FFCP PHASE1:Hg19::chr1:2407754..2407773,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9651 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29037 | |||
|TSSclassifier=strong | |||
|UniProt=A6NGX9,O75038 | |||
|association_with_transcript=0bp_to_ENST00000288766,ENST00000378486,ENST00000378488,NM_014638,uc001aji.1_5end | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_2_at_PLCH2_5end | |||
|id=chr1:2407754..2407773,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.90e-09!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.91e-44;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!8.70e-23!2;UBERON:0002757!8.70e-23!2;UBERON:0010134!8.70e-23!2;UBERON:0002784!8.70e-23!2;UBERON:0005408!8.70e-23!2;UBERON:0001899!8.70e-23!2;UBERON:0003296!6.98e-12!4;UBERON:0010133!6.98e-12!4;UBERON:0002038!8.64e-12!1;UBERON:0009661!8.64e-12!1;UBERON:0000966!1.42e-09!5;UBERON:0005388!1.42e-09!5;UBERON:0001802!1.42e-09!5;UBERON:0000970!7.94e-09!20;UBERON:0002104!2.05e-08!21;UBERON:0000020!1.07e-07!23;UBERON:0001032!2.22e-07!24;UBERON:0004456!2.22e-07!24;UBERON:0001894!3.72e-07!7;UBERON:0006222!3.72e-07!7;UBERON:0003075!6.33e-07!86;UBERON:0007284!6.33e-07!86;UBERON:0005743!8.13e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.41e-67;2!UBERON:0002757;7.41e-67;2!UBERON:0010134;7.41e-67;2!UBERON:0005408;7.41e-67;2!UBERON:0001899;7.41e-67;2!UBERON:0003296;4.28e-34;4!UBERON:0010133;4.28e-34;4!UBERON:0002784;4.28e-34;4!UBERON:0000966;3.55e-27;5!UBERON:0005388;3.55e-27;5!UBERON:0001802;3.55e-27;5!UBERON:0001894;5.35e-20;7!UBERON:0002360;1.27e-17;2!UBERON:0000094;1.27e-17;2!UBERON:0010743;1.27e-17;2!UBERON:0000970;1.43e-15;20!UBERON:0002104;7.18e-15;21!UBERON:0000020;1.20e-13;23!UBERON:0001032;4.11e-13;24!UBERON:0004456;4.11e-13;24!UBERON:0000019;6.36e-08;19!UBERON:0000047;6.36e-08;19!UBERON:0004088;6.36e-08;19!UBERON:0010230;6.36e-08;19!UBERON:0001456;2.95e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.41e-67,2;UBERON:0002757,7.41e-67,2;UBERON:0010134,7.41e-67,2;UBERON:0005408,7.41e-67,2;UBERON:0001899,7.41e-67,2;UBERON:0003296,4.28e-34,4;UBERON:0010133,4.28e-34,4;UBERON:0002784,4.28e-34,4;UBERON:0000966,7.58e-23,6;UBERON:0005388,7.58e-23,6;UBERON:0001802,7.58e-23,6;UBERON:0001894,5.35e-20,7;UBERON:0006222,5.35e-20,7;UBERON:0002360,1.27e-17,2;UBERON:0000094,1.27e-17,2;UBERON:0010743,1.27e-17,2;UBERON:0000970,7.18e-15,21;UBERON:0002104,7.18e-15,21;UBERON:0000020,4.11e-13,24;UBERON:0001032,4.11e-13,24;UBERON:0004456,4.11e-13,24;UBERON:0003056,4.15e-09,61;UBERON:0000019,1.42e-07,20;UBERON:0000047,1.42e-07,20;UBERON:0010312,1.42e-07,20;UBERON:0004088,1.42e-07,20;UBERON:0010230,1.42e-07,20;UBERON:0003072,1.42e-07,20;UBERON:0004128,1.42e-07,20;UBERON:0003071,1.42e-07,20;UBERON:0001456,5.74e-07,22;UBERON:0003075,6.33e-07,82;UBERON:0007284,6.33e-07,82;UBERON:0001017,6.53e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.7225748177594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.7847431985064,46.0708699439789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5812150120379,9.00677586876542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0.157771562193185,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@PLCH2 | |||
}} |
Revision as of 15:55, 10 January 2014
Short description: | p2@PLCH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLCH2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000288766, ENST00000378486, ENST00000378488, NM_014638, uc001aji.1_5end |
EntrezGene: | PLCH2 |
HGNC: | 29037 |
UniProt: | A6NGX9O75038 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 7.41e-67 | 2 |
regional part of epithalamus | 7.41e-67 | 2 |
secretory circumventricular organ | 7.41e-67 | 2 |
circumventricular organ | 7.41e-67 | 2 |
epithalamus | 7.41e-67 | 2 |
gland of diencephalon | 4.28e-34 | 4 |
neuroendocrine gland | 4.28e-34 | 4 |
regional part of diencephalon | 4.28e-34 | 4 |
retina | 7.58e-23 | 6 |
photoreceptor array | 7.58e-23 | 6 |
posterior segment of eyeball | 7.58e-23 | 6 |
diencephalon | 5.35e-20 | 7 |
future diencephalon | 5.35e-20 | 7 |
meninx | 1.27e-17 | 2 |
membrane organ | 1.27e-17 | 2 |
meningeal cluster | 1.27e-17 | 2 |
eye | 7.18e-15 | 21 |
visual system | 7.18e-15 | 21 |
sense organ | 4.11e-13 | 24 |
sensory system | 4.11e-13 | 24 |
entire sense organ system | 4.11e-13 | 24 |
pre-chordal neural plate | 4.15e-09 | 61 |
camera-type eye | 1.42e-07 | 20 |
simple eye | 1.42e-07 | 20 |
immature eye | 1.42e-07 | 20 |
ocular region | 1.42e-07 | 20 |
eyeball of camera-type eye | 1.42e-07 | 20 |
optic cup | 1.42e-07 | 20 |
optic vesicle | 1.42e-07 | 20 |
eye primordium | 1.42e-07 | 20 |
face | 5.74e-07 | 22 |
neural plate | 6.33e-07 | 82 |
presumptive neural plate | 6.33e-07 | 82 |
central nervous system | 6.53e-07 | 81 |