504296152,3.28336483973535,3.42117916775928,1.65721314909647,1.37734962223183,2.31400669331067,1.86027155800326,3.21928081679543,2.10177616260905,2.13927804887525,2.29834449710733,2.26992666728396,2.77779976108131,1.53685080703735,1.74468344388483,1.05144974282064,2.6755199218614,5.61711931072457,3.70230793328962,2.77274725695804,4.64473343720877,1.67527699718721,2.21851877085677,2.66853652613844,3.04361001780095,6.16887780007865,2.63518327558417,3.51869292320377,2.98434708061726,2.14460495831032,0.898819408654221,3.45820879799511,4.58024928485045,2.65535061334314,4.45569199177942,3.38123207019241,4.2766778847516,3.29719228184964,2.73529697572242,3.85742876457969,1.47610147979602,2.04098346193787,4.19550357334122,0.889357881261447,3.33690211432188,3.73462090715086,4.04751802292737,2.23146133527353,2.65294875727659,3.31013607315846,2.30156909960649,2.59416362840057,1.92192989231657,0,2.23284568601102,1.87222603868736,1.26289438973556,1.61457672169721,3.37710464954357,2.40179147216586,4.35830247072115,3.09633455239849,3.39490171550376,3.75504397261603,3.1826188913945,3.33261097240419,4.87834119644497,4.25614889086716,3.5434350343804,3.98636921643718,2.94953966488328,4.66249451037918,5.93061140184197,12.0633027151418,5.98296252200581,1.47529281905711,2.48343071674259,1.28440471990234,0.937693492737625,0.655739781506702,2.27223834483936,2.2085575359138,2.73307121007647,3.87762115919038,4.54040716109849,3.56477878531831,6.51076020814315,2.83367491172426,3.79932615284705,5.53402889125133,0.642642632843614,2.41298144854057,3.02711526234334,2.44330439030364,4.61916344323099,1.32745138339963,3.15614827001476,4.23252979750651,2.82907619633847,3.54362271456927,1.53717573971964,2.32585463851399,1.81766864738753,2.13898427030833,1.8962205476149,1.05418608574999,3.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| ||
|EntrezGene=192192 | |||
|HGNC= | |||
|MCL_coexpression_id=116 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000123190_5end | |||
|description=CAGE_peak_1_at_Shkbp1_5end | |||
|id=chr7:28140963..28140996,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.47e-08!48;UBERON:0002390!5.37e-07!45;UBERON:0003061!5.37e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.04e-08,48;UBERON:0002405,7.04e-08,48;UBERON:0002390,5.08e-07,45;UBERON:0003061,5.08e-07,45 | |||
|phase1_expression=1.28119077683835,1.39590163055744,4.09499315450582,3.93203474698879,4.00716583957078,3.52546471014969,2.33612640595526,5.16493293766305,1.40788722151667,0.936258105287974,1.88339765048055,2.07407613387875,8.04643430676667,5.85716696207283,6.99530499812892,3.44207954562704,4.19737126876888,6.94016763788123,5.34746291062381,5.09267582157636,2.12608225377674,6.056748023254,4.4403964153619,3.83981814704176,5.27641346454491,2.29692785646008,3.4460959692726,3.878482188346,1.90023419456374,3.2763916868791,2.88249663851896,2.54012269383853,3.69038872550742,0,1.73310971850765,1.99481574430191,0.816677425049476,22.600708059793,13.2827008569046,17.2762835511353,20.5881020810855,23.9065919735456,19.9059244742773,1.76255545165808,2.12891555560981,3.12029478674859,5.47673941043627,4.14247797122848,3.51497892375155,3.88859798148567,2.79972843250725,1.43752564364972,8.89247812106003,12.3311564141929,4.7053131879945,4.3734104126111,5.44413535883638,4.12537673821954,6.47412674750713,5.81890077199236,10.1413024560989,5.42151251310611,5.33576877666684,11.2487464660175,16.8107281636386,24.1563239081674,7.19040265244171,7.68436610643109,7.67303131082735,4.86021377994086,10.0955981448663,2.57085885963423,1.76694832761291,6.1245399607477,7.28425579738596,11.0306254393203,0,1.14918604276669,0.921639199537461,4.61602007055678,5.76372154695181,6.25096044668112,1.67509799400829,0,1.06958773443767,1.76777151284201,2.27794689278565,2.23679334990361,2.95332153999418,2.64500460373749,3.18850937571846,2.58127163094416,0.679971333707751,1.61910957491345,1.94932925234301,1.34408066129201,2.24711072210803,3.2381761289831,2.85764605063156,3.18005617059306,2.67602497575693,0,2.54805239706646,0,3.89683873820185,6.58735650235256,5.56076889516262,2.62622923353838,5.17875767294343,2.3750742250372,4.16364784238726,2.74018930480927,1.84492397804847,1.3565037649736,1.52865319276416,2.89033160058254,2.71914464507811,1.44599356919912,7.07688441559899,2.10296904931632,2.87093973998512,2.90925151881133,7.45567044872489,0.292780797011547,1.67557365450764,4.34276993854605,2.15667224110656,0.599902730993408,2.66847476853436,0.299581278809645,0.457500602818626,2.89005009859588,0.695297280769106,0.767146371990992,0.62336413367868,1.46017136760982,2.74966282395854,3.98102305952298,2.0217820674694,2.52530227063769,1.17108398666433,4.13823787980251,3.60124259610698,2.56198190320716,1.90502197623718,1.92170580427275,2.43624483855295,2.06962696591213,4.52692785158969,4.72765200419548,4.75068035242662,3.94552318369635,3.33656699070717,2.089512999133,1.64625709126355,1.59227413454795,2.80885274925294,1.54408744268829,3.40996199274711,2.69263504296152,3.28336483973535,3.42117916775928,1.65721314909647,1.37734962223183,2.31400669331067,1.86027155800326,3.21928081679543,2.10177616260905,2.13927804887525,2.29834449710733,2.26992666728396,2.77779976108131,1.53685080703735,1.74468344388483,1.05144974282064,2.6755199218614,5.61711931072457,3.70230793328962,2.77274725695804,4.64473343720877,1.67527699718721,2.21851877085677,2.66853652613844,3.04361001780095,6.16887780007865,2.63518327558417,3.51869292320377,2.98434708061726,2.14460495831032,0.898819408654221,3.45820879799511,4.58024928485045,2.65535061334314,4.45569199177942,3.38123207019241,4.2766778847516,3.29719228184964,2.73529697572242,3.85742876457969,1.47610147979602,2.04098346193787,4.19550357334122,0.889357881261447,3.33690211432188,3.73462090715086,4.04751802292737,2.23146133527353,2.65294875727659,3.31013607315846,2.30156909960649,2.59416362840057,1.92192989231657,0,2.23284568601102,1.87222603868736,1.26289438973556,1.61457672169721,3.37710464954357,2.40179147216586,4.35830247072115,3.09633455239849,3.39490171550376,3.75504397261603,3.1826188913945,3.33261097240419,4.87834119644497,4.25614889086716,3.5434350343804,3.98636921643718,2.94953966488328,4.66249451037918,5.93061140184197,12.0633027151418,5.98296252200581,1.47529281905711,2.48343071674259,1.28440471990234,0.937693492737625,0.655739781506702,2.27223834483936,2.2085575359138,2.73307121007647,3.87762115919038,4.54040716109849,3.56477878531831,6.51076020814315,2.83367491172426,3.79932615284705,5.53402889125133,0.642642632843614,2.41298144854057,3.02711526234334,2.44330439030364,4.61916344323099,1.32745138339963,3.15614827001476,4.23252979750651,2.82907619633847,3.54362271456927,1.53717573971964,2.32585463851399,1.81766864738753,2.13898427030833,1.8962205476149,1.05418608574999,3.09406629744561,1.70219802876894,3.96134406868882,5.56242340265844,3.64372959553707,3.3694644392032,2.14042581122485,2.63278432963394,2.43571959291679,2.3467170806371,2.54198485036584,2.42581237860458,3.62749756471256,1.77610869365496,2.77439454669517,4.29740438411291,4.43180429311665,3.78925087618806,1.48340241608408,6.32222258952055,4.95328483111734,4.07427960213366,3.01389531207506,2.87057878214153,3.43167259809784,2.37969801991397,2.79902904647316,2.07299960706636,9.54670618015114,4.27053591334533,3.45643094115643,3.02414954301044,5.43629569637619,2.8387133287003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| |||
|short_description=p1@Shkbp1 | |||
}} | |||
Revision as of 12:58, 14 September 2013
| Short description: | p1@Shkbp1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Shkbp1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:116 |
| Association with transcript: | 0bp_to_ENSMUST00000123190_5end |
| EntrezGene: | Shkbp1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hemolymphoid system | 7.04e-08 | 48 |
| immune system | 7.04e-08 | 48 |
| hematopoietic system | 5.08e-07 | 45 |
| blood island | 5.08e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
