FFCP PHASE1:Mm9::chrX:100381841..100381862,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17954|HGNC=|MCL_coexpression_id=20|UniProt=P51860|association_with_transcript=116bp_to_ENSMUST00000121720_5end|description=CAGE_peak_3_at_Nap1l2_5end|id=chrX:100381841..100381862,-|ontology_enrichment_celltype=CL:0000540!1.45e-10!33;CL:0000047!1.45e-10!33;CL:0000031!1.45e-10!33;CL:0000404!1.45e-10!33;CL:0000117!4.05e-09!23;CL:0000337!4.05e-09!23;CL:0000393!2.15e-07!39;CL:0000211!2.15e-07!39;CL:0000221!5.55e-07!44;CL:0000133!5.55e-07!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.10e-19,23;CL:0000337,1.10e-19,23;CL:0000540,4.88e-16,33;CL:0000047,4.88e-16,33;CL:0000031,4.88e-16,33;CL:0000404,4.88e-16,33;CL:0000393,6.75e-13,39;CL:0000211,6.75e-13,39;CL:0002319,2.69e-11,43;CL:0000221,6.07e-11,44;CL:0000133,6.07e-11,44;CL:0002610,1.43e-07,3;CL:0002614,2.13e-07,3;CL:0002612,5.33e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.08e-28!71;UBERON:0003075!6.08e-28!71;UBERON:0007284!6.08e-28!71;UBERON:0004121!4.03e-26!102;UBERON:0000924!4.03e-26!102;UBERON:0006601!4.03e-26!102;UBERON:0000073!9.63e-26!75;UBERON:0001016!9.63e-26!75;UBERON:0001017!1.09e-25!73;UBERON:0005743!1.09e-25!73;UBERON:0000033!4.04e-24!63;UBERON:0001049!9.23e-22!52;UBERON:0005068!9.23e-22!52;UBERON:0006241!9.23e-22!52;UBERON:0007135!9.23e-22!52;UBERON:0000955!2.51e-20!50;UBERON:0006238!2.51e-20!50;UBERON:0002616!1.25e-19!49;UBERON:0003056!2.76e-19!49;UBERON:0003080!1.46e-15!40;UBERON:0002780!9.32e-15!39;UBERON:0001890!9.32e-15!39;UBERON:0006240!9.32e-15!39;UBERON:0007811!3.19e-13!86;UBERON:0002020!3.68e-13!34;UBERON:0000153!4.49e-12!94;UBERON:0002791!6.99e-10!29;UBERON:0003528!6.99e-10!29;UBERON:0001893!6.99e-10!29;UBERON:0002021!1.93e-08!10;UBERON:0000411!1.93e-08!10;UBERON:0001950!1.93e-08!10;UBERON:0003076!6.02e-07!12;UBERON:0003057!6.02e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.04e-42,54;UBERON:0001017,1.44e-41,73;UBERON:0001016,3.14e-40,75;UBERON:0001049,3.27e-38,52;UBERON:0005068,3.27e-38,52;UBERON:0006241,3.27e-38,52;UBERON:0007135,3.27e-38,52;UBERON:0002346,1.64e-31,64;UBERON:0003075,1.64e-31,64;UBERON:0007284,1.64e-31,64;UBERON:0004121,6.26e-30,95;UBERON:0000924,6.26e-30,95;UBERON:0006601,6.26e-30,95;UBERON:0002020,9.25e-30,34;UBERON:0000955,1.67e-29,47;UBERON:0006238,1.67e-29,47;UBERON:0002616,5.72e-28,46;UBERON:0010371,1.23e-26,73;UBERON:0003080,2.15e-22,40;UBERON:0003528,1.72e-21,29;UBERON:0002791,1.72e-21,29;UBERON:0001893,1.72e-21,29;UBERON:0002780,1.11e-20,39;UBERON:0001890,1.11e-20,39;UBERON:0006240,1.11e-20,39;UBERON:0010314,1.79e-19,92;UBERON:0002021,4.09e-19,10;UBERON:0000411,4.09e-19,10;UBERON:0001950,4.09e-19,10;UBERON:0003056,3.22e-17,49;UBERON:0003076,3.30e-17,12;UBERON:0003057,3.30e-17,12;UBERON:0000025,3.87e-13,114;UBERON:0002619,1.04e-12,17;UBERON:0002240,1.51e-12,6;UBERON:0005174,1.51e-12,6;UBERON:0001137,1.51e-12,6;UBERON:0000956,5.86e-12,21;UBERON:0001869,5.86e-12,21;UBERON:0000203,5.86e-12,21;UBERON:0004111,9.16e-12,122;UBERON:0002420,1.18e-11,8;UBERON:0007245,1.18e-11,8;UBERON:0010009,1.18e-11,8;UBERON:0010011,1.18e-11,8;UBERON:0000454,1.18e-11,8;UBERON:0001948,2.48e-10,5;UBERON:0002315,2.48e-10,5;UBERON:0011216,4.10e-10,194;UBERON:0002950,1.44e-09,4;UBERON:0001891,1.44e-09,4;UBERON:0009616,1.44e-09,4;UBERON:0010286,1.44e-09,4;UBERON:0004684,1.43e-07,3;UBERON:0002275,1.43e-07,3;UBERON:0002038,2.13e-07,3;UBERON:0009663,2.13e-07,3;UBERON:0009661,2.13e-07,3;UBERON:0000125,2.13e-07,3;UBERON:0002308,2.13e-07,3;UBERON:0002257,5.33e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,2.53532561402472,0,0,0,0,0,0,0,0,0,0.210324961351382,3.14216082844184,2.42955395046775,0.122490799214954,0,0,4.40463523997555,4.72443150915195,8.44835932909339,1.05509030184155,1.37231465403614,2.6045668527838,6.97957497503452,3.37657566019008,5.50073691996516,5.00868595305235,4.12877874317399,2.23679334990361,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.593768556259299,0,0,0.691846491768175,0.753613202763113,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,6.14839673724249,7.33063473847093,0,0,0,0,9.43681028250383,1.37250180845588,0.251308704225729,5.73620256634512,3.58001640262463,6.2336413367868,4.70499662896497,0.509196819251581,0.124406970610093,0,0.420883711772948,0.260240885925407,0.919608417733892,0.540186389416048,0.753524089178575,0.680364991513279,0.640568601424249,0.468508622798644,0.258703370739016,0.215567992932842,0.567318240503458,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,3.99550902271842,0.823236899034275,0,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690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| ||
|EntrezGene=17954 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=P51860 | |||
|association_with_transcript=116bp_to_ENSMUST00000121720_5end | |||
|description=CAGE_peak_3_at_Nap1l2_5end | |||
|id=chrX:100381841..100381862,- | |||
|ontology_enrichment_celltype=CL:0000540!1.45e-10!33;CL:0000047!1.45e-10!33;CL:0000031!1.45e-10!33;CL:0000404!1.45e-10!33;CL:0000117!4.05e-09!23;CL:0000337!4.05e-09!23;CL:0000393!2.15e-07!39;CL:0000211!2.15e-07!39;CL:0000221!5.55e-07!44;CL:0000133!5.55e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.10e-19,23;CL:0000337,1.10e-19,23;CL:0000540,4.88e-16,33;CL:0000047,4.88e-16,33;CL:0000031,4.88e-16,33;CL:0000404,4.88e-16,33;CL:0000393,6.75e-13,39;CL:0000211,6.75e-13,39;CL:0002319,2.69e-11,43;CL:0000221,6.07e-11,44;CL:0000133,6.07e-11,44;CL:0002610,1.43e-07,3;CL:0002614,2.13e-07,3;CL:0002612,5.33e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.08e-28!71;UBERON:0003075!6.08e-28!71;UBERON:0007284!6.08e-28!71;UBERON:0004121!4.03e-26!102;UBERON:0000924!4.03e-26!102;UBERON:0006601!4.03e-26!102;UBERON:0000073!9.63e-26!75;UBERON:0001016!9.63e-26!75;UBERON:0001017!1.09e-25!73;UBERON:0005743!1.09e-25!73;UBERON:0000033!4.04e-24!63;UBERON:0001049!9.23e-22!52;UBERON:0005068!9.23e-22!52;UBERON:0006241!9.23e-22!52;UBERON:0007135!9.23e-22!52;UBERON:0000955!2.51e-20!50;UBERON:0006238!2.51e-20!50;UBERON:0002616!1.25e-19!49;UBERON:0003056!2.76e-19!49;UBERON:0003080!1.46e-15!40;UBERON:0002780!9.32e-15!39;UBERON:0001890!9.32e-15!39;UBERON:0006240!9.32e-15!39;UBERON:0007811!3.19e-13!86;UBERON:0002020!3.68e-13!34;UBERON:0000153!4.49e-12!94;UBERON:0002791!6.99e-10!29;UBERON:0003528!6.99e-10!29;UBERON:0001893!6.99e-10!29;UBERON:0002021!1.93e-08!10;UBERON:0000411!1.93e-08!10;UBERON:0001950!1.93e-08!10;UBERON:0003076!6.02e-07!12;UBERON:0003057!6.02e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.04e-42,54;UBERON:0001017,1.44e-41,73;UBERON:0001016,3.14e-40,75;UBERON:0001049,3.27e-38,52;UBERON:0005068,3.27e-38,52;UBERON:0006241,3.27e-38,52;UBERON:0007135,3.27e-38,52;UBERON:0002346,1.64e-31,64;UBERON:0003075,1.64e-31,64;UBERON:0007284,1.64e-31,64;UBERON:0004121,6.26e-30,95;UBERON:0000924,6.26e-30,95;UBERON:0006601,6.26e-30,95;UBERON:0002020,9.25e-30,34;UBERON:0000955,1.67e-29,47;UBERON:0006238,1.67e-29,47;UBERON:0002616,5.72e-28,46;UBERON:0010371,1.23e-26,73;UBERON:0003080,2.15e-22,40;UBERON:0003528,1.72e-21,29;UBERON:0002791,1.72e-21,29;UBERON:0001893,1.72e-21,29;UBERON:0002780,1.11e-20,39;UBERON:0001890,1.11e-20,39;UBERON:0006240,1.11e-20,39;UBERON:0010314,1.79e-19,92;UBERON:0002021,4.09e-19,10;UBERON:0000411,4.09e-19,10;UBERON:0001950,4.09e-19,10;UBERON:0003056,3.22e-17,49;UBERON:0003076,3.30e-17,12;UBERON:0003057,3.30e-17,12;UBERON:0000025,3.87e-13,114;UBERON:0002619,1.04e-12,17;UBERON:0002240,1.51e-12,6;UBERON:0005174,1.51e-12,6;UBERON:0001137,1.51e-12,6;UBERON:0000956,5.86e-12,21;UBERON:0001869,5.86e-12,21;UBERON:0000203,5.86e-12,21;UBERON:0004111,9.16e-12,122;UBERON:0002420,1.18e-11,8;UBERON:0007245,1.18e-11,8;UBERON:0010009,1.18e-11,8;UBERON:0010011,1.18e-11,8;UBERON:0000454,1.18e-11,8;UBERON:0001948,2.48e-10,5;UBERON:0002315,2.48e-10,5;UBERON:0011216,4.10e-10,194;UBERON:0002950,1.44e-09,4;UBERON:0001891,1.44e-09,4;UBERON:0009616,1.44e-09,4;UBERON:0010286,1.44e-09,4;UBERON:0004684,1.43e-07,3;UBERON:0002275,1.43e-07,3;UBERON:0002038,2.13e-07,3;UBERON:0009663,2.13e-07,3;UBERON:0009661,2.13e-07,3;UBERON:0000125,2.13e-07,3;UBERON:0002308,2.13e-07,3;UBERON:0002257,5.33e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,2.53532561402472,0,0,0,0,0,0,0,0,0,0.210324961351382,3.14216082844184,2.42955395046775,0.122490799214954,0,0,4.40463523997555,4.72443150915195,8.44835932909339,1.05509030184155,1.37231465403614,2.6045668527838,6.97957497503452,3.37657566019008,5.50073691996516,5.00868595305235,4.12877874317399,2.23679334990361,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.422530259330042,0,0,0,0,0,0,0.34255163915718,0,0.593768556259299,0,0,0.691846491768175,0.753613202763113,0.470354828542819,0.125666591329675,0,0,0,0,0,0,0,6.14839673724249,7.33063473847093,0,0,0,0,9.43681028250383,1.37250180845588,0.251308704225729,5.73620256634512,3.58001640262463,6.2336413367868,4.70499662896497,0.509196819251581,0.124406970610093,0,0.420883711772948,0.260240885925407,0.919608417733892,0.540186389416048,0.753524089178575,0.680364991513279,0.640568601424249,0.468508622798644,0.258703370739016,0.215567992932842,0.567318240503458,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,3.99550902271842,0.823236899034275,0,0,0,0.464473343720877,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,14.7706542788769,13.1277088983268,0,0,0.315508219416257,0.780877488593277,1.07711698866399,0.238968797952552,0,0,1.61924280669958,0.584511715822624,0.395287777946524,2.57057053137446,0,0.178065603667255,0.325773918707152,0.164970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,1.02131881726136,0.720244376125241,0.646793418913773,0.643011105094777,0.354680467284547,0.891844088010353,0.493647061806363,0.304464949114599,0,0,0.220528398054962,0,0,0,0,0,0,15.2048747648618,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0,0.209088296014469,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0.299033092087958,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,2.82375921308533,3.68260189205742,1.14579102687879,2.749650917499,6.16574267793578,7.55393897389701,4.05013500139084,1.35096360967266,3.62513927187364,2.07104124700728,0.93408612825759,0,1.02440163452481,0.243106717068294,0.419226325255965,0.367687016900028,0,0.206035057238894,0,0,0.25347929989024,0.565879024158229,0.280924522409647,0.192075457214608,0.34461281373368,0.476293691283074,0.463537303779422,0.38581844092741,0.824171801606613,0,0,0.532427418478012,0.238436189947321,0.290692833264657,0.564656282491984,0.423073039458382,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.355905054372522,0.197008964751127,0.409231043169689,0.929621047115796,0.578719832943424,0.499621155875892,0.701794825336225,0,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p3@Nap1l2 | |||
}} |
Revision as of 19:09, 14 September 2013
Short description: | p3@Nap1l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nap1l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 116bp_to_ENSMUST00000121720_5end |
EntrezGene: | Nap1l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.10e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.10e-19 | 23 |
neuron | 4.88e-16 | 33 |
neuronal stem cell | 4.88e-16 | 33 |
neuroblast | 4.88e-16 | 33 |
electrically signaling cell | 4.88e-16 | 33 |
electrically responsive cell | 6.75e-13 | 39 |
electrically active cell | 6.75e-13 | 39 |
neural cell | 2.69e-11 | 43 |
ectodermal cell | 6.07e-11 | 44 |
neurectodermal cell | 6.07e-11 | 44 |
raphe nuclei neuron | 1.43e-07 | 3 |
neuron of the substantia nigra | 2.13e-07 | 3 |
neuron of the ventral spinal cord | 5.33e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.