FFCP PHASE1:Mm9::chrX:70748456..70748474,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=320707|HGNC=|MCL_coexpression_id=1|UniProt=Q8C048,Q0VF55,A2ALL9|association_with_transcript=31bp_to_ENSMUST00000033744,ENSMUST00000088429,ENSMUST00000114479,NM_177236,uc009tlz.1_5end|description=CAGE_peak_5_at_Atp2b3_5end|id=chrX:70748456..70748474,+|ontology_enrichment_celltype=CL:0000540!1.98e-16!33;CL:0000047!1.98e-16!33;CL:0000031!1.98e-16!33;CL:0000404!1.98e-16!33;CL:0000117!2.12e-13!23;CL:0000337!2.12e-13!23;CL:0000393!2.08e-12!39;CL:0000211!2.08e-12!39;CL:0000221!1.11e-10!44;CL:0000133!1.11e-10!44;CL:0002319!2.14e-10!43;CL:0000055!9.94e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.10e-13,23;CL:0000337,7.10e-13,23;CL:0000540,1.90e-09,33;CL:0000047,1.90e-09,33;CL:0000031,1.90e-09,33;CL:0000404,1.90e-09,33;CL:0002610,1.42e-07,3;CL:0000393,1.56e-07,39;CL:0000211,1.56e-07,39;CL:0002614,2.13e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.91e-27!73;UBERON:0005743!2.91e-27!73;UBERON:0000073!5.13e-26!75;UBERON:0001016!5.13e-26!75;UBERON:0004121!6.44e-26!102;UBERON:0000924!6.44e-26!102;UBERON:0006601!6.44e-26!102;UBERON:0002346!3.97e-23!71;UBERON:0003075!3.97e-23!71;UBERON:0007284!3.97e-23!71;UBERON:0002020!2.41e-20!34;UBERON:0001049!3.08e-20!52;UBERON:0005068!3.08e-20!52;UBERON:0006241!3.08e-20!52;UBERON:0007135!3.08e-20!52;UBERON:0000955!8.47e-19!50;UBERON:0006238!8.47e-19!50;UBERON:0002616!4.92e-18!49;UBERON:0000033!1.39e-17!63;UBERON:0002791!3.73e-16!29;UBERON:0003528!3.73e-16!29;UBERON:0001893!3.73e-16!29;UBERON:0003080!3.98e-13!40;UBERON:0002780!2.87e-12!39;UBERON:0001890!2.87e-12!39;UBERON:0006240!2.87e-12!39;UBERON:0003056!2.12e-11!49;UBERON:0002021!5.47e-11!10;UBERON:0000411!5.47e-11!10;UBERON:0001950!5.47e-11!10;UBERON:0000956!6.59e-10!21;UBERON:0001869!6.59e-10!21;UBERON:0000203!6.59e-10!21;UBERON:0007811!3.59e-09!86;UBERON:0002619!6.38e-09!17;UBERON:0003076!3.16e-08!12;UBERON:0003057!3.16e-08!12;UBERON:0002420!7.12e-08!8;UBERON:0007245!7.12e-08!8;UBERON:0010009!7.12e-08!8;UBERON:0010011!7.12e-08!8;UBERON:0000454!7.12e-08!8;UBERON:0000153!2.46e-07!94;UBERON:0002298!2.90e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.62e-37,54;UBERON:0001017,7.83e-35,73;UBERON:0001016,1.09e-33,75;UBERON:0001049,4.72e-33,52;UBERON:0005068,4.72e-33,52;UBERON:0006241,4.72e-33,52;UBERON:0007135,4.72e-33,52;UBERON:0002020,8.38e-27,34;UBERON:0002346,1.68e-25,64;UBERON:0003075,1.68e-25,64;UBERON:0007284,1.68e-25,64;UBERON:0000955,4.23e-25,47;UBERON:0006238,4.23e-25,47;UBERON:0004121,6.71e-25,95;UBERON:0000924,6.71e-25,95;UBERON:0006601,6.71e-25,95;UBERON:0002616,1.13e-23,46;UBERON:0002021,1.20e-21,10;UBERON:0000411,1.20e-21,10;UBERON:0001950,1.20e-21,10;UBERON:0010371,1.81e-21,73;UBERON:0003528,5.91e-19,29;UBERON:0002791,5.91e-19,29;UBERON:0001893,5.91e-19,29;UBERON:0003080,2.78e-18,40;UBERON:0010314,4.14e-18,92;UBERON:0003076,6.37e-17,12;UBERON:0003057,6.37e-17,12;UBERON:0002780,1.06e-16,39;UBERON:0001890,1.06e-16,39;UBERON:0006240,1.06e-16,39;UBERON:0002619,1.56e-14,17;UBERON:0003056,5.30e-14,49;UBERON:0000956,1.71e-13,21;UBERON:0001869,1.71e-13,21;UBERON:0000203,1.71e-13,21;UBERON:0002240,4.89e-12,6;UBERON:0005174,4.89e-12,6;UBERON:0001137,4.89e-12,6;UBERON:0000025,3.59e-11,114;UBERON:0001948,3.89e-10,5;UBERON:0002315,3.89e-10,5;UBERON:0004111,5.65e-10,122;UBERON:0002950,1.38e-09,4;UBERON:0001891,1.38e-09,4;UBERON:0009616,1.38e-09,4;UBERON:0010286,1.38e-09,4;UBERON:0011216,9.97e-09,194;UBERON:0004684,1.42e-07,3;UBERON:0002275,1.42e-07,3;UBERON:0002038,2.13e-07,3;UBERON:0009663,2.13e-07,3;UBERON:0009661,2.13e-07,3;UBERON:0000125,2.13e-07,3;UBERON:0002308,2.13e-07,3;UBERON:0004733,7.97e-07,6;UBERON:0004732,7.97e-07,6;UBERON:0002028,7.97e-07,6;UBERON:0007277,7.97e-07,6|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,3.42781181284564,2.65042249141936,0.367472397644862,0,0,4.40463523997555,4.97980618532232,4.76180253094355,0.791317726381163,0.731901148819277,0.52091337055676,5.862842979029,2.8138130501584,3.20876320331301,2.35702868378934,2.27794689278565,1.4911955666024,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,1.33597925158342,0,0.304465478312141,0.461230994512117,0.753613202763113,0.23517741427141,1.25666591329675,0,0,0,1.13236794963186,0.220841518460394,0,0,6.44117753425404,12.9856958224342,0,0,0,0,5.69204429738326,5.03250663100489,1.00523481690292,3.99795936442236,4.85859368927628,2.28566849015516,5.353961681236,0,0.248813941220186,0.505445516867349,0.210441855886474,0,0,0,0,0,0,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46753866266731,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97706828962155,5.15731421005694,0,0.252470927204373,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0,1.13230612315533,0,0.584511715822624,0.395287777946524,1.92792789853084,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,2.82375921308533,2.30162618253588,4.01026859407578,6.70227411140382,2.74033007908257,6.7985450765073,5.40018000185445,4.5032120322422,4.53142408984205,7.7664046762773,0,0,0,0.486213434136588,0.209613162627982,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0.448176066834085,0.34461281373368,0.476293691283074,0.347652977834566,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.492522411877817,0,0.154936841185966,0.192906610981141,0,0,0,0.382576664137687,0.220591419119515,0|short_description=p5@Atp2b3}} | ||
|EntrezGene=320707 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q8C048,Q0VF55,A2ALL9 | |||
|association_with_transcript=31bp_to_ENSMUST00000033744,ENSMUST00000088429,ENSMUST00000114479,NM_177236,uc009tlz.1_5end | |||
|description=CAGE_peak_5_at_Atp2b3_5end | |||
|id=chrX:70748456..70748474,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.98e-16!33;CL:0000047!1.98e-16!33;CL:0000031!1.98e-16!33;CL:0000404!1.98e-16!33;CL:0000117!2.12e-13!23;CL:0000337!2.12e-13!23;CL:0000393!2.08e-12!39;CL:0000211!2.08e-12!39;CL:0000221!1.11e-10!44;CL:0000133!1.11e-10!44;CL:0002319!2.14e-10!43;CL:0000055!9.94e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.10e-13,23;CL:0000337,7.10e-13,23;CL:0000540,1.90e-09,33;CL:0000047,1.90e-09,33;CL:0000031,1.90e-09,33;CL:0000404,1.90e-09,33;CL:0002610,1.42e-07,3;CL:0000393,1.56e-07,39;CL:0000211,1.56e-07,39;CL:0002614,2.13e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.91e-27!73;UBERON:0005743!2.91e-27!73;UBERON:0000073!5.13e-26!75;UBERON:0001016!5.13e-26!75;UBERON:0004121!6.44e-26!102;UBERON:0000924!6.44e-26!102;UBERON:0006601!6.44e-26!102;UBERON:0002346!3.97e-23!71;UBERON:0003075!3.97e-23!71;UBERON:0007284!3.97e-23!71;UBERON:0002020!2.41e-20!34;UBERON:0001049!3.08e-20!52;UBERON:0005068!3.08e-20!52;UBERON:0006241!3.08e-20!52;UBERON:0007135!3.08e-20!52;UBERON:0000955!8.47e-19!50;UBERON:0006238!8.47e-19!50;UBERON:0002616!4.92e-18!49;UBERON:0000033!1.39e-17!63;UBERON:0002791!3.73e-16!29;UBERON:0003528!3.73e-16!29;UBERON:0001893!3.73e-16!29;UBERON:0003080!3.98e-13!40;UBERON:0002780!2.87e-12!39;UBERON:0001890!2.87e-12!39;UBERON:0006240!2.87e-12!39;UBERON:0003056!2.12e-11!49;UBERON:0002021!5.47e-11!10;UBERON:0000411!5.47e-11!10;UBERON:0001950!5.47e-11!10;UBERON:0000956!6.59e-10!21;UBERON:0001869!6.59e-10!21;UBERON:0000203!6.59e-10!21;UBERON:0007811!3.59e-09!86;UBERON:0002619!6.38e-09!17;UBERON:0003076!3.16e-08!12;UBERON:0003057!3.16e-08!12;UBERON:0002420!7.12e-08!8;UBERON:0007245!7.12e-08!8;UBERON:0010009!7.12e-08!8;UBERON:0010011!7.12e-08!8;UBERON:0000454!7.12e-08!8;UBERON:0000153!2.46e-07!94;UBERON:0002298!2.90e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.62e-37,54;UBERON:0001017,7.83e-35,73;UBERON:0001016,1.09e-33,75;UBERON:0001049,4.72e-33,52;UBERON:0005068,4.72e-33,52;UBERON:0006241,4.72e-33,52;UBERON:0007135,4.72e-33,52;UBERON:0002020,8.38e-27,34;UBERON:0002346,1.68e-25,64;UBERON:0003075,1.68e-25,64;UBERON:0007284,1.68e-25,64;UBERON:0000955,4.23e-25,47;UBERON:0006238,4.23e-25,47;UBERON:0004121,6.71e-25,95;UBERON:0000924,6.71e-25,95;UBERON:0006601,6.71e-25,95;UBERON:0002616,1.13e-23,46;UBERON:0002021,1.20e-21,10;UBERON:0000411,1.20e-21,10;UBERON:0001950,1.20e-21,10;UBERON:0010371,1.81e-21,73;UBERON:0003528,5.91e-19,29;UBERON:0002791,5.91e-19,29;UBERON:0001893,5.91e-19,29;UBERON:0003080,2.78e-18,40;UBERON:0010314,4.14e-18,92;UBERON:0003076,6.37e-17,12;UBERON:0003057,6.37e-17,12;UBERON:0002780,1.06e-16,39;UBERON:0001890,1.06e-16,39;UBERON:0006240,1.06e-16,39;UBERON:0002619,1.56e-14,17;UBERON:0003056,5.30e-14,49;UBERON:0000956,1.71e-13,21;UBERON:0001869,1.71e-13,21;UBERON:0000203,1.71e-13,21;UBERON:0002240,4.89e-12,6;UBERON:0005174,4.89e-12,6;UBERON:0001137,4.89e-12,6;UBERON:0000025,3.59e-11,114;UBERON:0001948,3.89e-10,5;UBERON:0002315,3.89e-10,5;UBERON:0004111,5.65e-10,122;UBERON:0002950,1.38e-09,4;UBERON:0001891,1.38e-09,4;UBERON:0009616,1.38e-09,4;UBERON:0010286,1.38e-09,4;UBERON:0011216,9.97e-09,194;UBERON:0004684,1.42e-07,3;UBERON:0002275,1.42e-07,3;UBERON:0002038,2.13e-07,3;UBERON:0009663,2.13e-07,3;UBERON:0009661,2.13e-07,3;UBERON:0000125,2.13e-07,3;UBERON:0002308,2.13e-07,3;UBERON:0004733,7.97e-07,6;UBERON:0004732,7.97e-07,6;UBERON:0002028,7.97e-07,6;UBERON:0007277,7.97e-07,6 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,1.26766280701236,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,3.42781181284564,2.65042249141936,0.367472397644862,0,0,4.40463523997555,4.97980618532232,4.76180253094355,0.791317726381163,0.731901148819277,0.52091337055676,5.862842979029,2.8138130501584,3.20876320331301,2.35702868378934,2.27794689278565,1.4911955666024,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,0,1.33597925158342,0,0.304465478312141,0.461230994512117,0.753613202763113,0.23517741427141,1.25666591329675,0,0,0,1.13236794963186,0.220841518460394,0,0,6.44117753425404,12.9856958224342,0,0,0,0,5.69204429738326,5.03250663100489,1.00523481690292,3.99795936442236,4.85859368927628,2.28566849015516,5.353961681236,0,0.248813941220186,0.505445516867349,0.210441855886474,0,0,0,0,0,0,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46753866266731,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97706828962155,5.15731421005694,0,0.252470927204373,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0,1.13230612315533,0,0.584511715822624,0.395287777946524,1.92792789853084,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0,0,4.07935664423121,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.104859344425711,0,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,2.82375921308533,2.30162618253588,4.01026859407578,6.70227411140382,2.74033007908257,6.7985450765073,5.40018000185445,4.5032120322422,4.53142408984205,7.7664046762773,0,0,0,0.486213434136588,0.209613162627982,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0.448176066834085,0.34461281373368,0.476293691283074,0.347652977834566,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.338458431566706,0.182927972872773,0,0.271608227691724,0,0.355905054372522,0.492522411877817,0,0.154936841185966,0.192906610981141,0,0,0,0.382576664137687,0.220591419119515,0 | |||
|short_description=p5@Atp2b3 | |||
}} |
Revision as of 20:03, 14 September 2013
Short description: | p5@Atp2b3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Atp2b3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 31bp_to_ENSMUST00000033744, ENSMUST00000088429, ENSMUST00000114479, NM_177236, uc009tlz.1_5end |
EntrezGene: | Atp2b3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.10e-13 | 23 |
neuroblast (sensu Vertebrata) | 7.10e-13 | 23 |
neuron | 1.90e-09 | 33 |
neuronal stem cell | 1.90e-09 | 33 |
neuroblast | 1.90e-09 | 33 |
electrically signaling cell | 1.90e-09 | 33 |
raphe nuclei neuron | 1.42e-07 | 3 |
electrically responsive cell | 1.56e-07 | 39 |
electrically active cell | 1.56e-07 | 39 |
neuron of the substantia nigra | 2.13e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.