FFCP PHASE1:Hg19::chr1:152483278..152483280,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=254910 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16614 | |||
|TSSclassifier=not | |||
|UniProt=Q5TCM9 | |||
|association_with_transcript=-39bp_to_ENST00000334269,NM_178438,uc001ezy.2_5end | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_LCE5A_5end | |||
|id=chr1:152483278..152483280,+ | |||
|ontology_enrichment_celltype=CL:0000312!2.52e-12!5;CL:0000240!1.99e-10!6;CL:0000311!1.99e-10!6;CL:0000079!1.99e-10!6;CL:0000237!1.99e-10!6;CL:0000036!1.99e-10!6;CL:0000357!1.99e-10!6;CL:0000114!1.99e-10!6;CL:0000362!4.83e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000312;3.60e-11;5!CL:0000240;1.57e-09;6!CL:0000311;1.57e-09;6!CL:0000079;1.57e-09;6!CL:0000237;1.57e-09;6!CL:0000362;8.85e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,3.60e-11,5;CL:0000240,1.57e-09,6;CL:0000311,1.57e-09,6;CL:0000079,1.57e-09,6;CL:0000237,1.57e-09,6;CL:0000036,1.57e-09,6;CL:0000357,1.57e-09,6;CL:0000114,1.57e-09,6;CL:0000362,8.85e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.42e-50;1!UBERON:0004874;3.99e-50;1!CL:0000357;1.57e-09;6!CL:0000114;1.57e-09;6 | |||
|ontology_enrichment_disease=DOID:178!1.54e-15!1;DOID:326!1.54e-15!1;DOID:3978!1.54e-15!1;DOID:3394!1.54e-15!1;DOID:5844!1.54e-15!1;DOID:114!2.00e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!6.50e-20!3;UBERON:0001033!6.50e-20!3;UBERON:0010056!6.50e-20!3;UBERON:0007029!5.56e-16!1;UBERON:0000989!7.46e-16!1;UBERON:0008811!7.46e-16!1;UBERON:0006258!7.46e-16!1;UBERON:0005876!7.46e-16!1;UBERON:0004874!7.46e-16!1;UBERON:0001003!7.95e-10!14;UBERON:0007376!7.95e-10!14;UBERON:0007383!7.95e-10!14;UBERON:0003127!3.08e-08!2;UBERON:0000078!9.90e-08!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;1.46e-50;1!UBERON:0000989;3.99e-50;1!UBERON:0008811;3.99e-50;1!UBERON:0001003;2.94e-14;15!UBERON:0007376;2.94e-14;15!UBERON:0000014;8.82e-14;4!UBERON:0010371;1.17e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,1.46e-50,1;UBERON:0000989,3.99e-50,1;UBERON:0008811,3.99e-50,1;UBERON:0006258,3.99e-50,1;UBERON:0005876,3.99e-50,1;UBERON:0004874,3.99e-50,1;UBERON:0001003,2.94e-14,15;UBERON:0007376,2.94e-14,15;UBERON:0007383,2.94e-14,15;UBERON:0000014,8.82e-14,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,1.1240175325762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.45074531906083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,67.0281170421612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0.684466602170562,0,0.0717222053926763,0,0,0,0,0,7.03922827210363,0,0.406896178315738,0,0,0 | |||
|short_description=p1@LCE5A | |||
}} |
Revision as of 20:55, 10 January 2014
Short description: | p1@LCE5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LCE5A_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -39bp_to_ENST00000334269, NM_178438, uc001ezy.2_5end |
EntrezGene: | LCE5A |
HGNC: | 16614 |
UniProt: | Q5TCM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 3.60e-11 | 5 |
stratified squamous epithelial cell | 1.57e-09 | 6 |
keratin accumulating cell | 1.57e-09 | 6 |
stratified epithelial cell | 1.57e-09 | 6 |
keratinizing barrier epithelial cell | 1.57e-09 | 6 |
epithelial fate stem cell | 1.57e-09 | 6 |
stratified epithelial stem cell | 1.57e-09 | 6 |
surface ectodermal cell | 1.57e-09 | 6 |
epidermal cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
surface | 1.46e-50 | 1 |
penis | 3.99e-50 | 1 |
intromittent organ | 3.99e-50 | 1 |
lateral plate mesenchyme | 3.99e-50 | 1 |
undifferentiated genital tubercle | 3.99e-50 | 1 |
somatopleure | 3.99e-50 | 1 |
skin epidermis | 2.94e-14 | 15 |
outer epithelium | 2.94e-14 | 15 |
enveloping layer of ectoderm | 2.94e-14 | 15 |
zone of skin | 8.82e-14 | 4 |