FFCP PHASE1:Mm9::chr8:122335239..122335244,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:122335239..122335244,+|id=chr8:122335239..122335244,+|ontology_enrichment_celltype=CL:0002563!3.09e-61!9;CL:0002251!3.09e-61!9;CL:0000239!2.88e-41!6;CL:0000677!2.88e-41!6;CL:0000212!2.88e-41!6;CL:0000584!2.88e-41!6;CL:0002076!1.64e-36!15;CL:0000075!2.30e-35!7;CL:0000223!3.23e-27!20;CL:0000066!1.30e-26!25;CL:0002250!2.44e-21!3;CL:0000063!1.76e-09!66;CL:0002321!3.71e-07!70;CL:0000220!3.71e-07!70|ontology_enrichment_celltype_v019_2=CL:0002563,4.97e-77,9;CL:0002251,4.97e-77,9;CL:0000239,6.21e-65,6;CL:0000677,6.21e-65,6;CL:0000584,6.21e-65,6;CL:0000075,1.01e-55,7;CL:0002076,2.35e-46,15;CL:0000223,7.88e-35,20;CL:0000066,6.66e-28,25;CL:0002250,1.04e-15,3;CL:0002321,5.63e-10,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003350!3.09e-61!9;UBERON:0004808!3.09e-61!9;UBERON:0001277!3.09e-61!9;UBERON:0001242!7.99e-52!13;UBERON:0000060!7.99e-52!13;UBERON:0001262!7.99e-52!13;UBERON:0004786!7.99e-52!13;UBERON:0000485!5.27e-50!11;UBERON:0000344!8.03e-45!15;UBERON:0004923!1.00e-27!24;UBERON:0000160!3.06e-18!43;UBERON:0005409!1.57e-15!59;UBERON:0003929!2.27e-09!55;UBERON:0000490!1.19e-07!66;UBERON:0005911!2.83e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.97e-77,9;UBERON:0004808,4.97e-77,9;UBERON:0001277,4.97e-77,9;UBERON:0000485,4.29e-63,11;UBERON:0001242,1.94e-53,13;UBERON:0001262,1.94e-53,13;UBERON:0004786,1.94e-53,13;UBERON:0000344,2.35e-46,15;UBERON:0004923,4.66e-29,24;UBERON:0000160,1.57e-22,31;UBERON:0005409,7.01e-15,47;UBERON:0003929,1.03e-12,55;UBERON:0000490,1.38e-10,66;UBERON:0005911,4.02e-10,69|phase1_expression=0,1.04692622291808,1.36499771816861,6.95667686005709,6.51164448930251,1.34303417529512,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646413698057667,0,0,0.221730510655305,0,0,0,3.17736781726402,0.831173226792462,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:122335239..122335244,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:122335239..122335244,+ | |||
|id=chr8:122335239..122335244,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.09e-61!9;CL:0002251!3.09e-61!9;CL:0000239!2.88e-41!6;CL:0000677!2.88e-41!6;CL:0000212!2.88e-41!6;CL:0000584!2.88e-41!6;CL:0002076!1.64e-36!15;CL:0000075!2.30e-35!7;CL:0000223!3.23e-27!20;CL:0000066!1.30e-26!25;CL:0002250!2.44e-21!3;CL:0000063!1.76e-09!66;CL:0002321!3.71e-07!70;CL:0000220!3.71e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.97e-77,9;CL:0002251,4.97e-77,9;CL:0000239,6.21e-65,6;CL:0000677,6.21e-65,6;CL:0000584,6.21e-65,6;CL:0000075,1.01e-55,7;CL:0002076,2.35e-46,15;CL:0000223,7.88e-35,20;CL:0000066,6.66e-28,25;CL:0002250,1.04e-15,3;CL:0002321,5.63e-10,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003350!3.09e-61!9;UBERON:0004808!3.09e-61!9;UBERON:0001277!3.09e-61!9;UBERON:0001242!7.99e-52!13;UBERON:0000060!7.99e-52!13;UBERON:0001262!7.99e-52!13;UBERON:0004786!7.99e-52!13;UBERON:0000485!5.27e-50!11;UBERON:0000344!8.03e-45!15;UBERON:0004923!1.00e-27!24;UBERON:0000160!3.06e-18!43;UBERON:0005409!1.57e-15!59;UBERON:0003929!2.27e-09!55;UBERON:0000490!1.19e-07!66;UBERON:0005911!2.83e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,4.97e-77,9;UBERON:0004808,4.97e-77,9;UBERON:0001277,4.97e-77,9;UBERON:0000485,4.29e-63,11;UBERON:0001242,1.94e-53,13;UBERON:0001262,1.94e-53,13;UBERON:0004786,1.94e-53,13;UBERON:0000344,2.35e-46,15;UBERON:0004923,4.66e-29,24;UBERON:0000160,1.57e-22,31;UBERON:0005409,7.01e-15,47;UBERON:0003929,1.03e-12,55;UBERON:0000490,1.38e-10,66;UBERON:0005911,4.02e-10,69 | |||
|phase1_expression=0,1.04692622291808,1.36499771816861,6.95667686005709,6.51164448930251,1.34303417529512,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646413698057667,0,0,0.221730510655305,0,0,0,3.17736781726402,0.831173226792462,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:122335239..122335244,+ | |||
}} |
Revision as of 14:56, 14 September 2013
Short description: | p@chr8:122335239..122335244, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:122335239..122335244, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.97e-77 | 9 |
epithelial cell of alimentary canal | 4.97e-77 | 9 |
brush border epithelial cell | 6.21e-65 | 6 |
gut absorptive cell | 6.21e-65 | 6 |
enterocyte | 6.21e-65 | 6 |
columnar/cuboidal epithelial cell | 1.01e-55 | 7 |
endo-epithelial cell | 2.35e-46 | 15 |
endodermal cell | 7.88e-35 | 20 |
epithelial cell | 6.66e-28 | 25 |
intestinal crypt stem cell | 1.04e-15 | 3 |
embryonic cell | 5.63e-10 | 70 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 4.97e-77 | 9 |
gastrointestinal system epithelium | 4.97e-77 | 9 |
intestinal epithelium | 4.97e-77 | 9 |
simple columnar epithelium | 4.29e-63 | 11 |
intestinal mucosa | 1.94e-53 | 13 |
wall of intestine | 1.94e-53 | 13 |
gastrointestinal system mucosa | 1.94e-53 | 13 |
mucosa | 2.35e-46 | 15 |
organ component layer | 4.66e-29 | 24 |
intestine | 1.57e-22 | 31 |
gastrointestinal system | 7.01e-15 | 47 |
gut epithelium | 1.03e-12 | 55 |
unilaminar epithelium | 1.38e-10 | 66 |
endo-epithelium | 4.02e-10 | 69 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.