FFCP PHASE1:Mm9::chr7:52156681..52156700,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11771|HGNC=|MCL_coexpression_id=20|UniProt=|association_with_transcript=363bp_to_ENSMUST00000170656_5end|description=CAGE_peak_4_at_Ap2a1_5end|id=chr7:52156681..52156700,-|ontology_enrichment_celltype=CL:0000221!1.63e-07!44;CL:0000133!1.63e-07!44;CL:0002319!3.49e-07!43|ontology_enrichment_celltype_v019_2=CL:0002610,1.28e-08,3;CL:0002614,2.69e-08,3;CL:0000117,2.80e-07,23;CL:0000337,2.80e-07,23;CL:0002319,8.61e-07,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.57e-22!73;UBERON:0005743!1.57e-22!73;UBERON:0000073!2.37e-22!75;UBERON:0001016!2.37e-22!75;UBERON:0000033!9.23e-20!63;UBERON:0000955!1.18e-19!50;UBERON:0006238!1.18e-19!50;UBERON:0001049!1.20e-19!52;UBERON:0005068!1.20e-19!52;UBERON:0006241!1.20e-19!52;UBERON:0007135!1.20e-19!52;UBERON:0002616!7.91e-19!49;UBERON:0004121!2.84e-17!102;UBERON:0000924!2.84e-17!102;UBERON:0006601!2.84e-17!102;UBERON:0002346!6.75e-17!71;UBERON:0003075!6.75e-17!71;UBERON:0007284!6.75e-17!71;UBERON:0002020!8.25e-15!34;UBERON:0003056!9.09e-13!49;UBERON:0007811!1.76e-12!86;UBERON:0003080!1.93e-12!40;UBERON:0002791!2.65e-12!29;UBERON:0003528!2.65e-12!29;UBERON:0001893!2.65e-12!29;UBERON:0002780!1.33e-11!39;UBERON:0001890!1.33e-11!39;UBERON:0006240!1.33e-11!39;UBERON:0002021!1.79e-10!10;UBERON:0000411!1.79e-10!10;UBERON:0001950!1.79e-10!10;UBERON:0000153!3.22e-10!94;UBERON:0000956!2.54e-09!21;UBERON:0001869!2.54e-09!21;UBERON:0000203!2.54e-09!21;UBERON:0002619!1.37e-08!17;UBERON:0003076!1.87e-08!12;UBERON:0003057!1.87e-08!12;UBERON:0002298!8.44e-08!6;UBERON:0000489!6.65e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.16e-35,54;UBERON:0001017,1.12e-34,73;UBERON:0001016,1.45e-33,75;UBERON:0001049,4.24e-31,52;UBERON:0005068,4.24e-31,52;UBERON:0006241,4.24e-31,52;UBERON:0007135,4.24e-31,52;UBERON:0000955,5.46e-27,47;UBERON:0006238,5.46e-27,47;UBERON:0004121,1.05e-26,95;UBERON:0000924,1.05e-26,95;UBERON:0006601,1.05e-26,95;UBERON:0002346,5.10e-26,64;UBERON:0003075,5.10e-26,64;UBERON:0007284,5.10e-26,64;UBERON:0002616,2.24e-25,46;UBERON:0002020,2.72e-23,34;UBERON:0010371,5.24e-22,73;UBERON:0002021,1.23e-21,10;UBERON:0000411,1.23e-21,10;UBERON:0001950,1.23e-21,10;UBERON:0003528,8.60e-20,29;UBERON:0002791,8.60e-20,29;UBERON:0001893,8.60e-20,29;UBERON:0003080,1.26e-19,40;UBERON:0002780,6.16e-18,39;UBERON:0001890,6.16e-18,39;UBERON:0006240,6.16e-18,39;UBERON:0002619,5.37e-17,17;UBERON:0003056,7.36e-17,49;UBERON:0010314,4.09e-16,92;UBERON:0000956,9.90e-16,21;UBERON:0001869,9.90e-16,21;UBERON:0000203,9.90e-16,21;UBERON:0003076,2.29e-12,12;UBERON:0003057,2.29e-12,12;UBERON:0000025,1.00e-10,114;UBERON:0002950,1.30e-10,4;UBERON:0001891,1.30e-10,4;UBERON:0009616,1.30e-10,4;UBERON:0010286,1.30e-10,4;UBERON:0004111,1.31e-09,122;UBERON:0004684,1.28e-08,3;UBERON:0002275,1.28e-08,3;UBERON:0011216,1.67e-08,194;UBERON:0002038,2.69e-08,3;UBERON:0009663,2.69e-08,3;UBERON:0009661,2.69e-08,3;UBERON:0000125,2.69e-08,3;UBERON:0002308,2.69e-08,3;UBERON:0004733,3.76e-07,6;UBERON:0004732,3.76e-07,6;UBERON:0002028,3.76e-07,6;UBERON:0007277,3.76e-07,6;UBERON:0002240,9.89e-07,6;UBERON:0005174,9.89e-07,6;UBERON:0001137,9.89e-07,6|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.65407546914134,1.09843091367236,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,1.79760066311043,4.2264013585371,0.103689612308478,0.135005938331691,0,1.99955689082663,6.40518768759679,0,0.287536413054709,0,8.8092704799511,4.34136949489638,5.06901559745603,0,0.182975287204819,0,7.2587579740359,2.8138130501584,4.27835093775068,1.17851434189467,0.711858403995515,0,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34224637609238,3.77004072264219,0,0,0,0,5.69204429738326,9.60751265919116,0.125654352112864,2.25971616249959,2.55715457330331,7.06479351502504,8.76102820565891,0.101839363850316,0,0,0.210441855886474,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,1.01825663922657,0.775809948670503,0.280543279561274,0.442655759869801,0.147610147979602,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,9.9541365792431,16.7612711826851,0.163934945376675,0,0.315508219416257,0,0,0,0,0,0,0,0,1.60660658210904,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.517434735131018,0,0,0,0.164549020602121,0,0,0.847328283455281,0,0,0,0,0,0,0,17.4299783889879,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0.337912250981556,0,0,0.209718688851422,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.84130094602871,4.01026859407578,2.57779773515531,3.42541259885321,3.0215755895588,3.37511250115903,1.35096360967266,1.35942722695261,1.55328093525546,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0.231867835620421|short_description=p4@Ap2a1}} | ||
|EntrezGene=11771 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt= | |||
|association_with_transcript=363bp_to_ENSMUST00000170656_5end | |||
|description=CAGE_peak_4_at_Ap2a1_5end | |||
|id=chr7:52156681..52156700,- | |||
|ontology_enrichment_celltype=CL:0000221!1.63e-07!44;CL:0000133!1.63e-07!44;CL:0002319!3.49e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.28e-08,3;CL:0002614,2.69e-08,3;CL:0000117,2.80e-07,23;CL:0000337,2.80e-07,23;CL:0002319,8.61e-07,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.57e-22!73;UBERON:0005743!1.57e-22!73;UBERON:0000073!2.37e-22!75;UBERON:0001016!2.37e-22!75;UBERON:0000033!9.23e-20!63;UBERON:0000955!1.18e-19!50;UBERON:0006238!1.18e-19!50;UBERON:0001049!1.20e-19!52;UBERON:0005068!1.20e-19!52;UBERON:0006241!1.20e-19!52;UBERON:0007135!1.20e-19!52;UBERON:0002616!7.91e-19!49;UBERON:0004121!2.84e-17!102;UBERON:0000924!2.84e-17!102;UBERON:0006601!2.84e-17!102;UBERON:0002346!6.75e-17!71;UBERON:0003075!6.75e-17!71;UBERON:0007284!6.75e-17!71;UBERON:0002020!8.25e-15!34;UBERON:0003056!9.09e-13!49;UBERON:0007811!1.76e-12!86;UBERON:0003080!1.93e-12!40;UBERON:0002791!2.65e-12!29;UBERON:0003528!2.65e-12!29;UBERON:0001893!2.65e-12!29;UBERON:0002780!1.33e-11!39;UBERON:0001890!1.33e-11!39;UBERON:0006240!1.33e-11!39;UBERON:0002021!1.79e-10!10;UBERON:0000411!1.79e-10!10;UBERON:0001950!1.79e-10!10;UBERON:0000153!3.22e-10!94;UBERON:0000956!2.54e-09!21;UBERON:0001869!2.54e-09!21;UBERON:0000203!2.54e-09!21;UBERON:0002619!1.37e-08!17;UBERON:0003076!1.87e-08!12;UBERON:0003057!1.87e-08!12;UBERON:0002298!8.44e-08!6;UBERON:0000489!6.65e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.16e-35,54;UBERON:0001017,1.12e-34,73;UBERON:0001016,1.45e-33,75;UBERON:0001049,4.24e-31,52;UBERON:0005068,4.24e-31,52;UBERON:0006241,4.24e-31,52;UBERON:0007135,4.24e-31,52;UBERON:0000955,5.46e-27,47;UBERON:0006238,5.46e-27,47;UBERON:0004121,1.05e-26,95;UBERON:0000924,1.05e-26,95;UBERON:0006601,1.05e-26,95;UBERON:0002346,5.10e-26,64;UBERON:0003075,5.10e-26,64;UBERON:0007284,5.10e-26,64;UBERON:0002616,2.24e-25,46;UBERON:0002020,2.72e-23,34;UBERON:0010371,5.24e-22,73;UBERON:0002021,1.23e-21,10;UBERON:0000411,1.23e-21,10;UBERON:0001950,1.23e-21,10;UBERON:0003528,8.60e-20,29;UBERON:0002791,8.60e-20,29;UBERON:0001893,8.60e-20,29;UBERON:0003080,1.26e-19,40;UBERON:0002780,6.16e-18,39;UBERON:0001890,6.16e-18,39;UBERON:0006240,6.16e-18,39;UBERON:0002619,5.37e-17,17;UBERON:0003056,7.36e-17,49;UBERON:0010314,4.09e-16,92;UBERON:0000956,9.90e-16,21;UBERON:0001869,9.90e-16,21;UBERON:0000203,9.90e-16,21;UBERON:0003076,2.29e-12,12;UBERON:0003057,2.29e-12,12;UBERON:0000025,1.00e-10,114;UBERON:0002950,1.30e-10,4;UBERON:0001891,1.30e-10,4;UBERON:0009616,1.30e-10,4;UBERON:0010286,1.30e-10,4;UBERON:0004111,1.31e-09,122;UBERON:0004684,1.28e-08,3;UBERON:0002275,1.28e-08,3;UBERON:0011216,1.67e-08,194;UBERON:0002038,2.69e-08,3;UBERON:0009663,2.69e-08,3;UBERON:0009661,2.69e-08,3;UBERON:0000125,2.69e-08,3;UBERON:0002308,2.69e-08,3;UBERON:0004733,3.76e-07,6;UBERON:0004732,3.76e-07,6;UBERON:0002028,3.76e-07,6;UBERON:0007277,3.76e-07,6;UBERON:0002240,9.89e-07,6;UBERON:0005174,9.89e-07,6;UBERON:0001137,9.89e-07,6 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0.129123323441576,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0.65407546914134,1.09843091367236,0,0.279972843250725,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,1.79760066311043,4.2264013585371,0.103689612308478,0.135005938331691,0,1.99955689082663,6.40518768759679,0,0.287536413054709,0,8.8092704799511,4.34136949489638,5.06901559745603,0,0.182975287204819,0,7.2587579740359,2.8138130501584,4.27835093775068,1.17851434189467,0.711858403995515,0,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34224637609238,3.77004072264219,0,0,0,0,5.69204429738326,9.60751265919116,0.125654352112864,2.25971616249959,2.55715457330331,7.06479351502504,8.76102820565891,0.101839363850316,0,0,0.210441855886474,0,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,1.01825663922657,0.775809948670503,0.280543279561274,0.442655759869801,0.147610147979602,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,9.9541365792431,16.7612711826851,0.163934945376675,0,0.315508219416257,0,0,0,0,0,0,0,0,1.60660658210904,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.517434735131018,0,0,0,0.164549020602121,0,0,0.847328283455281,0,0,0,0,0,0,0,17.4299783889879,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0,0,0,0,0,0,0,0.129159823477731,0.337912250981556,0,0,0.209718688851422,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.84130094602871,4.01026859407578,2.57779773515531,3.42541259885321,3.0215755895588,3.37511250115903,1.35096360967266,1.35942722695261,1.55328093525546,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p4@Ap2a1 | |||
}} |
Revision as of 13:42, 14 September 2013
Short description: | p4@Ap2a1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ap2a1_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 363bp_to_ENSMUST00000170656_5end |
EntrezGene: | Ap2a1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.28e-08 | 3 |
neuron of the substantia nigra | 2.69e-08 | 3 |
CNS neuron (sensu Vertebrata) | 2.80e-07 | 23 |
neuroblast (sensu Vertebrata) | 2.80e-07 | 23 |
neural cell | 8.61e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.