FFCP PHASE1:Mm9::chr8:42140187..42140196,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=102103|HGNC=|MCL_coexpression_id=3675|UniProt=Q5HZI1|association_with_transcript=-39bp_to_ENSMUST00000093534,NM_001005864,uc009lnl.1_5end|description=CAGE_peak_24_at_Mtus1_5end|id=chr8:42140187..42140196,-|ontology_enrichment_celltype=CL:0000117!1.08e-16!23;CL:0000337!1.08e-16!23;CL:0000540!1.97e-11!33;CL:0000047!1.97e-11!33;CL:0000031!1.97e-11!33;CL:0000404!1.97e-11!33;CL:0000393!6.64e-09!39;CL:0000211!6.64e-09!39;CL:0000221!3.22e-08!44;CL:0000133!3.22e-08!44;CL:0002319!1.25e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,4.99e-20,23;CL:0000337,4.99e-20,23;CL:0002613,7.32e-16,3;CL:0000120,6.98e-15,3;CL:0000540,1.51e-13,33;CL:0000047,1.51e-13,33;CL:0000031,1.51e-13,33;CL:0000404,1.51e-13,33;CL:0000393,3.00e-11,39;CL:0000211,3.00e-11,39;CL:0002319,4.51e-10,43;CL:0000221,8.23e-10,44;CL:0000133,8.23e-10,44;CL:0002612,9.02e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.78e-13!71;UBERON:0003075!1.78e-13!71;UBERON:0007284!1.78e-13!71;UBERON:0004121!1.45e-11!102;UBERON:0000924!1.45e-11!102;UBERON:0006601!1.45e-11!102;UBERON:0000970!1.66e-11!9;UBERON:0000019!1.66e-11!9;UBERON:0000047!1.66e-11!9;UBERON:0004088!1.66e-11!9;UBERON:0002104!1.66e-11!9;UBERON:0001456!1.66e-11!9;UBERON:0003072!1.66e-11!9;UBERON:0003071!1.66e-11!9;UBERON:0004128!1.66e-11!9;UBERON:0000033!5.24e-10!63;UBERON:0000020!6.93e-10!12;UBERON:0001032!6.93e-10!12;UBERON:0004456!6.93e-10!12;UBERON:0001444!4.59e-09!11;UBERON:0005085!5.89e-09!13;UBERON:0003076!7.69e-09!12;UBERON:0003057!7.69e-09!12;UBERON:0002020!2.83e-08!34;UBERON:0003056!3.03e-08!49;UBERON:0001948!3.62e-08!5;UBERON:0002315!3.62e-08!5;UBERON:0001049!8.64e-08!52;UBERON:0005068!8.64e-08!52;UBERON:0006241!8.64e-08!52;UBERON:0007135!8.64e-08!52;UBERON:0001017!1.48e-07!73;UBERON:0005743!1.48e-07!73;UBERON:0000073!3.53e-07!75;UBERON:0001016!3.53e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0000970,8.65e-27,9;UBERON:0000019,8.65e-27,9;UBERON:0000047,8.65e-27,9;UBERON:0010312,8.65e-27,9;UBERON:0004088,8.65e-27,9;UBERON:0002104,8.65e-27,9;UBERON:0001456,8.65e-27,9;UBERON:0003072,8.65e-27,9;UBERON:0004128,8.65e-27,9;UBERON:0003071,8.65e-27,9;UBERON:0001444,8.26e-22,11;UBERON:0000020,6.12e-20,12;UBERON:0001032,6.12e-20,12;UBERON:0004456,6.12e-20,12;UBERON:0000033,2.34e-18,13;UBERON:0005085,2.34e-18,13;UBERON:0000369,3.29e-16,5;UBERON:0002435,3.29e-16,5;UBERON:0000204,3.29e-16,5;UBERON:0010082,3.29e-16,5;UBERON:0002346,1.86e-15,64;UBERON:0003075,1.86e-15,64;UBERON:0007284,1.86e-15,64;UBERON:0004121,1.19e-14,95;UBERON:0000924,1.19e-14,95;UBERON:0006601,1.19e-14,95;UBERON:0010371,2.79e-13,73;UBERON:0003056,6.61e-13,49;UBERON:0002420,3.30e-10,8;UBERON:0007245,3.30e-10,8;UBERON:0010009,3.30e-10,8;UBERON:0010011,3.30e-10,8;UBERON:0000454,3.30e-10,8;UBERON:0010314,4.49e-10,92;UBERON:0001948,1.13e-09,5;UBERON:0002315,1.13e-09,5;UBERON:0002020,2.12e-08,34;UBERON:0002240,3.87e-08,6;UBERON:0005174,3.87e-08,6;UBERON:0001137,3.87e-08,6;UBERON:0002257,9.02e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,1.14058573539325,0.405017814995072,0.630974884054146,1.42825492201902,0.220868540951614,0.734944795289724,0.862609239164127,0,0,0,0.153606533256243,1.84640802822271,1.82975287204819,2.08365348222704,0,0,0,1.76777151284201,0.427115042397309,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.461230994512117,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,0,0,1.25654352112864,0,0,0,0.162241263067758,0,0,0,0,1.30120442962704,1.37941262660084,1.26043490863744,2.41127708537144,1.97305847538851,2.0498195245576,2.52994656311268,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.512200817262403,0.729320151204882,0.419226325255965,0,0,0.824140228955577,0,0,0,0.377252682772152,0.37456602987953,0.320125762024346,0.34461281373368,0,0.347652977834566,0.192909220463705,0,0,0.685738504770831,0.354951612318675,0,0.726732083161643,0.188218760830661,0.0846146078916765,0.182927972872773,0.789209134313529,0,0.561142271657738,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.499621155875892,0.233931608445408,0,0,0,0|short_description=p24@Mtus1}} | ||
|EntrezGene=102103 | |||
|HGNC= | |||
|MCL_coexpression_id=3675 | |||
|UniProt=Q5HZI1 | |||
|association_with_transcript=-39bp_to_ENSMUST00000093534,NM_001005864,uc009lnl.1_5end | |||
|description=CAGE_peak_24_at_Mtus1_5end | |||
|id=chr8:42140187..42140196,- | |||
|ontology_enrichment_celltype=CL:0000117!1.08e-16!23;CL:0000337!1.08e-16!23;CL:0000540!1.97e-11!33;CL:0000047!1.97e-11!33;CL:0000031!1.97e-11!33;CL:0000404!1.97e-11!33;CL:0000393!6.64e-09!39;CL:0000211!6.64e-09!39;CL:0000221!3.22e-08!44;CL:0000133!3.22e-08!44;CL:0002319!1.25e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.99e-20,23;CL:0000337,4.99e-20,23;CL:0002613,7.32e-16,3;CL:0000120,6.98e-15,3;CL:0000540,1.51e-13,33;CL:0000047,1.51e-13,33;CL:0000031,1.51e-13,33;CL:0000404,1.51e-13,33;CL:0000393,3.00e-11,39;CL:0000211,3.00e-11,39;CL:0002319,4.51e-10,43;CL:0000221,8.23e-10,44;CL:0000133,8.23e-10,44;CL:0002612,9.02e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.78e-13!71;UBERON:0003075!1.78e-13!71;UBERON:0007284!1.78e-13!71;UBERON:0004121!1.45e-11!102;UBERON:0000924!1.45e-11!102;UBERON:0006601!1.45e-11!102;UBERON:0000970!1.66e-11!9;UBERON:0000019!1.66e-11!9;UBERON:0000047!1.66e-11!9;UBERON:0004088!1.66e-11!9;UBERON:0002104!1.66e-11!9;UBERON:0001456!1.66e-11!9;UBERON:0003072!1.66e-11!9;UBERON:0003071!1.66e-11!9;UBERON:0004128!1.66e-11!9;UBERON:0000033!5.24e-10!63;UBERON:0000020!6.93e-10!12;UBERON:0001032!6.93e-10!12;UBERON:0004456!6.93e-10!12;UBERON:0001444!4.59e-09!11;UBERON:0005085!5.89e-09!13;UBERON:0003076!7.69e-09!12;UBERON:0003057!7.69e-09!12;UBERON:0002020!2.83e-08!34;UBERON:0003056!3.03e-08!49;UBERON:0001948!3.62e-08!5;UBERON:0002315!3.62e-08!5;UBERON:0001049!8.64e-08!52;UBERON:0005068!8.64e-08!52;UBERON:0006241!8.64e-08!52;UBERON:0007135!8.64e-08!52;UBERON:0001017!1.48e-07!73;UBERON:0005743!1.48e-07!73;UBERON:0000073!3.53e-07!75;UBERON:0001016!3.53e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,8.65e-27,9;UBERON:0000019,8.65e-27,9;UBERON:0000047,8.65e-27,9;UBERON:0010312,8.65e-27,9;UBERON:0004088,8.65e-27,9;UBERON:0002104,8.65e-27,9;UBERON:0001456,8.65e-27,9;UBERON:0003072,8.65e-27,9;UBERON:0004128,8.65e-27,9;UBERON:0003071,8.65e-27,9;UBERON:0001444,8.26e-22,11;UBERON:0000020,6.12e-20,12;UBERON:0001032,6.12e-20,12;UBERON:0004456,6.12e-20,12;UBERON:0000033,2.34e-18,13;UBERON:0005085,2.34e-18,13;UBERON:0000369,3.29e-16,5;UBERON:0002435,3.29e-16,5;UBERON:0000204,3.29e-16,5;UBERON:0010082,3.29e-16,5;UBERON:0002346,1.86e-15,64;UBERON:0003075,1.86e-15,64;UBERON:0007284,1.86e-15,64;UBERON:0004121,1.19e-14,95;UBERON:0000924,1.19e-14,95;UBERON:0006601,1.19e-14,95;UBERON:0010371,2.79e-13,73;UBERON:0003056,6.61e-13,49;UBERON:0002420,3.30e-10,8;UBERON:0007245,3.30e-10,8;UBERON:0010009,3.30e-10,8;UBERON:0010011,3.30e-10,8;UBERON:0000454,3.30e-10,8;UBERON:0010314,4.49e-10,92;UBERON:0001948,1.13e-09,5;UBERON:0002315,1.13e-09,5;UBERON:0002020,2.12e-08,34;UBERON:0002240,3.87e-08,6;UBERON:0005174,3.87e-08,6;UBERON:0001137,3.87e-08,6;UBERON:0002257,9.02e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,1.05798195854407,1.90149421051854,0,0,0,0,0,0,0,1.14058573539325,0.405017814995072,0.630974884054146,1.42825492201902,0.220868540951614,0.734944795289724,0.862609239164127,0,0,0,0.153606533256243,1.84640802822271,1.82975287204819,2.08365348222704,0,0,0,1.76777151284201,0.427115042397309,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0.461230994512117,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.83778682725382,0,0,0,0,0,0,1.25654352112864,0,0,0,0.162241263067758,0,0,0,0,1.30120442962704,1.37941262660084,1.26043490863744,2.41127708537144,1.97305847538851,2.0498195245576,2.52994656311268,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.512200817262403,0.729320151204882,0.419226325255965,0,0,0.824140228955577,0,0,0,0.377252682772152,0.37456602987953,0.320125762024346,0.34461281373368,0,0.347652977834566,0.192909220463705,0,0,0.685738504770831,0.354951612318675,0,0.726732083161643,0.188218760830661,0.0846146078916765,0.182927972872773,0.789209134313529,0,0.561142271657738,0.237270036248348,0.0985044823755635,0.409231043169689,0.154936841185966,0,0.499621155875892,0.233931608445408,0,0,0,0 | |||
|short_description=p24@Mtus1 | |||
}} |
Revision as of 15:38, 14 September 2013
Short description: | p24@Mtus1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_24_at_Mtus1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3675 |
Association with transcript: | -39bp_to_ENSMUST00000093534, NM_001005864, uc009lnl.1_5end |
EntrezGene: | Mtus1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.99e-20 | 23 |
neuroblast (sensu Vertebrata) | 4.99e-20 | 23 |
striatum neuron | 7.32e-16 | 3 |
granule cell | 6.98e-15 | 3 |
neuron | 1.51e-13 | 33 |
neuronal stem cell | 1.51e-13 | 33 |
neuroblast | 1.51e-13 | 33 |
electrically signaling cell | 1.51e-13 | 33 |
electrically responsive cell | 3.00e-11 | 39 |
electrically active cell | 3.00e-11 | 39 |
neural cell | 4.51e-10 | 43 |
ectodermal cell | 8.23e-10 | 44 |
neurectodermal cell | 8.23e-10 | 44 |
neuron of the ventral spinal cord | 9.02e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.