FFCP PHASE1:Mm9::chr8:56040162..56040173,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=234267|HGNC=|MCL_coexpression_id=2|UniProt=P35802,Q542P2|association_with_transcript=81bp_to_ENSMUST00000033915,NM_001253756,NM_153581,uc009lsl.2_5end|description=CAGE_peak_13_at_Gpm6a_5end|id=chr8:56040162..56040173,+|ontology_enrichment_celltype=CL:0000117!1.54e-17!23;CL:0000337!1.54e-17!23;CL:0000540!6.11e-11!33;CL:0000047!6.11e-11!33;CL:0000031!6.11e-11!33;CL:0000404!6.11e-11!33;CL:0000393!3.48e-08!39;CL:0000211!3.48e-08!39;CL:0002319!8.12e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.71e-27,23;CL:0000337,3.71e-27,23;CL:0000540,2.50e-17,33;CL:0000047,2.50e-17,33;CL:0000031,2.50e-17,33;CL:0000404,2.50e-17,33;CL:0000393,7.17e-14,39;CL:0000211,7.17e-14,39;CL:0002319,4.13e-12,43;CL:0000221,1.01e-11,44;CL:0000133,1.01e-11,44;CL:0002609,9.14e-10,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!8.77e-29!34;UBERON:0001049!1.38e-28!52;UBERON:0005068!1.38e-28!52;UBERON:0006241!1.38e-28!52;UBERON:0007135!1.38e-28!52;UBERON:0000033!1.81e-28!63;UBERON:0002346!7.10e-27!71;UBERON:0003075!7.10e-27!71;UBERON:0007284!7.10e-27!71;UBERON:0003056!1.76e-26!49;UBERON:0000955!7.95e-25!50;UBERON:0006238!7.95e-25!50;UBERON:0001017!9.69e-25!73;UBERON:0005743!9.69e-25!73;UBERON:0002616!7.10e-24!49;UBERON:0000073!1.26e-23!75;UBERON:0001016!1.26e-23!75;UBERON:0002791!1.40e-23!29;UBERON:0003528!1.40e-23!29;UBERON:0001893!1.40e-23!29;UBERON:0003080!2.79e-21!40;UBERON:0004121!1.30e-20!102;UBERON:0000924!1.30e-20!102;UBERON:0006601!1.30e-20!102;UBERON:0002780!1.99e-20!39;UBERON:0001890!1.99e-20!39;UBERON:0006240!1.99e-20!39;UBERON:0000956!5.21e-18!21;UBERON:0001869!5.21e-18!21;UBERON:0000203!5.21e-18!21;UBERON:0007811!1.62e-16!86;UBERON:0002619!2.01e-14!17;UBERON:0000153!8.38e-14!94;UBERON:0002021!8.97e-13!10;UBERON:0000411!8.97e-13!10;UBERON:0001950!8.97e-13!10;UBERON:0003076!1.01e-07!12;UBERON:0003057!1.01e-07!12;UBERON:0002240!5.90e-07!6;UBERON:0005174!5.90e-07!6;UBERON:0001137!5.90e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.68e-49,34;UBERON:0000073,2.42e-46,54;UBERON:0001049,3.81e-43,52;UBERON:0005068,3.81e-43,52;UBERON:0006241,3.81e-43,52;UBERON:0007135,3.81e-43,52;UBERON:0003528,2.41e-40,29;UBERON:0002791,2.41e-40,29;UBERON:0001893,2.41e-40,29;UBERON:0001017,5.10e-38,73;UBERON:0000955,2.42e-37,47;UBERON:0006238,2.42e-37,47;UBERON:0002346,2.63e-37,64;UBERON:0003075,2.63e-37,64;UBERON:0007284,2.63e-37,64;UBERON:0001016,9.73e-37,75;UBERON:0002616,9.43e-36,46;UBERON:0003080,1.18e-34,40;UBERON:0002780,3.35e-33,39;UBERON:0001890,3.35e-33,39;UBERON:0006240,3.35e-33,39;UBERON:0010371,1.61e-31,73;UBERON:0003056,7.23e-31,49;UBERON:0000956,2.08e-30,21;UBERON:0001869,2.08e-30,21;UBERON:0000203,2.08e-30,21;UBERON:0004121,5.58e-30,95;UBERON:0000924,5.58e-30,95;UBERON:0006601,5.58e-30,95;UBERON:0002619,2.89e-24,17;UBERON:0010314,5.04e-23,92;UBERON:0002021,1.19e-20,10;UBERON:0000411,1.19e-20,10;UBERON:0001950,1.19e-20,10;UBERON:0000025,1.29e-14,114;UBERON:0004111,4.70e-13,122;UBERON:0002420,1.03e-10,8;UBERON:0007245,1.03e-10,8;UBERON:0010009,1.03e-10,8;UBERON:0010011,1.03e-10,8;UBERON:0000454,1.03e-10,8;UBERON:0000369,6.75e-10,5;UBERON:0002435,6.75e-10,5;UBERON:0000204,6.75e-10,5;UBERON:0010082,6.75e-10,5;UBERON:0001948,9.90e-10,5;UBERON:0002315,9.90e-10,5;UBERON:0003076,1.58e-08,12;UBERON:0003057,1.58e-08,12;UBERON:0011216,4.84e-08,194;UBERON:0002240,5.00e-08,6;UBERON:0005174,5.00e-08,6;UBERON:0001137,5.00e-08,6;UBERON:0000483,1.06e-07,174;UBERON:0000119,1.66e-07,176|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,4.7609188134483,0.633831403506179,0,0,0,0,0,0,0,2.28117147078651,1.21505344498522,1.89292465216244,3.14216082844184,3.09215957332259,2.32732518508413,1.0543001812006,3.67687514644008,0,2.42605942361857,2.4577045320999,3.69281605644543,5.03182039813253,5.73004707612436,1.3959149950069,0,1.22238598221448,4.12480019663135,6.97621235915604,4.65998614563251,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.04723353406728,0,0,0,0,1.9472783122627,5.49000723382352,3.26701315493447,8.8650403298061,7.16003280524926,2.49345653471472,3.89379031362618,0,0,0,0.210441855886474,0.260240885925407,0.919608417733892,0.360124259610698,0.452114453507145,0.476255494059295,1.15302348256365,0.468508622798644,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88811855979556,2.16099685996497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,1.60550589987792,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1187960654267,11.5081309126794,14.8952833494243,18.5601436931183,6.16574267793578,6.7985450765073,11.4753825039407,10.8077088773813,7.70342095273148,7.7664046762773,0,0.399024873401031,0.512200817262403,0.972426868273176,0.209613162627982,0.367687016900028,0.44449345560323,0.618105171716683,0.64183841918363,0.758091635291392,1.52087579934144,0.754505365544305,1.03005658216871,0.768301828858431,0.746661096422973,0,0.811190281613988,0.38581844092741,0,0.735994600671987,0.342869252385415,1.06485483695602,0.238436189947321,1.0174249164263,0.846984423737976,0.676916863133412,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.474540072496697,0.591026894253381,0.818462086339379,1.08455788830176,0.578719832943424,0.499621155875892,0.935726433781634,0.644613162144895,0.382576664137687,0,0.231867835620421|short_description=p13@Gpm6a}} | ||
|EntrezGene=234267 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt=P35802,Q542P2 | |||
|association_with_transcript=81bp_to_ENSMUST00000033915,NM_001253756,NM_153581,uc009lsl.2_5end | |||
|description=CAGE_peak_13_at_Gpm6a_5end | |||
|id=chr8:56040162..56040173,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.54e-17!23;CL:0000337!1.54e-17!23;CL:0000540!6.11e-11!33;CL:0000047!6.11e-11!33;CL:0000031!6.11e-11!33;CL:0000404!6.11e-11!33;CL:0000393!3.48e-08!39;CL:0000211!3.48e-08!39;CL:0002319!8.12e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.71e-27,23;CL:0000337,3.71e-27,23;CL:0000540,2.50e-17,33;CL:0000047,2.50e-17,33;CL:0000031,2.50e-17,33;CL:0000404,2.50e-17,33;CL:0000393,7.17e-14,39;CL:0000211,7.17e-14,39;CL:0002319,4.13e-12,43;CL:0000221,1.01e-11,44;CL:0000133,1.01e-11,44;CL:0002609,9.14e-10,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.77e-29!34;UBERON:0001049!1.38e-28!52;UBERON:0005068!1.38e-28!52;UBERON:0006241!1.38e-28!52;UBERON:0007135!1.38e-28!52;UBERON:0000033!1.81e-28!63;UBERON:0002346!7.10e-27!71;UBERON:0003075!7.10e-27!71;UBERON:0007284!7.10e-27!71;UBERON:0003056!1.76e-26!49;UBERON:0000955!7.95e-25!50;UBERON:0006238!7.95e-25!50;UBERON:0001017!9.69e-25!73;UBERON:0005743!9.69e-25!73;UBERON:0002616!7.10e-24!49;UBERON:0000073!1.26e-23!75;UBERON:0001016!1.26e-23!75;UBERON:0002791!1.40e-23!29;UBERON:0003528!1.40e-23!29;UBERON:0001893!1.40e-23!29;UBERON:0003080!2.79e-21!40;UBERON:0004121!1.30e-20!102;UBERON:0000924!1.30e-20!102;UBERON:0006601!1.30e-20!102;UBERON:0002780!1.99e-20!39;UBERON:0001890!1.99e-20!39;UBERON:0006240!1.99e-20!39;UBERON:0000956!5.21e-18!21;UBERON:0001869!5.21e-18!21;UBERON:0000203!5.21e-18!21;UBERON:0007811!1.62e-16!86;UBERON:0002619!2.01e-14!17;UBERON:0000153!8.38e-14!94;UBERON:0002021!8.97e-13!10;UBERON:0000411!8.97e-13!10;UBERON:0001950!8.97e-13!10;UBERON:0003076!1.01e-07!12;UBERON:0003057!1.01e-07!12;UBERON:0002240!5.90e-07!6;UBERON:0005174!5.90e-07!6;UBERON:0001137!5.90e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.68e-49,34;UBERON:0000073,2.42e-46,54;UBERON:0001049,3.81e-43,52;UBERON:0005068,3.81e-43,52;UBERON:0006241,3.81e-43,52;UBERON:0007135,3.81e-43,52;UBERON:0003528,2.41e-40,29;UBERON:0002791,2.41e-40,29;UBERON:0001893,2.41e-40,29;UBERON:0001017,5.10e-38,73;UBERON:0000955,2.42e-37,47;UBERON:0006238,2.42e-37,47;UBERON:0002346,2.63e-37,64;UBERON:0003075,2.63e-37,64;UBERON:0007284,2.63e-37,64;UBERON:0001016,9.73e-37,75;UBERON:0002616,9.43e-36,46;UBERON:0003080,1.18e-34,40;UBERON:0002780,3.35e-33,39;UBERON:0001890,3.35e-33,39;UBERON:0006240,3.35e-33,39;UBERON:0010371,1.61e-31,73;UBERON:0003056,7.23e-31,49;UBERON:0000956,2.08e-30,21;UBERON:0001869,2.08e-30,21;UBERON:0000203,2.08e-30,21;UBERON:0004121,5.58e-30,95;UBERON:0000924,5.58e-30,95;UBERON:0006601,5.58e-30,95;UBERON:0002619,2.89e-24,17;UBERON:0010314,5.04e-23,92;UBERON:0002021,1.19e-20,10;UBERON:0000411,1.19e-20,10;UBERON:0001950,1.19e-20,10;UBERON:0000025,1.29e-14,114;UBERON:0004111,4.70e-13,122;UBERON:0002420,1.03e-10,8;UBERON:0007245,1.03e-10,8;UBERON:0010009,1.03e-10,8;UBERON:0010011,1.03e-10,8;UBERON:0000454,1.03e-10,8;UBERON:0000369,6.75e-10,5;UBERON:0002435,6.75e-10,5;UBERON:0000204,6.75e-10,5;UBERON:0010082,6.75e-10,5;UBERON:0001948,9.90e-10,5;UBERON:0002315,9.90e-10,5;UBERON:0003076,1.58e-08,12;UBERON:0003057,1.58e-08,12;UBERON:0011216,4.84e-08,194;UBERON:0002240,5.00e-08,6;UBERON:0005174,5.00e-08,6;UBERON:0001137,5.00e-08,6;UBERON:0000483,1.06e-07,174;UBERON:0000119,1.66e-07,176 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,4.7609188134483,0.633831403506179,0,0,0,0,0,0,0,2.28117147078651,1.21505344498522,1.89292465216244,3.14216082844184,3.09215957332259,2.32732518508413,1.0543001812006,3.67687514644008,0,2.42605942361857,2.4577045320999,3.69281605644543,5.03182039813253,5.73004707612436,1.3959149950069,0,1.22238598221448,4.12480019663135,6.97621235915604,4.65998614563251,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75668478206928,1.04723353406728,0,0,0,0,1.9472783122627,5.49000723382352,3.26701315493447,8.8650403298061,7.16003280524926,2.49345653471472,3.89379031362618,0,0,0,0.210441855886474,0.260240885925407,0.919608417733892,0.360124259610698,0.452114453507145,0.476255494059295,1.15302348256365,0.468508622798644,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88811855979556,2.16099685996497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,1.60550589987792,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1187960654267,11.5081309126794,14.8952833494243,18.5601436931183,6.16574267793578,6.7985450765073,11.4753825039407,10.8077088773813,7.70342095273148,7.7664046762773,0,0.399024873401031,0.512200817262403,0.972426868273176,0.209613162627982,0.367687016900028,0.44449345560323,0.618105171716683,0.64183841918363,0.758091635291392,1.52087579934144,0.754505365544305,1.03005658216871,0.768301828858431,0.746661096422973,0,0.811190281613988,0.38581844092741,0,0.735994600671987,0.342869252385415,1.06485483695602,0.238436189947321,1.0174249164263,0.846984423737976,0.676916863133412,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.474540072496697,0.591026894253381,0.818462086339379,1.08455788830176,0.578719832943424,0.499621155875892,0.935726433781634,0.644613162144895,0.382576664137687,0,0.231867835620421 | |||
|short_description=p13@Gpm6a | |||
}} |
Revision as of 15:47, 14 September 2013
Short description: | p13@Gpm6a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Gpm6a_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 81bp_to_ENSMUST00000033915, NM_001253756, NM_153581, uc009lsl.2_5end |
EntrezGene: | Gpm6a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.71e-27 | 23 |
neuroblast (sensu Vertebrata) | 3.71e-27 | 23 |
neuron | 2.50e-17 | 33 |
neuronal stem cell | 2.50e-17 | 33 |
neuroblast | 2.50e-17 | 33 |
electrically signaling cell | 2.50e-17 | 33 |
electrically responsive cell | 7.17e-14 | 39 |
electrically active cell | 7.17e-14 | 39 |
neural cell | 4.13e-12 | 43 |
ectodermal cell | 1.01e-11 | 44 |
neurectodermal cell | 1.01e-11 | 44 |
neuron of cerebral cortex | 9.14e-10 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.